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{{CL
{{CL
|id=CL:0000164
|alt_id=
|name=enteroendocrine cell
|namespace=cell
|def="An endocrine cell that is located in the epithelium of the gastrointestinal tract or in the pancreas." [GOC:tfm, SANBI:mhl]
|xref=BTO:0003865;;FMA:62930
|is_a=CL:0000150;;CL:0000163
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="An endocrine cell that is located in the epithelium of the gastrointestinal tract or in the pancreas." [GOC:tfm, SANBI:mhl]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0000164
|is_a=CL:0000150 ;;CL:0000163
|is_obsolete=
|located_in=
|located_in=
|name=enteroendocrine cell
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=BTO:0003865;;FMA:62930
}}
}}

Latest revision as of 16:30, 12 September 2014

Name:enteroendocrine cell
Namespace:FANTOM
Definition:"An endocrine cell that is located in the epithelium of the gastrointestinal tract or in the pancreas." [GOC:tfm, SANBI:mhl]
Xrefs:
links:

BTO:0003865

FMA:62930


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000150(glandular epithelial cell),CL:0000163(endocrine cell)



Children


is a:CL:0000169 (type B pancreatic cell),CL:0000502 (type D enteroendocrine cell),CL:0002280 (type N enteroendocrine cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000164 (enteroendocrine cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
5.42e-195FFCP PHASE2:Hg19::chr9:77257468..77257474,-#_52dff02d47d8f4be02f564bb4a8ae3a8p@chr9:77257468..77257474, -
5.42e-195FFCP PHASE1:Hg19::chr6:50692244..50692251,+#_52dff02d47d8f4be02f564bb4a8ae3a8p@chr6:50692244..50692251, +
5.42e-195FFCP PHASE1:Hg19::chr1:193232144..193232147,+#_52dff02d47d8f4be02f564bb4a8ae3a8p@chr1:193232144..193232147, +
5.42e-195FFCP PHASE1:Hg19::chr20:20173664..20173680,+#_52dff02d47d8f4be02f564bb4a8ae3a8p@chr20:20173664..20173680, +
5.42e-195FFCP PHASE1:Hg19::chr9:96678236..96678246,-#_52dff02d47d8f4be02f564bb4a8ae3a8p@chr9:96678236..96678246, -
5.42e-195FFCP PHASE1:Hg19::chr1:193186161..193186169,-#_52dff02d47d8f4be02f564bb4a8ae3a8p@chr1:193186161..193186169, -
5.42e-195FFCP PHASE2:Hg19::chr1:193232079..193232084,+#_52dff02d47d8f4be02f564bb4a8ae3a8p@chr1:193232079..193232084, +
5.42e-195FFCP PHASE1:Hg19::chr9:77257468..77257474,-#_52dff02d47d8f4be02f564bb4a8ae3a8p@chr9:77257468..77257474, -
5.42e-195FFCP PHASE1:Hg19::chr12:70464665..70464668,+#_52dff02d47d8f4be02f564bb4a8ae3a8p@chr12:70464665..70464668, +
5.42e-195FFCP PHASE2:Hg19::chr12:70464665..70464668,+#_52dff02d47d8f4be02f564bb4a8ae3a8p@chr12:70464665..70464668, +
5.42e-195FFCP PHASE1:Hg19::chr18:56815879..56815901,+#_52dff02d47d8f4be02f564bb4a8ae3a8p@chr18:56815879..56815901, +
5.42e-195FFCP PHASE2:Hg19::chr18:56815879..56815901,+#_52dff02d47d8f4be02f564bb4a8ae3a8p@chr18:56815879..56815901, +
5.42e-195FFCP PHASE1:Hg19::chr1:193232079..193232084,+#_52dff02d47d8f4be02f564bb4a8ae3a8p@chr1:193232079..193232084, +
5.42e-195FFCP PHASE2:Hg19::chr6:50692244..50692251,+#_52dff02d47d8f4be02f564bb4a8ae3a8p@chr6:50692244..50692251, +
5.42e-195FFCP PHASE2:Hg19::chr1:193232144..193232147,+#_52dff02d47d8f4be02f564bb4a8ae3a8p@chr1:193232144..193232147, +
5.42e-195FFCP PHASE2:Hg19::chr10:120200137..120200154,+#_52dff02d47d8f4be02f564bb4a8ae3a8p@chr10:120200137..120200154, +
5.42e-195FFCP PHASE2:Hg19::chr1:193186161..193186169,-#_52dff02d47d8f4be02f564bb4a8ae3a8p@chr1:193186161..193186169, -
5.42e-195FFCP PHASE1:Hg19::chr10:120200137..120200154,+#_52dff02d47d8f4be02f564bb4a8ae3a8p@chr10:120200137..120200154, +
5.42e-195FFCP PHASE2:Hg19::chr9:96678236..96678246,-#_52dff02d47d8f4be02f564bb4a8ae3a8p@chr9:96678236..96678246, -
5.42e-195FFCP PHASE2:Hg19::chr20:20173664..20173680,+#_52dff02d47d8f4be02f564bb4a8ae3a8p@chr20:20173664..20173680, +
9.37e-99FFCP PHASE2:Hg19::chr1:193186195..193186210,-#_51365aaaa4fb8be05de624c4b74063fap@chr1:193186195..193186210, -
9.37e-99FFCP PHASE1:Hg19::chr9:77257424..77257435,-#_51365aaaa4fb8be05de624c4b74063fap@chr9:77257424..77257435, -
9.37e-99FFCP PHASE1:Hg19::chr6:161970049..161970057,-#_51365aaaa4fb8be05de624c4b74063fap3@GU361471
9.37e-99FFCP PHASE2:Hg19::chr4:59982412..59982425,+#_51365aaaa4fb8be05de624c4b74063fap@chr4:59982412..59982425, +
9.37e-99FFCP PHASE1:Hg19::chr6:154858237..154858245,-#_51365aaaa4fb8be05de624c4b74063fap@chr6:154858237..154858245, -
9.37e-99FFCP PHASE1:Hg19::chr4:59982412..59982425,+#_51365aaaa4fb8be05de624c4b74063fap@chr4:59982412..59982425, +
9.37e-99FFCP PHASE2:Hg19::chr18:56813724..56813731,+#_51365aaaa4fb8be05de624c4b74063fap@chr18:56813724..56813731, +
9.37e-99FFCP PHASE1:Hg19::chr1:193186195..193186210,-#_51365aaaa4fb8be05de624c4b74063fap@chr1:193186195..193186210, -
9.37e-99FFCP PHASE1:Hg19::chr18:56813724..56813731,+#_51365aaaa4fb8be05de624c4b74063fap@chr18:56813724..56813731, +
9.37e-99FFCP PHASE2:Hg19::chr4:139208173..139208199,-#_51365aaaa4fb8be05de624c4b74063fap@chr4:139208173..139208199, -
9.37e-99FFCP PHASE2:Hg19::chr1:193232096..193232117,+#_51365aaaa4fb8be05de624c4b74063fap@chr1:193232096..193232117, +
9.37e-99FFCP PHASE1:Hg19::chr12:70464675..70464680,+#_51365aaaa4fb8be05de624c4b74063fap@chr12:70464675..70464680, +
9.37e-99FFCP PHASE2:Hg19::chr12:70464675..70464680,+#_51365aaaa4fb8be05de624c4b74063fap@chr12:70464675..70464680, +
9.37e-99FFCP PHASE1:Hg19::chr4:139208173..139208199,-#_51365aaaa4fb8be05de624c4b74063fap@chr4:139208173..139208199, -
9.37e-99FFCP PHASE1:Hg19::chr18:7955271..7955280,+#_51365aaaa4fb8be05de624c4b74063fap@chr18:7955271..7955280, +
9.37e-99FFCP PHASE2:Hg19::chr18:7955271..7955280,+#_51365aaaa4fb8be05de624c4b74063fap@chr18:7955271..7955280, +
9.37e-99FFCP PHASE2:Hg19::chr6:154858221..154858224,-#_51365aaaa4fb8be05de624c4b74063fap@chr6:154858221..154858224, -
9.37e-99FFCP PHASE2:Hg19::chr4:173014804..173014812,+#_51365aaaa4fb8be05de624c4b74063fap@chr4:173014804..173014812, +
9.37e-99FFCP PHASE2:Hg19::chr9:77257424..77257435,-#_51365aaaa4fb8be05de624c4b74063fap@chr9:77257424..77257435, -
9.37e-99FFCP PHASE2:Hg19::chr6:161970049..161970057,-#_51365aaaa4fb8be05de624c4b74063fap3@GU361471
9.37e-99FFCP PHASE1:Hg19::chr1:193232096..193232117,+#_51365aaaa4fb8be05de624c4b74063fap@chr1:193232096..193232117, +
9.37e-99FFCP PHASE2:Hg19::chr12:70464593..70464598,+#_51365aaaa4fb8be05de624c4b74063fap@chr12:70464593..70464598, +
9.37e-99FFCP PHASE1:Hg19::chr12:70464593..70464598,+#_51365aaaa4fb8be05de624c4b74063fap@chr12:70464593..70464598, +
9.37e-99FFCP PHASE1:Hg19::chr6:154858221..154858224,-#_51365aaaa4fb8be05de624c4b74063fap@chr6:154858221..154858224, -
9.37e-99FFCP PHASE1:Hg19::chr4:173014804..173014812,+#_51365aaaa4fb8be05de624c4b74063fap@chr4:173014804..173014812, +
9.37e-99FFCP PHASE2:Hg19::chr6:154858237..154858245,-#_51365aaaa4fb8be05de624c4b74063fap@chr6:154858237..154858245, -
2.55e-98FFCP PHASE2:Hg19::chr6:154858334..154858342,-#_d40babbb820b323bde57e95a9601d846p@chr6:154858334..154858342, -
2.55e-98FFCP PHASE1:Hg19::chr13:93508642..93508652,-#_d40babbb820b323bde57e95a9601d846p@chr13:93508642..93508652, -
2.55e-98FFCP PHASE2:Hg19::chr13:93508642..93508652,-#_d40babbb820b323bde57e95a9601d846p@chr13:93508642..93508652, -
2.55e-98FFCP PHASE2:Hg19::chr6:132980338..132980346,-#_d40babbb820b323bde57e95a9601d846p@chr6:132980338..132980346, -
2.55e-98FFCP PHASE1:Hg19::chr6:154858334..154858342,-#_d40babbb820b323bde57e95a9601d846p@chr6:154858334..154858342, -
2.55e-98FFCP PHASE2:Hg19::chr1:110661599..110661609,-#_d40babbb820b323bde57e95a9601d846p@chr1:110661599..110661609, -
2.55e-98FFCP PHASE1:Hg19::chr6:132980338..132980346,-#_d40babbb820b323bde57e95a9601d846p@chr6:132980338..132980346, -
2.55e-98FFCP PHASE1:Hg19::chr1:110661599..110661609,-#_d40babbb820b323bde57e95a9601d846p@chr1:110661599..110661609, -
2.55e-98FFCP PHASE1:Hg19::chr18:56816249..56816258,+#_d40babbb820b323bde57e95a9601d846p@chr18:56816249..56816258, +
2.55e-98FFCP PHASE2:Hg19::chr18:56816249..56816258,+#_d40babbb820b323bde57e95a9601d846p@chr18:56816249..56816258, +
1.23e-66FFCP PHASE1:Hg19::chr18:7955176..7955183,+#_1175aab72cb275f0fb377ed79f272db4p@chr18:7955176..7955183, +
1.23e-66FFCP PHASE2:Hg19::chr18:7955176..7955183,+#_1175aab72cb275f0fb377ed79f272db4p@chr18:7955176..7955183, +
1.23e-66FFCP PHASE2:Hg19::chr12:70464652..70464662,+#_1175aab72cb275f0fb377ed79f272db4p@chr12:70464652..70464662, +
1.23e-66FFCP PHASE2:Hg19::chr1:110678228..110678236,+#_1175aab72cb275f0fb377ed79f272db4p@chr1:110678228..110678236, +
1.23e-66FFCP PHASE1:Hg19::chr12:70464652..70464662,+#_1175aab72cb275f0fb377ed79f272db4p@chr12:70464652..70464662, +
1.23e-66FFCP PHASE1:Hg19::chr1:110678228..110678236,+#_1175aab72cb275f0fb377ed79f272db4p@chr1:110678228..110678236, +
1.23e-66FFCP PHASE2:Hg19::chr19:7570269..7570273,+#_1175aab72cb275f0fb377ed79f272db4p13@C19orf45
1.23e-66FFCP PHASE2:Hg19::chr9:77257683..77257703,+#_1175aab72cb275f0fb377ed79f272db4p@chr9:77257683..77257703, +
1.23e-66FFCP PHASE1:Hg19::chr19:7570269..7570273,+#_1175aab72cb275f0fb377ed79f272db4p13@C19orf45
1.23e-66FFCP PHASE2:Hg19::chr1:110678110..110678115,+#_1175aab72cb275f0fb377ed79f272db4p@chr1:110678110..110678115, +
1.23e-66FFCP PHASE1:Hg19::chr9:77257683..77257703,+#_1175aab72cb275f0fb377ed79f272db4p@chr9:77257683..77257703, +
1.23e-66FFCP PHASE2:Hg19::chr18:56815158..56815162,+#_1175aab72cb275f0fb377ed79f272db4p@chr18:56815158..56815162, +
1.23e-66FFCP PHASE1:Hg19::chr18:56815158..56815162,+#_1175aab72cb275f0fb377ed79f272db4p@chr18:56815158..56815162, +
1.23e-66FFCP PHASE2:Hg19::chr12:128108552..128108561,+#_1175aab72cb275f0fb377ed79f272db4p1@ENST00000537470
1.23e-66FFCP PHASE1:Hg19::chr12:128108552..128108561,+#_1175aab72cb275f0fb377ed79f272db4p1@ENST00000537470
1.23e-66FFCP PHASE1:Hg19::chr1:110678110..110678115,+#_1175aab72cb275f0fb377ed79f272db4p@chr1:110678110..110678115, +
1.23e-66FFCP PHASE1:Hg19::chr12:127385138..127385144,-#_1175aab72cb275f0fb377ed79f272db4p@chr12:127385138..127385144, -
1.23e-66FFCP PHASE2:Hg19::chr12:127385138..127385144,-#_1175aab72cb275f0fb377ed79f272db4p@chr12:127385138..127385144, -
2.39e-66FFCP PHASE2:Hg19::chr2:159855059..159855068,-#_11633d67b0962510b2009276ce84e1b1p@chr2:159855059..159855068, -
2.39e-66FFCP PHASE2:Hg19::chr4:3310694..3310716,-#_11633d67b0962510b2009276ce84e1b1p@chr4:3310694..3310716, -
2.39e-66FFCP PHASE2:Hg19::chr5:77683792..77683799,+#_11633d67b0962510b2009276ce84e1b1p@chr5:77683792..77683799, +
2.39e-66FFCP PHASE2:Hg19::chr5:104246731..104246738,-#_11633d67b0962510b2009276ce84e1b1p3@ENST00000524336
2.39e-66FFCP PHASE1:Hg19::chr2:159855059..159855068,-#_11633d67b0962510b2009276ce84e1b1p@chr2:159855059..159855068, -
2.39e-66FFCP PHASE2:Hg19::chr1:165198157..165198181,-#_11633d67b0962510b2009276ce84e1b1p@chr1:165198157..165198181, -
2.39e-66FFCP PHASE1:Hg19::chr4:3310694..3310716,-#_11633d67b0962510b2009276ce84e1b1p@chr4:3310694..3310716, -
2.39e-66FFCP PHASE1:Hg19::chr5:77683792..77683799,+#_11633d67b0962510b2009276ce84e1b1p@chr5:77683792..77683799, +
2.39e-66FFCP PHASE2:Hg19::chr7:120381641..120381650,+#_11633d67b0962510b2009276ce84e1b1p@chr7:120381641..120381650, +
2.39e-66FFCP PHASE1:Hg19::chr5:104246731..104246738,-#_11633d67b0962510b2009276ce84e1b1p3@ENST00000524336
2.39e-66FFCP PHASE1:Hg19::chr13:93587956..93587973,+#_11633d67b0962510b2009276ce84e1b1p@chr13:93587956..93587973, +
2.39e-66FFCP PHASE2:Hg19::chr13:93587956..93587973,+#_11633d67b0962510b2009276ce84e1b1p@chr13:93587956..93587973, +
2.39e-66FFCP PHASE2:Hg19::chr15:92459318..92459327,+#_11633d67b0962510b2009276ce84e1b1p@chr15:92459318..92459327, +
2.39e-66FFCP PHASE2:Hg19::chr12:128077388..128077416,+#_11633d67b0962510b2009276ce84e1b1p@chr12:128077388..128077416, +
2.39e-66FFCP PHASE1:Hg19::chr12:128077388..128077416,+#_11633d67b0962510b2009276ce84e1b1p@chr12:128077388..128077416, +
2.39e-66FFCP PHASE1:Hg19::chr1:165198157..165198181,-#_11633d67b0962510b2009276ce84e1b1p@chr1:165198157..165198181, -
2.39e-66FFCP PHASE1:Hg19::chr15:92459318..92459327,+#_11633d67b0962510b2009276ce84e1b1p@chr15:92459318..92459327, +
2.39e-66FFCP PHASE1:Hg19::chr7:120381641..120381650,+#_11633d67b0962510b2009276ce84e1b1p@chr7:120381641..120381650, +
2.39e-66FFCP PHASE1:Hg19::chr18:56816267..56816276,+#_11633d67b0962510b2009276ce84e1b1p@chr18:56816267..56816276, +
2.39e-66FFCP PHASE2:Hg19::chr18:56816267..56816276,+#_11633d67b0962510b2009276ce84e1b1p@chr18:56816267..56816276, +
4.66e-66FFCP PHASE2:Hg19::chr7:120778453..120778458,-#_639c55032daf5776df3081c22d855f24p@chr7:120778453..120778458, -
4.66e-66FFCP PHASE2:Hg19::chr7:100808087..100808104,-#_639c55032daf5776df3081c22d855f24p@chr7:100808087..100808104, -
4.66e-66FFCP PHASE1:Hg19::chr7:120778453..120778458,-#_639c55032daf5776df3081c22d855f24p@chr7:120778453..120778458, -
4.66e-66FFCP PHASE1:Hg19::chr7:100808087..100808104,-#_639c55032daf5776df3081c22d855f24p@chr7:100808087..100808104, -
4.66e-66FFCP PHASE2:Hg19::chr19:51412411..51412426,-#_639c55032daf5776df3081c22d855f24p4@KLK4
4.66e-66FFCP PHASE2:Hg19::chr7:100807523..100807543,+#_639c55032daf5776df3081c22d855f24p@chr7:100807523..100807543, +

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