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{{UBERON
{{UBERON
|id=UBERON:0003835
|alt_id=
|name=abdominal segment blood vessel
|namespace=
|def="A blood vessel that is part of an abdominal segment of trunk [Obol]." [OBOL:automatic]
|xref=MA:0000524
|is_a=UBERON:0003513
|synonym="abdominal segment of trunk blood vessel" EXACT [OBOL:automatic];;"blood vessel of abdominal segment of trunk" EXACT [OBOL:automatic]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="A blood vessel that is part of an abdominal segment of trunk [Obol]." [OBOL:automatic]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0003835
|is_a=UBERON:0003513
|is_obsolete=
|located_in=
|located_in=
|part_of=
|name=abdominal segment blood vessel
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0002417
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="abdominal segment of trunk blood vessel" EXACT [OBOL:automatic];;"blood vessel of abdominal segment of trunk" EXACT [OBOL:automatic]
|union_of=
|xref=MA:0000524
}}
}}

Latest revision as of 17:41, 12 September 2014

Name:abdominal segment blood vessel
Namespace:FANTOM
Definition:"A blood vessel that is part of an abdominal segment of trunk [Obol]." [OBOL:automatic]
Xrefs:
links:
MA:0000524
Synonyms: "abdominal segment of trunk blood vessel" EXACT [OBOL:automatic]
"blood vessel of abdominal segment of trunk" EXACT [OBOL:automatic]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0003513(trunk blood vessel)
part_of:UBERON:0002417(abdominal segment of trunk)



Children

is a:UBERON:0003497 (abdomen blood vessel)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

  • 11521-119H9 (Hepatic Sinusoidal Endothelial Cells, donor1)
  • 11601-120H8 (Hepatic Sinusoidal Endothelial Cells, donor2)
  • 11682-122H8 (Hepatic Sinusoidal Endothelial Cells, donor3)
  • 11830-124G3 (Mouse hepatic Sinusoidal Endothelial Cells, donor1)
  • 11831-124G4
  • 11832-124G5
  • 13595-146E4 (liver sinusoidal endothelial cells, sham operation, biol_rep1)
  • 13596-146E5 (liver sinusoidal endothelial cells, sham operation, biol_rep2)
  • 13597-146E6 (liver sinusoidal endothelial cells, sham operation, biol_rep3)
  • 13598-146E7 (liver sinusoidal endothelial cells, partial hepatectomy, 02hr, biol_rep1)

... further results Mouse (Mus musculus)

  • 11521-119H9 (Hepatic Sinusoidal Endothelial Cells, donor1)
  • 11601-120H8 (Hepatic Sinusoidal Endothelial Cells, donor2)
  • 11682-122H8 (Hepatic Sinusoidal Endothelial Cells, donor3)
  • 11830-124G3 (Mouse hepatic Sinusoidal Endothelial Cells, donor1)
  • 11831-124G4
  • 11832-124G5
  • 13595-146E4 (liver sinusoidal endothelial cells, sham operation, biol_rep1)
  • 13596-146E5 (liver sinusoidal endothelial cells, sham operation, biol_rep2)
  • 13597-146E6 (liver sinusoidal endothelial cells, sham operation, biol_rep3)
  • 13598-146E7 (liver sinusoidal endothelial cells, partial hepatectomy, 02hr, biol_rep1)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003835 (abdominal segment blood vessel), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
8.99e-131FFCP PHASE1:Hg19::chr7:158330204..158330217,+#_dd3bfdb2d1dce4fcfa71f3df476d6b16p2@ENST00000448698
8.99e-131FFCP PHASE2:Hg19::chr7:158330204..158330217,+#_dd3bfdb2d1dce4fcfa71f3df476d6b16p2@ENST00000448698
3.07e-86FFCP PHASE1:Mm9::chr9:42915185..42915192,-#_d8e39b4f3edc4301b0d316aab64dbb70p@chr9:42915185..42915192, -
3.07e-86FFCP PHASE2:Mm9::chr17:35093377..35093381,+#_d8e39b4f3edc4301b0d316aab64dbb70p@chr17:35093377..35093381, +
3.07e-86FFCP PHASE2:Mm9::chr2:129407463..129407468,-#_d8e39b4f3edc4301b0d316aab64dbb70p@chr2:129407463..129407468, -
3.07e-86FFCP PHASE1:Mm9::chr3:104857794..104857802,-#_d8e39b4f3edc4301b0d316aab64dbb70p@chr3:104857794..104857802, -
3.07e-86FFCP PHASE2:Mm9::chr6:91441074..91441080,-#_d8e39b4f3edc4301b0d316aab64dbb70p@chr6:91441074..91441080, -
3.07e-86FFCP PHASE1:Mm9::chr16:85547242..85547252,+#_d8e39b4f3edc4301b0d316aab64dbb70p@chr16:85547242..85547252, +
3.07e-86FFCP PHASE1:Mm9::chr15:59435855..59435878,-#_d8e39b4f3edc4301b0d316aab64dbb70p@chr15:59435855..59435878, -
3.07e-86FFCP PHASE2:Mm9::chr4:141645056..141645068,+#_d8e39b4f3edc4301b0d316aab64dbb70p@chr4:141645056..141645068, +
3.07e-86FFCP PHASE1:Mm9::chr8:25530071..25530072,+#_d8e39b4f3edc4301b0d316aab64dbb70p@chr8:25530071..25530072, +
3.07e-86FFCP PHASE2:Mm9::chr12:86691530..86691535,-#_d8e39b4f3edc4301b0d316aab64dbb70p@chr12:86691530..86691535, -
3.07e-86FFCP PHASE1:Mm9::chr18:47491114..47491123,+#_d8e39b4f3edc4301b0d316aab64dbb70p@chr18:47491114..47491123, +
3.07e-86FFCP PHASE2:Mm9::chr11:48685851..48685860,-#_d8e39b4f3edc4301b0d316aab64dbb70p@chr11:48685851..48685860, -
3.07e-86FFCP PHASE1:Mm9::chr10:93499468..93499494,-#_d8e39b4f3edc4301b0d316aab64dbb70p@chr10:93499468..93499494, -
3.07e-86FFCP PHASE1:Mm9::chr2:129407463..129407468,-#_d8e39b4f3edc4301b0d316aab64dbb70p@chr2:129407463..129407468, -
3.07e-86FFCP PHASE2:Mm9::chr3:90270007..90270012,+#_d8e39b4f3edc4301b0d316aab64dbb70p@chr3:90270007..90270012, +
3.07e-86FFCP PHASE2:Mm9::chr6:51831254..51831256,-#_d8e39b4f3edc4301b0d316aab64dbb70p@chr6:51831254..51831256, -
3.07e-86FFCP PHASE2:Mm9::chr3:104857794..104857802,-#_d8e39b4f3edc4301b0d316aab64dbb70p@chr3:104857794..104857802, -
3.07e-86FFCP PHASE1:Mm9::chr11:48685851..48685860,-#_d8e39b4f3edc4301b0d316aab64dbb70p@chr11:48685851..48685860, -
3.07e-86FFCP PHASE2:Mm9::chr3:121593688..121593695,+#_d8e39b4f3edc4301b0d316aab64dbb70p@chr3:121593688..121593695, +
3.07e-86FFCP PHASE1:Mm9::chr12:88237840..88237851,-#_d8e39b4f3edc4301b0d316aab64dbb70p@chr12:88237840..88237851, -
3.07e-86FFCP PHASE1:Mm9::chr10:85585991..85586025,-#_d8e39b4f3edc4301b0d316aab64dbb70p@chr10:85585991..85586025, -
3.07e-86FFCP PHASE1:Mm9::chr17:34796428..34796430,-#_d8e39b4f3edc4301b0d316aab64dbb70p@chr17:34796428..34796430, -
3.07e-86FFCP PHASE1:Mm9::chr7:52781901..52781904,+#_d8e39b4f3edc4301b0d316aab64dbb70p@chr7:52781901..52781904, +
3.07e-86FFCP PHASE2:Mm9::chr1:186559285..186559288,+#_d8e39b4f3edc4301b0d316aab64dbb70p@chr1:186559285..186559288, +
3.07e-86FFCP PHASE2:Mm9::chr10:85585949..85585969,-#_d8e39b4f3edc4301b0d316aab64dbb70p@chr10:85585949..85585969, -
3.07e-86FFCP PHASE1:Mm9::chr8:114250006..114250039,-#_d8e39b4f3edc4301b0d316aab64dbb70p@chr8:114250006..114250039, -
3.07e-86FFCP PHASE1:Mm9::chr9:45920408..45920437,-#_d8e39b4f3edc4301b0d316aab64dbb70p@chr9:45920408..45920437, -
3.07e-86FFCP PHASE1:Mm9::chr6:51831254..51831256,-#_d8e39b4f3edc4301b0d316aab64dbb70p@chr6:51831254..51831256, -
3.07e-86FFCP PHASE1:Mm9::chr5:64344878..64344887,-#_d8e39b4f3edc4301b0d316aab64dbb70p@chr5:64344878..64344887, -
3.07e-86FFCP PHASE2:Mm9::chr18:44793802..44793835,+#_d8e39b4f3edc4301b0d316aab64dbb70p@chr18:44793802..44793835, +
3.07e-86FFCP PHASE1:Mm9::chr17:48822294..48822295,-#_d8e39b4f3edc4301b0d316aab64dbb70p@chr17:48822294..48822295, -
3.07e-86FFCP PHASE2:Mm9::chr16:85801525..85801529,-#_d8e39b4f3edc4301b0d316aab64dbb70p6@Adamts1
3.07e-86FFCP PHASE2:Mm9::chr18:38831400..38831402,-#_d8e39b4f3edc4301b0d316aab64dbb70p@chr18:38831400..38831402, -
3.07e-86FFCP PHASE2:Mm9::chr9:42915220..42915225,-#_d8e39b4f3edc4301b0d316aab64dbb70p@chr9:42915220..42915225, -
3.07e-86FFCP PHASE1:Mm9::chr4:62009160..62009164,-#_d8e39b4f3edc4301b0d316aab64dbb70p@chr4:62009160..62009164, -
3.07e-86FFCP PHASE2:Mm9::chr13:100000226..100000230,+#_d8e39b4f3edc4301b0d316aab64dbb70p@chr13:100000226..100000230, +
3.07e-86FFCP PHASE1:Mm9::chr17:28107053..28107062,-#_d8e39b4f3edc4301b0d316aab64dbb70p@chr17:28107053..28107062, -
3.07e-86FFCP PHASE1:Mm9::chr13:113053257..113053258,+#_d8e39b4f3edc4301b0d316aab64dbb70p@chr13:113053257..113053258, +
3.07e-86FFCP PHASE1:Mm9::chr10:94580525..94580530,+#_d8e39b4f3edc4301b0d316aab64dbb70p@chr10:94580525..94580530, +
3.07e-86FFCP PHASE1:Mm9::chr16:30944451..30944485,+#_d8e39b4f3edc4301b0d316aab64dbb70p@chr16:30944451..30944485, +
3.07e-86FFCP PHASE2:Mm9::chr18:35881716..35881727,-#_d8e39b4f3edc4301b0d316aab64dbb70p@chr18:35881716..35881727, -
3.07e-86FFCP PHASE2:Mm9::chr2:84756280..84756286,+#_d8e39b4f3edc4301b0d316aab64dbb70p@chr2:84756280..84756286, +
3.07e-86FFCP PHASE1:Mm9::chr11:115280630..115280662,+#_d8e39b4f3edc4301b0d316aab64dbb70p@chr11:115280630..115280662, +
3.07e-86FFCP PHASE1:Mm9::chr12:86691575..86691580,-#_d8e39b4f3edc4301b0d316aab64dbb70p@chr12:86691575..86691580, -
3.07e-86FFCP PHASE2:Mm9::chr17:12388232..12388237,+#_d8e39b4f3edc4301b0d316aab64dbb70p@chr17:12388232..12388237, +
3.07e-86FFCP PHASE1:Mm9::chr3:9705000..9705004,-#_d8e39b4f3edc4301b0d316aab64dbb70p4@Pag1
3.07e-86FFCP PHASE1:Mm9::chr18:4336287..4336296,-#_d8e39b4f3edc4301b0d316aab64dbb70p8@Map3k8
3.07e-86FFCP PHASE1:Mm9::chr13:100000226..100000230,+#_d8e39b4f3edc4301b0d316aab64dbb70p@chr13:100000226..100000230, +
3.07e-86FFCP PHASE1:Mm9::chr10:8586393..8586401,+#_d8e39b4f3edc4301b0d316aab64dbb70p@chr10:8586393..8586401, +
3.07e-86FFCP PHASE1:Mm9::chr17:35093764..35093773,-#_d8e39b4f3edc4301b0d316aab64dbb70p@chr17:35093764..35093773, -
3.07e-86FFCP PHASE2:Mm9::chr16:28911901..28911906,-#_d8e39b4f3edc4301b0d316aab64dbb70p@chr16:28911901..28911906, -
3.07e-86FFCP PHASE2:Mm9::chr15:59435855..59435878,-#_d8e39b4f3edc4301b0d316aab64dbb70p@chr15:59435855..59435878, -
3.07e-86FFCP PHASE2:Mm9::chr9:45920408..45920437,-#_d8e39b4f3edc4301b0d316aab64dbb70p@chr9:45920408..45920437, -
3.07e-86FFCP PHASE2:Mm9::chr16:30944451..30944485,+#_d8e39b4f3edc4301b0d316aab64dbb70p@chr16:30944451..30944485, +
3.07e-86FFCP PHASE2:Mm9::chr15:82209805..82209851,+#_d8e39b4f3edc4301b0d316aab64dbb70p@chr15:82209805..82209851, +
3.07e-86FFCP PHASE1:Mm9::chr12:8400090..8400093,+#_d8e39b4f3edc4301b0d316aab64dbb70p@chr12:8400090..8400093, +
3.07e-86FFCP PHASE1:Mm9::chr15:82209805..82209851,+#_d8e39b4f3edc4301b0d316aab64dbb70p@chr15:82209805..82209851, +
3.07e-86FFCP PHASE1:Mm9::chr11:88890706..88890745,+#_d8e39b4f3edc4301b0d316aab64dbb70p@chr11:88890706..88890745, +
3.07e-86FFCP PHASE1:Mm9::chr5:75375903..75375931,+#_d8e39b4f3edc4301b0d316aab64dbb70p@chr5:75375903..75375931, +
3.07e-86FFCP PHASE1:Mm9::chr16:11009028..11009039,+#_d8e39b4f3edc4301b0d316aab64dbb70p4@Gm4262
3.07e-86FFCP PHASE1:Mm9::chr8:89310639..89310641,-#_d8e39b4f3edc4301b0d316aab64dbb70p@chr8:89310639..89310641, -
3.07e-86FFCP PHASE1:Mm9::chr8:111108947..111108951,+#_d8e39b4f3edc4301b0d316aab64dbb70p@chr8:111108947..111108951, +
3.07e-86FFCP PHASE2:Mm9::chr16:11009028..11009039,+#_d8e39b4f3edc4301b0d316aab64dbb70p4@Gm4262
3.07e-86FFCP PHASE2:Mm9::chr11:109223779..109223789,-#_d8e39b4f3edc4301b0d316aab64dbb70p@chr11:109223779..109223789, -
3.07e-86FFCP PHASE2:Mm9::chr6:34549876..34549892,-#_d8e39b4f3edc4301b0d316aab64dbb70p@chr6:34549876..34549892, -
3.07e-86FFCP PHASE1:Mm9::chr18:35900327..35900366,+#_d8e39b4f3edc4301b0d316aab64dbb70p@chr18:35900327..35900366, +
3.07e-86FFCP PHASE1:Mm9::chr9:42915220..42915225,-#_d8e39b4f3edc4301b0d316aab64dbb70p@chr9:42915220..42915225, -
3.07e-86FFCP PHASE2:Mm9::chr15:32178407..32178408,-#_d8e39b4f3edc4301b0d316aab64dbb70p@chr15:32178407..32178408, -
3.07e-86FFCP PHASE1:Mm9::chr9:62199266..62199267,+#_d8e39b4f3edc4301b0d316aab64dbb70p@chr9:62199266..62199267, +
3.07e-86FFCP PHASE2:Mm9::chr17:48822294..48822295,-#_d8e39b4f3edc4301b0d316aab64dbb70p@chr17:48822294..48822295, -
3.07e-86FFCP PHASE2:Mm9::chr17:28107053..28107062,-#_d8e39b4f3edc4301b0d316aab64dbb70p@chr17:28107053..28107062, -
3.07e-86FFCP PHASE1:Mm9::chr6:129180613..129180616,+#_d8e39b4f3edc4301b0d316aab64dbb70p@chr6:129180613..129180616, +
3.07e-86FFCP PHASE2:Mm9::chr18:5125608..5125613,+#_d8e39b4f3edc4301b0d316aab64dbb70p@chr18:5125608..5125613, +
3.07e-86FFCP PHASE2:Mm9::chr2:133323630..133323631,+#_d8e39b4f3edc4301b0d316aab64dbb70p@chr2:133323630..133323631, +
3.07e-86FFCP PHASE1:Mm9::chr16:85801525..85801529,-#_d8e39b4f3edc4301b0d316aab64dbb70p6@Adamts1
3.07e-86FFCP PHASE2:Mm9::chr8:114123814..114123821,-#_d8e39b4f3edc4301b0d316aab64dbb70p@chr8:114123814..114123821, -
3.07e-86FFCP PHASE2:Mm9::chr12:86691575..86691580,-#_d8e39b4f3edc4301b0d316aab64dbb70p@chr12:86691575..86691580, -
3.07e-86FFCP PHASE2:Mm9::chr11:88890706..88890745,+#_d8e39b4f3edc4301b0d316aab64dbb70p@chr11:88890706..88890745, +
3.07e-86FFCP PHASE1:Mm9::chr1:137570295..137570315,+#_d8e39b4f3edc4301b0d316aab64dbb70p@chr1:137570295..137570315, +
3.07e-86FFCP PHASE2:Mm9::chr11:54785454..54785456,-#_d8e39b4f3edc4301b0d316aab64dbb70p@chr11:54785454..54785456, -
3.07e-86FFCP PHASE1:Mm9::chr18:5125608..5125613,+#_d8e39b4f3edc4301b0d316aab64dbb70p@chr18:5125608..5125613, +
3.07e-86FFCP PHASE1:Mm9::chr10:93819538..93819549,+#_d8e39b4f3edc4301b0d316aab64dbb70p@chr10:93819538..93819549, +
3.07e-86FFCP PHASE1:Mm9::chr17:35106363..35106372,-#_d8e39b4f3edc4301b0d316aab64dbb70p@chr17:35106363..35106372, -
3.07e-86FFCP PHASE1:Mm9::chr11:109223756..109223764,-#_d8e39b4f3edc4301b0d316aab64dbb70p@chr11:109223756..109223764, -
3.07e-86FFCP PHASE2:Mm9::chr15:97402708..97402712,+#_d8e39b4f3edc4301b0d316aab64dbb70p@chr15:97402708..97402712, +
3.07e-86FFCP PHASE2:Mm9::chr4:43407825..43407830,+#_d8e39b4f3edc4301b0d316aab64dbb70p@chr4:43407825..43407830, +
3.07e-86FFCP PHASE1:Mm9::chr6:48398664..48398684,-#_d8e39b4f3edc4301b0d316aab64dbb70p@chr6:48398664..48398684, -
3.07e-86FFCP PHASE1:Mm9::chr15:88669906..88669914,+#_d8e39b4f3edc4301b0d316aab64dbb70p@chr15:88669906..88669914, +
3.07e-86FFCP PHASE1:Mm9::chr10:85586219..85586227,+#_d8e39b4f3edc4301b0d316aab64dbb70p@chr10:85586219..85586227, +
3.07e-86FFCP PHASE1:Mm9::chr17:34798555..34798562,+#_d8e39b4f3edc4301b0d316aab64dbb70p@chr17:34798555..34798562, +
3.07e-86FFCP PHASE1:Mm9::chr17:67870501..67870507,+#_d8e39b4f3edc4301b0d316aab64dbb70p@chr17:67870501..67870507, +
3.07e-86FFCP PHASE1:Mm9::chr12:81955014..81955018,+#_d8e39b4f3edc4301b0d316aab64dbb70p@chr12:81955014..81955018, +
3.07e-86FFCP PHASE2:Mm9::chr4:86335502..86335509,+#_d8e39b4f3edc4301b0d316aab64dbb70p@chr4:86335502..86335509, +
3.07e-86FFCP PHASE1:Mm9::chr11:119254092..119254100,-#_d8e39b4f3edc4301b0d316aab64dbb70p@chr11:119254092..119254100, -
3.07e-86FFCP PHASE2:Mm9::chr17:35096519..35096524,+#_d8e39b4f3edc4301b0d316aab64dbb70p@chr17:35096519..35096524, +
3.07e-86FFCP PHASE2:Mm9::chr8:86713876..86713879,+#_d8e39b4f3edc4301b0d316aab64dbb70p@chr8:86713876..86713879, +
3.07e-86FFCP PHASE1:Mm9::chr7:118133901..118133904,-#_d8e39b4f3edc4301b0d316aab64dbb70p@chr7:118133901..118133904, -
3.07e-86FFCP PHASE1:Mm9::chr6:15678147..15678149,-#_d8e39b4f3edc4301b0d316aab64dbb70p@chr6:15678147..15678149, -

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