UBERON:0004016: Difference between revisions
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{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment=Not to be confused with 'dermatome segment of skin'. | |comment=Not to be confused with 'dermatome segment of skin'. | ||
|created_by= | |created_by= | ||
| | |def="the mesoderm that is derived from the somite that is fated to become the dermis[MP]" [MP:0003940, Wikipedia:Dermatomal_mesenchyme] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from=UBERON:0002329;;UBERON:0004290 | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0004016 | |||
|is_a=UBERON:0017650 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|part_of= | |name=dermatome | ||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of=UBERON:0000926 | |||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset= | ||
| | |synonym="cutis plate" EXACT [Wikipedia:Cutis_plate];;"dermatomal mesenchyme" EXACT [Wikipedia:Cutis_plate];;"mesenchyma dermatomiale" RELATED LATIN [Wikipedia:Dermatomal_mesenchyme] | ||
|union_of= | |||
|xref=AAO:0011028;;EHDAA2:0003428;;EHDAA:1719;;EHDAA:1725;;EHDAA:1731;;EHDAA:1737;;http://upload.wikimedia.org/wikipedia/commons/f/f3/Gray64.png;;ncithesaurus:Dermatome;;XAO:0000220 | |||
}} | }} | ||
Latest revision as of 17:42, 12 September 2014
| Name: | dermatome | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "the mesoderm that is derived from the somite that is fated to become the dermis[MP]" [MP:0003940, Wikipedia:Dermatomal_mesenchyme] | ||
| Xrefs: |
| ||
| Synonyms: |
"cutis plate" EXACT [Wikipedia:Cutis_plate] "dermatomal mesenchyme" EXACT [Wikipedia:Cutis_plate] "mesenchyma dermatomiale" RELATED LATIN [Wikipedia:Dermatomal_mesenchyme] | ||
| Comments: | Not to be confused with 'dermatome segment of skin'. |
Gray64.png]
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0017650(developing mesenchymal structure) |
|---|---|
| develops_from: | UBERON:0002329(somite),UBERON:0004290(dermomyotome) |
| part_of: | UBERON:0000926(mesoderm) |
Children
| develops from: | UBERON:0002067 (dermis),UBERON:0010083 (future dermis) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004016 (dermatome), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.31e-68 | FFCP PHASE1:Hg19::chr1:45087872..45087892,+#_65def47672cd28d99148fd44c6f9e8b3 | p@chr1:45087872..45087892, + |
| 1.31e-68 | FFCP PHASE2:Hg19::chr1:45087872..45087892,+#_65def47672cd28d99148fd44c6f9e8b3 | p@chr1:45087872..45087892, + |
| 9.25e-50 | FFCP PHASE1:Hg19::chr7:107707064..107707079,-#_af943cc49add8eab4b1f7813e6a5b42d | p@chr7:107707064..107707079, - |
| 9.25e-50 | FFCP PHASE2:Hg19::chr7:107707064..107707079,-#_af943cc49add8eab4b1f7813e6a5b42d | p@chr7:107707064..107707079, - |
| 9.25e-50 | FFCP PHASE1:Hg19::chr7:107707083..107707099,-#_af943cc49add8eab4b1f7813e6a5b42d | p@chr7:107707083..107707099, - |
| 9.25e-50 | FFCP PHASE2:Hg19::chr7:107707083..107707099,-#_af943cc49add8eab4b1f7813e6a5b42d | p@chr7:107707083..107707099, - |
| 9.89e-40 | FFCP PHASE1:Hg19::chr10:124254447..124254458,-#_07c94164aa750d1865adf3cee7ed0d31 | p@chr10:124254447..124254458, - |
| 9.89e-40 | FFCP PHASE2:Hg19::chr10:124254447..124254458,-#_07c94164aa750d1865adf3cee7ed0d31 | p@chr10:124254447..124254458, - |
| 1.21e-39 | FFCP PHASE1:Hg19::chr1:10228206..10228218,+#_beb3c83077492f1e29415f05d303b105 | p@chr1:10228206..10228218, + |
| 1.21e-39 | FFCP PHASE2:Hg19::chr1:10228206..10228218,+#_beb3c83077492f1e29415f05d303b105 | p@chr1:10228206..10228218, + |
| 5.08e-38 | FFCP PHASE1:Hg19::chr6:5498703..5498727,+#_eb97cff328890e99ff220925da4451b1 | p@chr6:5498703..5498727, + |
| 5.08e-38 | FFCP PHASE2:Hg19::chr6:5498703..5498727,+#_eb97cff328890e99ff220925da4451b1 | p@chr6:5498703..5498727, + |
| 2.83e-35 | FFCP PHASE2:Hg19::chr8:128387795..128387801,+#_8e7a88f4ca29ce2f40d5bf4cdf612c47 | p@chr8:128387795..128387801, + |
| 2.83e-35 | FFCP PHASE1:Hg19::chr8:128387795..128387801,+#_8e7a88f4ca29ce2f40d5bf4cdf612c47 | p@chr8:128387795..128387801, + |
| 1.55e-33 | FFCP PHASE2:Hg19::chr1:45088343..45088354,+#_1bdf1715d64d02be0083ff51dca5d3ba | p@chr1:45088343..45088354, + |
| 1.55e-33 | FFCP PHASE1:Hg19::chr1:45088343..45088354,+#_1bdf1715d64d02be0083ff51dca5d3ba | p@chr1:45088343..45088354, + |
| 5.64e-29 | FFCP PHASE2:Hg19::chr7:98258032..98258045,+#_ce24cb6e20d2b149dd3e93a24f4ee1eb | p@chr7:98258032..98258045, + |
| 5.64e-29 | FFCP PHASE1:Hg19::chr7:98258032..98258045,+#_ce24cb6e20d2b149dd3e93a24f4ee1eb | p@chr7:98258032..98258045, + |
| 7.57e-28 | FFCP PHASE1:Hg19::chr10:31071229..31071236,+#_6497ab03705d358114330d3303c6eed3 | p@chr10:31071229..31071236, + |
| 7.57e-28 | FFCP PHASE2:Hg19::chr10:31071229..31071236,+#_6497ab03705d358114330d3303c6eed3 | p@chr10:31071229..31071236, + |
| 1.12e-26 | FFCP PHASE1:Hg19::chr5:33794920..33794939,-#_8256aae2a1f4b7697787da67cecb034e | p@chr5:33794920..33794939, - |
| 1.12e-26 | FFCP PHASE2:Hg19::chr5:33794920..33794939,-#_8256aae2a1f4b7697787da67cecb034e | p@chr5:33794920..33794939, - |
| 1.47e-26 | FFCP PHASE1:Hg19::chr21:47405899..47405911,+#_77daa310ed461e74d77b5ed28954a023 | p@chr21:47405899..47405911, + |
| 1.47e-26 | FFCP PHASE2:Hg19::chr21:47405899..47405911,+#_77daa310ed461e74d77b5ed28954a023 | p@chr21:47405899..47405911, + |
| 1.5e-25 | FFCP PHASE2:Hg19::chr4:89454373..89454379,-#_1bf9dcf67e96191ce404e48f287685a8 | p@chr4:89454373..89454379, - |
| 1.5e-25 | FFCP PHASE2:Hg19::chr17:38174999..38175001,+#_1bf9dcf67e96191ce404e48f287685a8 | p8@CASC3 |
| 1.5e-25 | FFCP PHASE1:Hg19::chr4:89454373..89454379,-#_1bf9dcf67e96191ce404e48f287685a8 | p@chr4:89454373..89454379, - |
| 1.5e-25 | FFCP PHASE1:Hg19::chr17:38174999..38175001,+#_1bf9dcf67e96191ce404e48f287685a8 | p8@CASC3 |
| 2.99e-25 | FFCP PHASE2:Hg19::chr8:141656896..141656918,-#_1ce98ad2c4c9d0aaec329c78dd49d15c | p@chr8:141656896..141656918, - |
| 2.99e-25 | FFCP PHASE1:Hg19::chr8:141656896..141656918,-#_1ce98ad2c4c9d0aaec329c78dd49d15c | p@chr8:141656896..141656918, - |
| 3.17e-25 | FFCP PHASE1:Hg19::chr2:95983133..95983144,+#_eb7a43544a7a4af8915cb78d2b9421de | p@chr2:95983133..95983144, + |
| 3.17e-25 | FFCP PHASE2:Hg19::chr2:95983133..95983144,+#_eb7a43544a7a4af8915cb78d2b9421de | p@chr2:95983133..95983144, + |
| 2.03e-24 | FFCP PHASE1:Hg19::chr5:33794876..33794902,-#_86434b0ef03c3e8e4e9db5997f43cb47 | p@chr5:33794876..33794902, - |
| 2.03e-24 | FFCP PHASE2:Hg19::chr5:33794876..33794902,-#_86434b0ef03c3e8e4e9db5997f43cb47 | p@chr5:33794876..33794902, - |
| 2.4e-24 | FFCP PHASE2:Hg19::chr5:174252830..174252847,+#_8312b5e9d6dffccf25e10704911b234a | p@chr5:174252830..174252847, + |
| 2.4e-24 | FFCP PHASE1:Hg19::chr5:174252830..174252847,+#_8312b5e9d6dffccf25e10704911b234a | p@chr5:174252830..174252847, + |
| 2.92e-24 | FFCP PHASE2:Hg19::chr4:127699583..127699608,-#_ac64c8dbedffe843f058c307eaef2718 | p@chr4:127699583..127699608, - |
| 2.92e-24 | FFCP PHASE1:Hg19::chr4:127699583..127699608,-#_ac64c8dbedffe843f058c307eaef2718 | p@chr4:127699583..127699608, - |
| 1.68e-23 | FFCP PHASE2:Hg19::chr4:127876558..127876592,-#_3dd5252d77d380f92c8fc1af2af0d91a | p1@ENST00000515428 |
| 1.68e-23 | FFCP PHASE1:Hg19::chr4:127876558..127876592,-#_3dd5252d77d380f92c8fc1af2af0d91a | p1@ENST00000515428 |
| 2.62e-23 | FFCP PHASE1:Hg19::chr7:127963997..127964004,-#_78d9fb187ca90a528018dacca7a8e16d | p@chr7:127963997..127964004, - |
| 2.62e-23 | FFCP PHASE2:Hg19::chr7:127963997..127964004,-#_78d9fb187ca90a528018dacca7a8e16d | p@chr7:127963997..127964004, - |
| 3.32e-23 | FFCP PHASE2:Hg19::chr17:813116..813132,+#_cdaf634fa98f12b2e9a6590f63ec0711 | p@chr17:813116..813132, + |
| 3.32e-23 | FFCP PHASE1:Hg19::chr17:813116..813132,+#_cdaf634fa98f12b2e9a6590f63ec0711 | p@chr17:813116..813132, + |
| 6.41e-23 | FFCP PHASE2:Hg19::chr16:85617034..85617043,-#_035a4f1a8ac785f9fb547dc7c1409711 | p@chr16:85617034..85617043, - |
| 6.41e-23 | FFCP PHASE1:Hg19::chr16:85617034..85617043,-#_035a4f1a8ac785f9fb547dc7c1409711 | p@chr16:85617034..85617043, - |
| 7.17e-23 | FFCP PHASE2:Hg19::chr5:174252850..174252859,+#_d5339dddaf3e74fb4f5ee02153581a17 | p@chr5:174252850..174252859, + |
| 7.17e-23 | FFCP PHASE1:Hg19::chr5:174252850..174252859,+#_d5339dddaf3e74fb4f5ee02153581a17 | p@chr5:174252850..174252859, + |
| 7.17e-23 | FFCP PHASE1:Hg19::chr5:177652352..177652356,-#_d5339dddaf3e74fb4f5ee02153581a17 | p6@AGXT2L2 |
| 7.17e-23 | FFCP PHASE2:Hg19::chr5:177652352..177652356,-#_d5339dddaf3e74fb4f5ee02153581a17 | p6@AGXT2L2 |
| 4.19e-22 | FFCP PHASE1:Hg19::chr5:33794904..33794916,-#_8107af44733be9b1651a986a70e95582 | p@chr5:33794904..33794916, - |
| 4.19e-22 | FFCP PHASE2:Hg19::chr5:33794904..33794916,-#_8107af44733be9b1651a986a70e95582 | p@chr5:33794904..33794916, - |
| 3.14e-21 | FFCP PHASE1:Hg19::chr11:122051600..122051617,+#_fb78a6dea3e93d5ef7236bbf77d5f34f | p@chr11:122051600..122051617, + |
| 3.14e-21 | FFCP PHASE2:Hg19::chr11:122051600..122051617,+#_fb78a6dea3e93d5ef7236bbf77d5f34f | p@chr11:122051600..122051617, + |
| 7.71e-21 | FFCP PHASE2:Hg19::chr21:36208749..36208768,+#_bfcb0ab832c3eeae84575aa21549994b | p@chr21:36208749..36208768, + |
| 7.71e-21 | FFCP PHASE1:Hg19::chr21:36208749..36208768,+#_bfcb0ab832c3eeae84575aa21549994b | p@chr21:36208749..36208768, + |
| 8.88e-21 | FFCP PHASE2:Hg19::chr20:940152..940156,-#_c56f4fa57d8cf94bb6463d69964daa7b | p@chr20:940152..940156, - |
| 8.88e-21 | FFCP PHASE1:Hg19::chr20:940152..940156,-#_c56f4fa57d8cf94bb6463d69964daa7b | p@chr20:940152..940156, - |
| 9.8e-21 | FFCP PHASE2:Hg19::chr18:52969844..52969895,-#_9ef1aae16c14c926a07177eae73851d3 | p27@TCF4 |
| 9.8e-21 | FFCP PHASE1:Hg19::chr18:52969844..52969895,-#_9ef1aae16c14c926a07177eae73851d3 | p27@TCF4 |
| 1.24e-20 | FFCP PHASE2:Hg19::chr1:45087902..45087912,+#_7f57d65895ba372d6910265eb067dffe | p@chr1:45087902..45087912, + |
| 1.24e-20 | FFCP PHASE1:Hg19::chr1:45087902..45087912,+#_7f57d65895ba372d6910265eb067dffe | p@chr1:45087902..45087912, + |
| 1.29e-20 | FFCP PHASE2:Hg19::chr12:66036219..66036262,-#_682b16c832959a79f067ba8dd86446bf | p1@ENST00000544557 |
| 1.29e-20 | FFCP PHASE1:Hg19::chr12:66036219..66036262,-#_682b16c832959a79f067ba8dd86446bf | p1@ENST00000544557 |
| 1.32e-20 | FFCP PHASE2:Hg19::chr7:152549181..152549213,+#_0dec7c32bbbae25c3d6c48fe561b0cad | p@chr7:152549181..152549213, + |
| 1.32e-20 | FFCP PHASE1:Hg19::chr7:152549181..152549213,+#_0dec7c32bbbae25c3d6c48fe561b0cad | p@chr7:152549181..152549213, + |
| 1.73e-20 | FFCP PHASE1:Hg19::chr1:119530682..119530692,-#_db2e4eeead2ba6dcf036ebfd3cdb169e | p10@TBX15 |
| 1.73e-20 | FFCP PHASE2:Hg19::chr1:119530682..119530692,-#_db2e4eeead2ba6dcf036ebfd3cdb169e | p10@TBX15 |
| 2.11e-20 | FFCP PHASE2:Hg19::chr17:73682761..73682766,+#_d2223ebe637de9e7675f53629fa3e2ac | p@chr17:73682761..73682766, + |
| 2.11e-20 | FFCP PHASE1:Hg19::chr17:73682761..73682766,+#_d2223ebe637de9e7675f53629fa3e2ac | p@chr17:73682761..73682766, + |
| 4.35e-19 | FFCP PHASE2:Hg19::chr14:38371323..38371347,-#_26ba323af7ea390d7f6366dba453a957 | p1@ENST00000554257, p1@uc001wuk.1 |
| 4.35e-19 | FFCP PHASE1:Hg19::chr14:38371323..38371347,-#_26ba323af7ea390d7f6366dba453a957 | p1@ENST00000554257, p1@uc001wuk.1 |
| 4.67e-19 | FFCP PHASE2:Hg19::chr21:47404148..47404163,+#_c5d088cea623d692d140327549b52dac | p@chr21:47404148..47404163, + |
| 4.67e-19 | FFCP PHASE1:Hg19::chr21:47404148..47404163,+#_c5d088cea623d692d140327549b52dac | p@chr21:47404148..47404163, + |
| 5.29e-19 | FFCP PHASE2:Hg19::chr4:5754385..5754405,+#_89339b75ea1152f3ce1853933b5f6c5a | p3@EVC |
| 5.29e-19 | FFCP PHASE1:Hg19::chr4:5754385..5754405,+#_89339b75ea1152f3ce1853933b5f6c5a | p3@EVC |
| 1.22e-18 | FFCP PHASE1:Hg19::chr2:177022022..177022060,+#_aa43914d147c873962edd32bb1ef5140 | p@chr2:177022022..177022060, + |
| 1.22e-18 | FFCP PHASE2:Hg19::chr2:177022022..177022060,+#_aa43914d147c873962edd32bb1ef5140 | p@chr2:177022022..177022060, + |
| 1.35e-18 | FFCP PHASE2:Hg19::chr12:2163623..2163634,+#_5543c0c356307b6362193b0c892c219d | p@chr12:2163623..2163634, + |
| 1.35e-18 | FFCP PHASE2:Hg19::chr12:5198401..5198415,+#_5543c0c356307b6362193b0c892c219d | p@chr12:5198401..5198415, + |
| 1.35e-18 | FFCP PHASE1:Hg19::chr12:5198401..5198415,+#_5543c0c356307b6362193b0c892c219d | p@chr12:5198401..5198415, + |
| 1.35e-18 | FFCP PHASE1:Hg19::chr12:2163623..2163634,+#_5543c0c356307b6362193b0c892c219d | p@chr12:2163623..2163634, + |
| 1.51e-17 | FFCP PHASE1:Hg19::chr2:201474023..201474035,+#_a93de24af7a6e796f13267359b4c6ae3 | p5@AOX1 |
| 1.51e-17 | FFCP PHASE2:Hg19::chr2:201474023..201474035,+#_a93de24af7a6e796f13267359b4c6ae3 | p5@AOX1 |
| 3.53e-17 | FFCP PHASE2:Hg19::chr12:66036083..66036098,-#_8222474cff907f07de1502edf662c6b0 | p3@ENST00000539653 |
| 3.53e-17 | FFCP PHASE1:Hg19::chr12:66036083..66036098,-#_8222474cff907f07de1502edf662c6b0 | p3@ENST00000539653 |
| 4.17e-17 | FFCP PHASE2:Hg19::chrX:118362928..118362933,+#_f99fcb81103cb0629c4d32d99e68e339 | p@chrX:118362928..118362933, + |
| 4.17e-17 | FFCP PHASE1:Hg19::chrX:118362928..118362933,+#_f99fcb81103cb0629c4d32d99e68e339 | p@chrX:118362928..118362933, + |
| 4.92e-17 | FFCP PHASE2:Hg19::chr4:81159520..81159523,+#_dfdc7a39aa9427186f23d8b90fc7f743 | p@chr4:81159520..81159523, + |
| 4.92e-17 | FFCP PHASE1:Hg19::chr4:81159520..81159523,+#_dfdc7a39aa9427186f23d8b90fc7f743 | p@chr4:81159520..81159523, + |
| 7.89e-17 | FFCP PHASE1:Hg19::chr2:177502906..177502920,-#_ab9637225282a17199ab401aa82ff486 | p2@ENST00000295549, p2@uc002ukz.1 |
| 7.89e-17 | FFCP PHASE2:Hg19::chr2:177502906..177502920,-#_ab9637225282a17199ab401aa82ff486 | p2@ENST00000295549, p2@uc002ukz.1 |
| 8.61e-17 | FFCP PHASE2:Hg19::chr1:85987126..85987173,-#_a1410e9c51acec6f5eed7bede64cece0 | p@chr1:85987126..85987173, - |
| 8.61e-17 | FFCP PHASE1:Hg19::chr1:85987126..85987173,-#_a1410e9c51acec6f5eed7bede64cece0 | p@chr1:85987126..85987173, - |
| 8.66e-17 | FFCP PHASE1:Hg19::chr3:139000423..139000454,+#_79430d819aca7758f1163da941bcb867 | p3@MRPS22 |
| 8.66e-17 | FFCP PHASE2:Hg19::chr3:139000423..139000454,+#_79430d819aca7758f1163da941bcb867 | p3@MRPS22 |
| 9.03e-17 | FFCP PHASE2:Hg19::chr17:46627545..46627560,+#_29f968f4b6be8cfff31b14cfa12e6d51 | p@chr17:46627545..46627560, + |
| 9.03e-17 | FFCP PHASE1:Hg19::chr17:46627545..46627560,+#_29f968f4b6be8cfff31b14cfa12e6d51 | p@chr17:46627545..46627560, + |
| 1.05e-16 | FFCP PHASE2:Hg19::chr20:4451008..4451026,-#_c468bfdb83d946379d28f6f8ffc91a20 | p@chr20:4451008..4451026, - |
| 1.05e-16 | FFCP PHASE1:Hg19::chr20:4451008..4451026,-#_c468bfdb83d946379d28f6f8ffc91a20 | p@chr20:4451008..4451026, - |
