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{{CL
{{CL
|id=CL:0000062
|alt_id=
|name=osteoblast
|namespace=cell;;efo
|def="A bone-forming cell which secretes an extracellular matrix. Hydroxyapatite crystals are then deposited into the matrix to form bone." [MESH:A.11.329.629]
|xref=BTO:0001593;;FMA:66780
|is_a=CL:0000055;;CL:0002320
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="A bone-forming cell which secretes an extracellular matrix. Hydroxyapatite crystals are then deposited into the matrix to form bone." [MESH:A.11.329.629]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=CL:0007010
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0000062
|is_a=CL:0000055 ;;CL:0002320
|is_obsolete=
|located_in=
|located_in=
|name=osteoblast
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=BTO:0001593;;FMA:66780
}}
}}

Latest revision as of 16:28, 12 September 2014

Name:osteoblast
Namespace:FANTOM
Definition:"A bone-forming cell which secretes an extracellular matrix. Hydroxyapatite crystals are then deposited into the matrix to form bone." [MESH:A.11.329.629]
Xrefs:
links:

BTO:0001593

FMA:66780


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:CL:0000055(non-terminally differentiated cell),CL:0002320(connective tissue cell)
develops_from:CL:0007010(preosteoblast)



Children


derives from:FF:0000127 (human osteoblast-Sciencell sample),FF:0000128 (human osteoblast-Cell applications sample)
develops from:CL:0000137 (osteocyte)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000062 (osteoblast), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data