CL:0000447: Difference between revisions
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{{CL | {{CL | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=CL:0000447 | |||
|is_a=CL:0000151 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=carbohydrate secreting cell | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of= | |part_of= | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | ||
| | |subset= | ||
| | |synonym= | ||
|union_of= | |||
|xref= | |||
}} | }} | ||
Latest revision as of 16:33, 12 September 2014
| Name: | carbohydrate secreting cell |
|---|---|
| Namespace: | FANTOM |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000151(secretory cell) |
|---|
Children
| is a: | CL:0000153 (GAG secreting cell) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 10410-106B5 (extraskeletal myxoid chondrosarcoma cell line:H-EMC-SS)
- 10441-106E9 (synovial sarcoma cell line:HS-SY-II)
- 10700-109G7 (chondrosarcoma cell line:SW 1353)
- 10720-109I9
- 10767-110F2
- 11261-116G1 (Chondrocyte - de diff, donor1)
- 11262-116G2
- 11291-117A4 (Synoviocyte, donor1)
- 11338-117F6 (Chondrocyte - de diff, donor2)
- 11339-117F7 (Chondrocyte - re diff, donor2)
... further results Mouse (Mus musculus)
- 10410-106B5 (extraskeletal myxoid chondrosarcoma cell line:H-EMC-SS)
- 10441-106E9 (synovial sarcoma cell line:HS-SY-II)
- 10700-109G7 (chondrosarcoma cell line:SW 1353)
- 10720-109I9
- 10767-110F2
- 11261-116G1 (Chondrocyte - de diff, donor1)
- 11262-116G2
- 11291-117A4 (Synoviocyte, donor1)
- 11338-117F6 (Chondrocyte - de diff, donor2)
- 11339-117F7 (Chondrocyte - re diff, donor2)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000447 (carbohydrate secreting cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 2.38e-98 | FFCP PHASE1:Hg19::chr15:89402148..89402159,+#_8ef5029bf81db19884d485a2b390695c | p6@ACAN |
| 2.38e-98 | FFCP PHASE2:Hg19::chr15:89402148..89402159,+#_8ef5029bf81db19884d485a2b390695c | p6@ACAN |
| 8.49e-88 | FFCP PHASE2:Hg19::chr15:89402048..89402061,+#_d9f062af9ca6e1a0e9f80453e30e147e | p8@ACAN |
| 8.49e-88 | FFCP PHASE1:Hg19::chr15:89402048..89402061,+#_d9f062af9ca6e1a0e9f80453e30e147e | p8@ACAN |
| 2.08e-87 | FFCP PHASE2:Hg19::chr21:39821025..39821046,-#_653bb3845b9962f16f370d7a58fb9df0 | p9@ERG |
| 2.08e-87 | FFCP PHASE1:Hg19::chr21:39821025..39821046,-#_653bb3845b9962f16f370d7a58fb9df0 | p9@ERG |
| 2.08e-87 | FFCP PHASE1:Hg19::chr1:186273262..186273282,+#_653bb3845b9962f16f370d7a58fb9df0 | p@chr1:186273262..186273282, + |
| 2.08e-87 | FFCP PHASE2:Hg19::chr1:186273262..186273282,+#_653bb3845b9962f16f370d7a58fb9df0 | p@chr1:186273262..186273282, + |
| 2.71e-77 | FFCP PHASE1:Hg19::chr15:89417758..89417770,+#_94eb72b66e800a97ee376cc9f2f4d205 | p@chr15:89417758..89417770, + |
| 2.71e-77 | FFCP PHASE2:Hg19::chr15:89417758..89417770,+#_94eb72b66e800a97ee376cc9f2f4d205 | p@chr15:89417758..89417770, + |
| 2.16e-70 | FFCP PHASE1:Hg19::chr7:150824026..150824027,-#_0d8dc2da414afc7c2fb59b090e4fc286 | p@chr7:150824026..150824027, - |
| 2.16e-70 | FFCP PHASE2:Hg19::chr7:150824026..150824027,-#_0d8dc2da414afc7c2fb59b090e4fc286 | p@chr7:150824026..150824027, - |
| 6.39e-64 | FFCP PHASE1:Hg19::chr15:89381951..89381962,+#_8785e3cde3b98b60d1ed097883db6e38 | p@chr15:89381951..89381962, + |
| 6.39e-64 | FFCP PHASE2:Hg19::chr15:89381951..89381962,+#_8785e3cde3b98b60d1ed097883db6e38 | p@chr15:89381951..89381962, + |
| 2.57e-63 | FFCP PHASE1:Hg19::chr12:57629234..57629249,-#_668cb8392f6cfcdb69bce4bd32b6553f | p@chr12:57629234..57629249, - |
| 2.57e-63 | FFCP PHASE2:Hg19::chr12:57629234..57629249,-#_668cb8392f6cfcdb69bce4bd32b6553f | p@chr12:57629234..57629249, - |
| 4.9e-63 | FFCP PHASE2:Hg19::chr1:203149716..203149729,-#_8baf2933b59205fb6ff4153e95b205b0 | p19@CHI3L1 |
| 4.9e-63 | FFCP PHASE1:Hg19::chr1:203149716..203149729,-#_8baf2933b59205fb6ff4153e95b205b0 | p19@CHI3L1 |
| 6.52e-61 | FFCP PHASE2:Hg19::chr1:186277359..186277362,+#_18fc3224b8306fb7fa9246dd66d9ad91 | p@chr1:186277359..186277362, + |
| 6.52e-61 | FFCP PHASE1:Hg19::chr1:186277359..186277362,+#_18fc3224b8306fb7fa9246dd66d9ad91 | p@chr1:186277359..186277362, + |
| 8.36e-61 | FFCP PHASE1:Hg19::chr1:186276427..186276448,+#_aec64ea875c56d83371904a6f86c0020 | p@chr1:186276427..186276448, + |
| 8.36e-61 | FFCP PHASE2:Hg19::chr1:186276427..186276448,+#_aec64ea875c56d83371904a6f86c0020 | p@chr1:186276427..186276448, + |
| 7.45e-59 | FFCP PHASE2:Hg19::chr1:186277186..186277192,+#_6253151fb643f3bf4768a396195c97b3 | p@chr1:186277186..186277192, + |
| 7.45e-59 | FFCP PHASE1:Hg19::chr1:186277186..186277192,+#_6253151fb643f3bf4768a396195c97b3 | p@chr1:186277186..186277192, + |
| 7.54e-59 | FFCP PHASE1:Hg19::chr1:203154508..203154518,-#_c29296288a6405472f0ab4a08f64ecd9 | p20@CHI3L1 |
| 7.54e-59 | FFCP PHASE2:Hg19::chr1:203154508..203154518,-#_c29296288a6405472f0ab4a08f64ecd9 | p20@CHI3L1 |
| 8.64e-57 | FFCP PHASE1:Hg19::chr12:57629315..57629334,-#_6c85d260ce63bc0e465a5e36abfc171e | p@chr12:57629315..57629334, - |
| 8.64e-57 | FFCP PHASE2:Hg19::chr12:57629315..57629334,-#_6c85d260ce63bc0e465a5e36abfc171e | p@chr12:57629315..57629334, - |
| 8.77e-57 | FFCP PHASE2:Hg19::chr1:203149741..203149762,-#_55e718132c76c2567de7a7f8ea6c0f59 | p14@CHI3L1 |
| 8.77e-57 | FFCP PHASE1:Hg19::chr1:203149741..203149762,-#_55e718132c76c2567de7a7f8ea6c0f59 | p14@CHI3L1 |
| 1.58e-53 | FFCP PHASE1:Hg19::chr1:203152908..203152924,-#_2974a86801e42f85bfcbb8d96ca7e115 | p@chr1:203152908..203152924, - |
| 1.58e-53 | FFCP PHASE2:Hg19::chr1:203152908..203152924,-#_2974a86801e42f85bfcbb8d96ca7e115 | p@chr1:203152908..203152924, - |
| 7.64e-51 | FFCP PHASE1:Hg19::chr1:203148919..203148937,-#_860cd2251297f594bcf3bfd40edbc15e | p16@CHI3L1 |
| 7.64e-51 | FFCP PHASE2:Hg19::chr1:203148919..203148937,-#_860cd2251297f594bcf3bfd40edbc15e | p16@CHI3L1 |
| 1.02e-50 | FFCP PHASE2:Hg19::chr15:89401833..89401842,+#_53d47cae942152372f8fd3ed7520da8e | p10@ACAN |
| 1.02e-50 | FFCP PHASE1:Hg19::chr15:89401833..89401842,+#_53d47cae942152372f8fd3ed7520da8e | p10@ACAN |
| 1.49e-50 | FFCP PHASE1:Hg19::chr7:45956964..45956971,+#_5fb9461a4084731167b84836e66eafe7 | p@chr7:45956964..45956971, + |
| 1.49e-50 | FFCP PHASE2:Hg19::chr7:45956964..45956971,+#_5fb9461a4084731167b84836e66eafe7 | p@chr7:45956964..45956971, + |
| 2.49e-50 | FFCP PHASE2:Hg19::chr8:57359975..57359992,-#_6bbb78d031fd165014fe09519b23ae8c | p@chr8:57359975..57359992, - |
| 2.49e-50 | FFCP PHASE1:Hg19::chr8:57359975..57359992,-#_6bbb78d031fd165014fe09519b23ae8c | p@chr8:57359975..57359992, - |
| 2.77e-50 | FFCP PHASE1:Hg19::chr1:186276386..186276397,+#_fb9c3bbd940776d1fbee40deb8359024 | p@chr1:186276386..186276397, + |
| 2.77e-50 | FFCP PHASE2:Hg19::chr1:186276386..186276397,+#_fb9c3bbd940776d1fbee40deb8359024 | p@chr1:186276386..186276397, + |
| 2.83e-50 | FFCP PHASE2:Hg19::chr8:57353982..57353991,-#_6f0969c16c03182261002c14f22c5f89 | p@chr8:57353982..57353991, - |
| 2.83e-50 | FFCP PHASE1:Hg19::chr8:57353982..57353991,-#_6f0969c16c03182261002c14f22c5f89 | p@chr8:57353982..57353991, - |
| 6.62e-50 | FFCP PHASE1:Hg19::chr18:22150956..22150983,+#_0d1c2f3c0bd5535aabb8a03cacc0113c | p@chr18:22150956..22150983, + |
| 6.62e-50 | FFCP PHASE2:Hg19::chr18:22150956..22150983,+#_0d1c2f3c0bd5535aabb8a03cacc0113c | p@chr18:22150956..22150983, + |
| 7.82e-50 | FFCP PHASE1:Hg19::chr16:66906996..66906997,-#_3c183df6f462b3d42d4a365e2b6447a0 | p@chr16:66906996..66906997, - |
| 7.82e-50 | FFCP PHASE2:Hg19::chr16:66906996..66906997,-#_3c183df6f462b3d42d4a365e2b6447a0 | p@chr16:66906996..66906997, - |
| 9.25e-50 | FFCP PHASE2:Hg19::chr8:57354278..57354286,+#_33ae5a3a3480d0459f251c24829f58c2 | p@chr8:57354278..57354286, + |
| 9.25e-50 | FFCP PHASE1:Hg19::chr8:57354278..57354286,+#_33ae5a3a3480d0459f251c24829f58c2 | p@chr8:57354278..57354286, + |
| 1.07e-49 | FFCP PHASE1:Hg19::chr7:45954480..45954494,+#_15d08c623ee8921cb9820f8b281e935a | p@chr7:45954480..45954494, + |
| 1.07e-49 | FFCP PHASE2:Hg19::chr7:45954480..45954494,+#_15d08c623ee8921cb9820f8b281e935a | p@chr7:45954480..45954494, + |
| 4.1e-49 | FFCP PHASE1:Hg19::chr1:203148495..203148505,-#_a81184f9c73b512fa55c248819cf7327 | p13@CHI3L1 |
| 4.1e-49 | FFCP PHASE2:Hg19::chr1:203148495..203148505,-#_a81184f9c73b512fa55c248819cf7327 | p13@CHI3L1 |
| 5.08e-49 | FFCP PHASE1:Hg19::chr21:40033695..40033712,-#_86340ea21c19f35cf45bddd6987a4269 | p6@ERG |
| 5.08e-49 | FFCP PHASE2:Hg19::chr21:40033695..40033712,-#_86340ea21c19f35cf45bddd6987a4269 | p6@ERG |
| 6.99e-47 | FFCP PHASE1:Hg19::chr1:203150369..203150408,-#_1651db2b386223c528e8bf80c5cac302 | p@chr1:203150369..203150408, - |
| 6.99e-47 | FFCP PHASE2:Hg19::chr1:203150369..203150408,-#_1651db2b386223c528e8bf80c5cac302 | p@chr1:203150369..203150408, - |
| 8.02e-47 | FFCP PHASE1:Hg19::chr1:186276857..186276868,+#_169e9180881d1366d1edaf6d03cb2c93 | p@chr1:186276857..186276868, + |
| 8.02e-47 | FFCP PHASE2:Hg19::chr1:186276857..186276868,+#_169e9180881d1366d1edaf6d03cb2c93 | p@chr1:186276857..186276868, + |
| 8.58e-47 | FFCP PHASE2:Hg19::chr1:203151934..203151947,-#_a5af27d998d325747508d8514b57f806 | p7@CHI3L1 |
| 8.58e-47 | FFCP PHASE2:Hg19::chr1:203148428..203148437,-#_a5af27d998d325747508d8514b57f806 | p11@CHI3L1 |
| 8.58e-47 | FFCP PHASE1:Hg19::chr1:203151934..203151947,-#_a5af27d998d325747508d8514b57f806 | p7@CHI3L1 |
| 8.58e-47 | FFCP PHASE1:Hg19::chr1:203148428..203148437,-#_a5af27d998d325747508d8514b57f806 | p11@CHI3L1 |
| 1.39e-46 | FFCP PHASE1:Hg19::chr7:45952836..45952875,+#_6b5a2d87e781262fcdc8fb3490840df4 | p@chr7:45952836..45952875, + |
| 1.39e-46 | FFCP PHASE2:Hg19::chr7:45952836..45952875,+#_6b5a2d87e781262fcdc8fb3490840df4 | p@chr7:45952836..45952875, + |
| 1.9e-46 | FFCP PHASE1:Hg19::chr1:203148907..203148922,+#_0a1e12bf35889e9b801bf5b0ff7c773a | p@chr1:203148907..203148922, + |
| 1.9e-46 | FFCP PHASE2:Hg19::chr1:203148907..203148922,+#_0a1e12bf35889e9b801bf5b0ff7c773a | p@chr1:203148907..203148922, + |
| 2.06e-46 | FFCP PHASE1:Hg19::chr1:203148057..203148072,+#_fdf5e3bf42464ae835f638faf104edea | p@chr1:203148057..203148072, + |
| 2.06e-46 | FFCP PHASE2:Hg19::chr1:203148057..203148072,+#_fdf5e3bf42464ae835f638faf104edea | p@chr1:203148057..203148072, + |
| 2.24e-45 | FFCP PHASE1:Hg19::chr1:203154342..203154363,-#_54a4920778ac099257077e65225375e1 | p9@CHI3L1 |
| 2.24e-45 | FFCP PHASE2:Hg19::chr1:203154342..203154363,-#_54a4920778ac099257077e65225375e1 | p9@CHI3L1 |
| 9.75e-45 | FFCP PHASE2:Hg19::chr21:40033882..40033887,-#_d637ca4fdb66c526f01ee215c22108ef | p21@ERG |
| 9.75e-45 | FFCP PHASE1:Hg19::chr12:57628728..57628739,-#_d637ca4fdb66c526f01ee215c22108ef | p@chr12:57628728..57628739, - |
| 9.75e-45 | FFCP PHASE2:Hg19::chr12:57628728..57628739,-#_d637ca4fdb66c526f01ee215c22108ef | p@chr12:57628728..57628739, - |
| 9.75e-45 | FFCP PHASE1:Hg19::chr1:172145683..172145699,+#_d637ca4fdb66c526f01ee215c22108ef | p@chr1:172145683..172145699, + |
| 9.75e-45 | FFCP PHASE1:Hg19::chr8:37535618..37535621,+#_d637ca4fdb66c526f01ee215c22108ef | p@chr8:37535618..37535621, + |
| 9.75e-45 | FFCP PHASE1:Hg19::chr21:40033882..40033887,-#_d637ca4fdb66c526f01ee215c22108ef | p21@ERG |
| 9.75e-45 | FFCP PHASE2:Hg19::chr1:172145683..172145699,+#_d637ca4fdb66c526f01ee215c22108ef | p@chr1:172145683..172145699, + |
| 9.75e-45 | FFCP PHASE2:Hg19::chr8:37535618..37535621,+#_d637ca4fdb66c526f01ee215c22108ef | p@chr8:37535618..37535621, + |
| 1.31e-44 | FFCP PHASE2:Hg19::chr1:203148612..203148623,-#_1eeb74c934a6630f1b7ba84e4b1f640b | p12@CHI3L1 |
| 1.31e-44 | FFCP PHASE1:Hg19::chr1:203148612..203148623,-#_1eeb74c934a6630f1b7ba84e4b1f640b | p12@CHI3L1 |
| 1.82e-44 | FFCP PHASE2:Hg19::chr1:186276499..186276506,+#_5ad4aab5ac9041c7f4f504493f006748 | p@chr1:186276499..186276506, + |
| 1.82e-44 | FFCP PHASE1:Hg19::chr1:186276499..186276506,+#_5ad4aab5ac9041c7f4f504493f006748 | p@chr1:186276499..186276506, + |
| 1.27e-42 | FFCP PHASE2:Hg19::chr1:186275953..186275985,-#_5f73e917fce97f04027c52546534714d | p@chr1:186275953..186275985, - |
| 1.27e-42 | FFCP PHASE1:Hg19::chr1:186275953..186275985,-#_5f73e917fce97f04027c52546534714d | p@chr1:186275953..186275985, - |
| 1.65e-42 | FFCP PHASE2:Hg19::chr2:38466712..38466722,-#_d447e8a54a52609ae237ac02594b148c | p4@ENST00000450854 |
| 1.65e-42 | FFCP PHASE1:Hg19::chr2:38466712..38466722,-#_d447e8a54a52609ae237ac02594b148c | p4@ENST00000450854 |
| 3.11e-42 | FFCP PHASE1:Hg19::chr1:186277391..186277396,+#_a1b83ca76ab266c57dd1544532dfdb76 | p@chr1:186277391..186277396, + |
| 3.11e-42 | FFCP PHASE2:Hg19::chr1:186277391..186277396,+#_a1b83ca76ab266c57dd1544532dfdb76 | p@chr1:186277391..186277396, + |
| 3.67e-42 | FFCP PHASE2:Hg19::chr21:40032558..40032578,-#_9eedbd408cb6d3a40feeaacf397f9491 | p5@ERG |
| 3.67e-42 | FFCP PHASE1:Hg19::chr21:40032558..40032578,-#_9eedbd408cb6d3a40feeaacf397f9491 | p5@ERG |
| 5.01e-42 | FFCP PHASE2:Hg19::chr1:203151964..203151973,-#_5eebaff3a5c420e1a5201aac6dddc25e | p21@CHI3L1 |
| 5.01e-42 | FFCP PHASE1:Hg19::chr1:203151964..203151973,-#_5eebaff3a5c420e1a5201aac6dddc25e | p21@CHI3L1 |
| 5.48e-42 | FFCP PHASE1:Hg19::chr1:186275628..186275643,+#_420f79cc56dd9ba8667fe1c1f222646f | p@chr1:186275628..186275643, + |
| 5.48e-42 | FFCP PHASE2:Hg19::chr1:186275628..186275643,+#_420f79cc56dd9ba8667fe1c1f222646f | p@chr1:186275628..186275643, + |
| 1.31e-41 | FFCP PHASE2:Hg19::chr11:73003801..73003812,+#_4485ee28bcf9cfe84a88c86eae1caf32 | p5@P2RY6 |
| 1.31e-41 | FFCP PHASE1:Hg19::chr11:73003801..73003812,+#_4485ee28bcf9cfe84a88c86eae1caf32 | p5@P2RY6 |
| 1.47e-41 | FFCP PHASE1:Hg19::chr1:203151897..203151908,-#_17895d8aa93e5c39eb59c684076c946a | p15@CHI3L1 |
| 1.47e-41 | FFCP PHASE2:Hg19::chr1:203151897..203151908,-#_17895d8aa93e5c39eb59c684076c946a | p15@CHI3L1 |
