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{{CL
{{CL
|id=CL:0002262
|alt_id=CL:1000403
|name=endothelial cell of sinusoid
|namespace=cell
|def="An endothelial cell that lines any of the venous cavities through which blood passes in various glands and organs such as the spleen and liver." [GOC:tfm, ISBN:0618947256]
|xref=FMA:63134
|is_a=CL:0000115
|synonym=
|comment=
|comment=
|alt_id=CL:1000403
|disjoint_from=
|union_of=
|created_by=tmeehan
|created_by=tmeehan
|obo_creation_date=2010-09-14T10:57:26Z
|def="An endothelial cell that lines any of the venous cavities through which blood passes in various glands and organs such as the spleen and liver." [GOC:tfm, ISBN:0618947256]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0002262
|is_a=CL:0000115
|is_obsolete=
|located_in=
|located_in=
|part_of=
|name=endothelial cell of sinusoid
|namespace=FANTOM
|obo_creation_date=2010-09-14T10:57:26Z
|part_of=UBERON:0003909
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=FMA:63134
}}
}}

Latest revision as of 16:41, 12 September 2014

Name:endothelial cell of sinusoid
Namespace:FANTOM
Definition:"An endothelial cell that lines any of the venous cavities through which blood passes in various glands and organs such as the spleen and liver." [GOC:tfm, ISBN:0618947256]
Xrefs:
links:
FMA:63134
Alt_id: CL:1000403
Created by:tmeehan
Creation date:2010-09-14T10:57:26Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000115(endothelial cell)
part_of:UBERON:0003909(sinusoid)



Children


is a:CL:1000398 (endothelial cell of hepatic sinusoid)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002262 (endothelial cell of sinusoid), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
8.99e-131FFCP PHASE1:Hg19::chr7:158330204..158330217,+#_39a14e872ad16e53a4584126632e1c9fp2@ENST00000448698
8.99e-131FFCP PHASE2:Hg19::chr7:158330204..158330217,+#_39a14e872ad16e53a4584126632e1c9fp2@ENST00000448698
3.07e-86FFCP PHASE1:Mm9::chr8:3311867..3311873,+#_f7085926695310bcdd36d5f7658fb7b6p@chr8:3311867..3311873, +
3.07e-86FFCP PHASE1:Mm9::chr18:35881716..35881727,-#_f7085926695310bcdd36d5f7658fb7b6p@chr18:35881716..35881727, -
3.07e-86FFCP PHASE1:Mm9::chr13:96429295..96429302,-#_f7085926695310bcdd36d5f7658fb7b6p@chr13:96429295..96429302, -
3.07e-86FFCP PHASE2:Mm9::chr13:96429602..96429605,-#_f7085926695310bcdd36d5f7658fb7b6p@chr13:96429602..96429605, -
3.07e-86FFCP PHASE2:Mm9::chr17:35106363..35106372,-#_f7085926695310bcdd36d5f7658fb7b6p@chr17:35106363..35106372, -
3.07e-86FFCP PHASE2:Mm9::chr7:118133901..118133904,-#_f7085926695310bcdd36d5f7658fb7b6p@chr7:118133901..118133904, -
3.07e-86FFCP PHASE1:Mm9::chr8:87745380..87745385,+#_f7085926695310bcdd36d5f7658fb7b6p@chr8:87745380..87745385, +
3.07e-86FFCP PHASE1:Mm9::chr13:113543694..113543702,-#_f7085926695310bcdd36d5f7658fb7b6p@chr13:113543694..113543702, -
3.07e-86FFCP PHASE2:Mm9::chr10:60279719..60279737,-#_f7085926695310bcdd36d5f7658fb7b6p@chr10:60279719..60279737, -
3.07e-86FFCP PHASE2:Mm9::chr1:163794592..163794593,+#_f7085926695310bcdd36d5f7658fb7b6p@chr1:163794592..163794593, +
3.07e-86FFCP PHASE1:Mm9::chr10:60279719..60279737,-#_f7085926695310bcdd36d5f7658fb7b6p@chr10:60279719..60279737, -
3.07e-86FFCP PHASE2:Mm9::chr4:100890388..100890423,+#_f7085926695310bcdd36d5f7658fb7b6p@chr4:100890388..100890423, +
3.07e-86FFCP PHASE2:Mm9::chr12:86691503..86691504,-#_f7085926695310bcdd36d5f7658fb7b6p@chr12:86691503..86691504, -
3.07e-86FFCP PHASE1:Mm9::chr9:42915101..42915106,-#_f7085926695310bcdd36d5f7658fb7b6p@chr9:42915101..42915106, -
3.07e-86FFCP PHASE1:Mm9::chr5:53111093..53111095,+#_f7085926695310bcdd36d5f7658fb7b6p@chr5:53111093..53111095, +
3.07e-86FFCP PHASE2:Mm9::chr15:88669906..88669914,+#_f7085926695310bcdd36d5f7658fb7b6p@chr15:88669906..88669914, +
3.07e-86FFCP PHASE2:Mm9::chr5:76329688..76329692,-#_f7085926695310bcdd36d5f7658fb7b6p@chr5:76329688..76329692, -
3.07e-86FFCP PHASE2:Mm9::chr7:117101788..117101793,+#_f7085926695310bcdd36d5f7658fb7b6p@chr7:117101788..117101793, +
3.07e-86FFCP PHASE1:Mm9::chr8:86713876..86713879,+#_f7085926695310bcdd36d5f7658fb7b6p@chr8:86713876..86713879, +
3.07e-86FFCP PHASE1:Mm9::chr10:117419958..117419964,+#_f7085926695310bcdd36d5f7658fb7b6p@chr10:117419958..117419964, +
3.07e-86FFCP PHASE1:Mm9::chr12:74684893..74684910,-#_f7085926695310bcdd36d5f7658fb7b6p@chr12:74684893..74684910, -
3.07e-86FFCP PHASE1:Mm9::chrX:166418658..166418683,+#_f7085926695310bcdd36d5f7658fb7b6p@chrX:166418658..166418683, +
3.07e-86FFCP PHASE2:Mm9::chr7:109031260..109031268,+#_f7085926695310bcdd36d5f7658fb7b6p@chr7:109031260..109031268, +
3.07e-86FFCP PHASE2:Mm9::chr11:68437375..68437378,+#_f7085926695310bcdd36d5f7658fb7b6p@chr11:68437375..68437378, +
3.07e-86FFCP PHASE1:Mm9::chr1:66883923..66883955,-#_f7085926695310bcdd36d5f7658fb7b6p@chr1:66883923..66883955, -
3.07e-86FFCP PHASE2:Mm9::chr17:34798597..34798606,+#_f7085926695310bcdd36d5f7658fb7b6p@chr17:34798597..34798606, +
3.07e-86FFCP PHASE2:Mm9::chr5:75375903..75375931,+#_f7085926695310bcdd36d5f7658fb7b6p@chr5:75375903..75375931, +
3.07e-86FFCP PHASE2:Mm9::chr10:93499468..93499494,-#_f7085926695310bcdd36d5f7658fb7b6p@chr10:93499468..93499494, -
3.07e-86FFCP PHASE1:Mm9::chr17:35096519..35096524,+#_f7085926695310bcdd36d5f7658fb7b6p@chr17:35096519..35096524, +
3.07e-86FFCP PHASE1:Mm9::chr16:28911901..28911906,-#_f7085926695310bcdd36d5f7658fb7b6p@chr16:28911901..28911906, -
3.07e-86FFCP PHASE2:Mm9::chr6:15678147..15678149,-#_f7085926695310bcdd36d5f7658fb7b6p@chr6:15678147..15678149, -
3.07e-86FFCP PHASE2:Mm9::chr8:11183699..11183703,-#_f7085926695310bcdd36d5f7658fb7b6p@chr8:11183699..11183703, -
3.07e-86FFCP PHASE2:Mm9::chr17:35945332..35945335,+#_f7085926695310bcdd36d5f7658fb7b6p@chr17:35945332..35945335, +
3.07e-86FFCP PHASE2:Mm9::chr9:116223548..116223551,+#_f7085926695310bcdd36d5f7658fb7b6p@chr9:116223548..116223551, +
3.07e-86FFCP PHASE1:Mm9::chr17:12388232..12388237,+#_f7085926695310bcdd36d5f7658fb7b6p@chr17:12388232..12388237, +
3.07e-86FFCP PHASE2:Mm9::chrX:166418658..166418683,+#_f7085926695310bcdd36d5f7658fb7b6p@chrX:166418658..166418683, +
3.07e-86FFCP PHASE2:Mm9::chr18:39513150..39513152,+#_f7085926695310bcdd36d5f7658fb7b6p@chr18:39513150..39513152, +
3.07e-86FFCP PHASE2:Mm9::chr13:113053257..113053258,+#_f7085926695310bcdd36d5f7658fb7b6p@chr13:113053257..113053258, +
3.07e-86FFCP PHASE1:Mm9::chr10:85585949..85585969,-#_f7085926695310bcdd36d5f7658fb7b6p@chr10:85585949..85585969, -
3.07e-86FFCP PHASE1:Mm9::chr10:21389022..21389032,+#_f7085926695310bcdd36d5f7658fb7b6p@chr10:21389022..21389032, +
3.07e-86FFCP PHASE1:Mm9::chr8:114123814..114123821,-#_f7085926695310bcdd36d5f7658fb7b6p@chr8:114123814..114123821, -
3.07e-86FFCP PHASE2:Mm9::chr16:85547242..85547252,+#_f7085926695310bcdd36d5f7658fb7b6p@chr16:85547242..85547252, +
3.07e-86FFCP PHASE2:Mm9::chr8:3311867..3311873,+#_f7085926695310bcdd36d5f7658fb7b6p@chr8:3311867..3311873, +
3.07e-86FFCP PHASE2:Mm9::chr9:42915185..42915192,-#_f7085926695310bcdd36d5f7658fb7b6p@chr9:42915185..42915192, -
3.07e-86FFCP PHASE2:Mm9::chr1:137570295..137570315,+#_f7085926695310bcdd36d5f7658fb7b6p@chr1:137570295..137570315, +
3.07e-86FFCP PHASE2:Mm9::chr5:33088768..33088773,+#_f7085926695310bcdd36d5f7658fb7b6p@chr5:33088768..33088773, +
3.07e-86FFCP PHASE2:Mm9::chr6:48398664..48398684,-#_f7085926695310bcdd36d5f7658fb7b6p@chr6:48398664..48398684, -
3.07e-86FFCP PHASE1:Mm9::chr12:100752983..100752984,+#_f7085926695310bcdd36d5f7658fb7b6p@chr12:100752983..100752984, +
3.07e-86FFCP PHASE2:Mm9::chr17:35094068..35094092,-#_f7085926695310bcdd36d5f7658fb7b6p@chr17:35094068..35094092, -
3.07e-86FFCP PHASE1:Mm9::chr4:126939557..126939562,+#_f7085926695310bcdd36d5f7658fb7b6p@chr4:126939557..126939562, +
3.07e-86FFCP PHASE2:Mm9::chr14:101778294..101778296,+#_f7085926695310bcdd36d5f7658fb7b6p@chr14:101778294..101778296, +
3.07e-86FFCP PHASE1:Mm9::chr3:121593688..121593695,+#_f7085926695310bcdd36d5f7658fb7b6p@chr3:121593688..121593695, +
3.07e-86FFCP PHASE2:Mm9::chr11:119254092..119254100,-#_f7085926695310bcdd36d5f7658fb7b6p@chr11:119254092..119254100, -
3.07e-86FFCP PHASE1:Mm9::chr12:86691530..86691535,-#_f7085926695310bcdd36d5f7658fb7b6p@chr12:86691530..86691535, -
3.07e-86FFCP PHASE2:Mm9::chr18:4336287..4336296,-#_f7085926695310bcdd36d5f7658fb7b6p8@Map3k8
3.07e-86FFCP PHASE1:Mm9::chr15:90508949..90508955,-#_f7085926695310bcdd36d5f7658fb7b6p@chr15:90508949..90508955, -
3.07e-86FFCP PHASE2:Mm9::chr13:113550715..113550722,-#_f7085926695310bcdd36d5f7658fb7b6p@chr13:113550715..113550722, -
3.07e-86FFCP PHASE1:Mm9::chr5:114422970..114422985,-#_f7085926695310bcdd36d5f7658fb7b6p@chr5:114422970..114422985, -
3.07e-86FFCP PHASE1:Mm9::chr18:60398371..60398393,-#_f7085926695310bcdd36d5f7658fb7b6p@chr18:60398371..60398393, -
3.07e-86FFCP PHASE2:Mm9::chr11:117829935..117829959,-#_f7085926695310bcdd36d5f7658fb7b6p@chr11:117829935..117829959, -
3.07e-86FFCP PHASE2:Mm9::chr12:87046930..87046933,+#_f7085926695310bcdd36d5f7658fb7b6p@chr12:87046930..87046933, +
3.07e-86FFCP PHASE2:Mm9::chr10:93942324..93942342,-#_f7085926695310bcdd36d5f7658fb7b6p@chr10:93942324..93942342, -
3.07e-86FFCP PHASE2:Mm9::chr18:47491114..47491123,+#_f7085926695310bcdd36d5f7658fb7b6p@chr18:47491114..47491123, +
3.07e-86FFCP PHASE1:Mm9::chr9:116223548..116223551,+#_f7085926695310bcdd36d5f7658fb7b6p@chr9:116223548..116223551, +
3.07e-86FFCP PHASE2:Mm9::chr15:82193340..82193343,+#_f7085926695310bcdd36d5f7658fb7b6p@chr15:82193340..82193343, +
3.07e-86FFCP PHASE1:Mm9::chr15:82207617..82207621,+#_f7085926695310bcdd36d5f7658fb7b6p@chr15:82207617..82207621, +
3.07e-86FFCP PHASE1:Mm9::chr18:39513150..39513152,+#_f7085926695310bcdd36d5f7658fb7b6p@chr18:39513150..39513152, +
3.07e-86FFCP PHASE2:Mm9::chr1:138241693..138241697,+#_f7085926695310bcdd36d5f7658fb7b6p@chr1:138241693..138241697, +
3.07e-86FFCP PHASE1:Mm9::chr17:35093616..35093631,-#_f7085926695310bcdd36d5f7658fb7b6p@chr17:35093616..35093631, -
3.07e-86FFCP PHASE2:Mm9::chr4:62009160..62009164,-#_f7085926695310bcdd36d5f7658fb7b6p@chr4:62009160..62009164, -
3.07e-86FFCP PHASE2:Mm9::chr10:21389022..21389032,+#_f7085926695310bcdd36d5f7658fb7b6p@chr10:21389022..21389032, +
3.07e-86FFCP PHASE1:Mm9::chr5:124112234..124112240,+#_f7085926695310bcdd36d5f7658fb7b6p@chr5:124112234..124112240, +
3.07e-86FFCP PHASE2:Mm9::chr15:82207617..82207621,+#_f7085926695310bcdd36d5f7658fb7b6p@chr15:82207617..82207621, +
3.07e-86FFCP PHASE1:Mm9::chr11:107196799..107196814,+#_f7085926695310bcdd36d5f7658fb7b6p@chr11:107196799..107196814, +
3.07e-86FFCP PHASE2:Mm9::chr10:85587155..85587188,+#_f7085926695310bcdd36d5f7658fb7b6p@chr10:85587155..85587188, +
3.07e-86FFCP PHASE2:Mm9::chr11:109223756..109223764,-#_f7085926695310bcdd36d5f7658fb7b6p@chr11:109223756..109223764, -
3.07e-86FFCP PHASE2:Mm9::chr13:5840965..5840966,+#_f7085926695310bcdd36d5f7658fb7b6p@chr13:5840965..5840966, +
3.07e-86FFCP PHASE1:Mm9::chr3:90270007..90270012,+#_f7085926695310bcdd36d5f7658fb7b6p@chr3:90270007..90270012, +
3.07e-86FFCP PHASE1:Mm9::chr13:96429602..96429605,-#_f7085926695310bcdd36d5f7658fb7b6p@chr13:96429602..96429605, -
3.07e-86FFCP PHASE1:Mm9::chr11:54785454..54785456,-#_f7085926695310bcdd36d5f7658fb7b6p@chr11:54785454..54785456, -
3.07e-86FFCP PHASE2:Mm9::chr17:35106749..35106752,-#_f7085926695310bcdd36d5f7658fb7b6p@chr17:35106749..35106752, -
3.07e-86FFCP PHASE2:Mm9::chr2:169549462..169549477,+#_f7085926695310bcdd36d5f7658fb7b6p@chr2:169549462..169549477, +
3.07e-86FFCP PHASE1:Mm9::chr13:113550715..113550722,-#_f7085926695310bcdd36d5f7658fb7b6p@chr13:113550715..113550722, -
3.07e-86FFCP PHASE2:Mm9::chr12:88237840..88237851,-#_f7085926695310bcdd36d5f7658fb7b6p@chr12:88237840..88237851, -
3.07e-86FFCP PHASE1:Mm9::chr4:137487112..137487117,+#_f7085926695310bcdd36d5f7658fb7b6p@chr4:137487112..137487117, +
3.07e-86FFCP PHASE2:Mm9::chr8:111108947..111108951,+#_f7085926695310bcdd36d5f7658fb7b6p@chr8:111108947..111108951, +
3.07e-86FFCP PHASE2:Mm9::chr6:91441074..91441080,-#_f7085926695310bcdd36d5f7658fb7b6p@chr6:91441074..91441080, -
3.07e-86FFCP PHASE1:Mm9::chr16:85547242..85547252,+#_f7085926695310bcdd36d5f7658fb7b6p@chr16:85547242..85547252, +
3.07e-86FFCP PHASE1:Mm9::chr15:59435855..59435878,-#_f7085926695310bcdd36d5f7658fb7b6p@chr15:59435855..59435878, -
3.07e-86FFCP PHASE2:Mm9::chr4:141645056..141645068,+#_f7085926695310bcdd36d5f7658fb7b6p@chr4:141645056..141645068, +
3.07e-86FFCP PHASE1:Mm9::chr8:25530071..25530072,+#_f7085926695310bcdd36d5f7658fb7b6p@chr8:25530071..25530072, +
3.07e-86FFCP PHASE2:Mm9::chr12:86691530..86691535,-#_f7085926695310bcdd36d5f7658fb7b6p@chr12:86691530..86691535, -
3.07e-86FFCP PHASE1:Mm9::chr9:42915185..42915192,-#_f7085926695310bcdd36d5f7658fb7b6p@chr9:42915185..42915192, -
3.07e-86FFCP PHASE2:Mm9::chr17:35093377..35093381,+#_f7085926695310bcdd36d5f7658fb7b6p@chr17:35093377..35093381, +
3.07e-86FFCP PHASE2:Mm9::chr2:129407463..129407468,-#_f7085926695310bcdd36d5f7658fb7b6p@chr2:129407463..129407468, -
3.07e-86FFCP PHASE1:Mm9::chr3:104857794..104857802,-#_f7085926695310bcdd36d5f7658fb7b6p@chr3:104857794..104857802, -
3.07e-86FFCP PHASE2:Mm9::chr6:51831254..51831256,-#_f7085926695310bcdd36d5f7658fb7b6p@chr6:51831254..51831256, -
3.07e-86FFCP PHASE2:Mm9::chr3:104857794..104857802,-#_f7085926695310bcdd36d5f7658fb7b6p@chr3:104857794..104857802, -

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