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{{CL
{{CL
|id=CL:0002351
|alt_id=
|name=progenitor cell of endocrine pancreas
|namespace=cell;;efo
|def="A multi-fate stem cell that is able to differentiate into the pancreas alpha, beta and delta endocrine cells. This cell type expresses neurogenin-3 and��Isl-1." [GOC:tfm, PMID:20025937, PMID:20217494]
|xref=
|is_a=CL:0000048;;EFO:0002966
|synonym="pancreatic endocrine progenitor" EXACT [];;"pancreatic islet progenitor cell" EXACT []
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=tmeehan
|created_by=tmeehan
|obo_creation_date=2010-09-21T04:41:06Z
|def="A multi-fate stem cell that is able to differentiate into the pancreas alpha, beta and delta endocrine cells. This cell type expresses neurogenin-3 and��Isl-1." [GOC:tfm, PMID:20025937, PMID:20217494]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0002351
|is_a=CL:0000048
|is_obsolete=
|located_in=
|located_in=
|name=progenitor cell of endocrine pancreas
|namespace=FANTOM
|obo_creation_date=2010-09-21T04:41:06Z
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="pancreatic endocrine progenitor" EXACT [];;"pancreatic islet progenitor cell" EXACT []
|union_of=
|xref=
}}
}}

Latest revision as of 16:42, 12 September 2014

Name:progenitor cell of endocrine pancreas
Namespace:FANTOM
Definition:"A multi-fate stem cell that is able to differentiate into the pancreas alpha, beta and delta endocrine cells. This cell type expresses neurogenin-3 and��Isl-1." [GOC:tfm, PMID:20025937, PMID:20217494]
Synonyms: "pancreatic endocrine progenitor" EXACT []
"pancreatic islet progenitor cell" EXACT []
Created by:tmeehan
Creation date:2010-09-21T04:41:06Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000048(multi fate stem cell)



Children


develops from:CL:0000169 (type B pancreatic cell),CL:0000173 (pancreatic D cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.



Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002351 (progenitor cell of endocrine pancreas), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
5.42e-195FFCP PHASE2:Hg19::chr9:77257468..77257474,-#_78bd1c6af8ee931eceea75edb8a7713ap@chr9:77257468..77257474, -
5.42e-195FFCP PHASE1:Hg19::chr6:50692244..50692251,+#_78bd1c6af8ee931eceea75edb8a7713ap@chr6:50692244..50692251, +
5.42e-195FFCP PHASE1:Hg19::chr1:193232144..193232147,+#_78bd1c6af8ee931eceea75edb8a7713ap@chr1:193232144..193232147, +
5.42e-195FFCP PHASE1:Hg19::chr9:96678236..96678246,-#_78bd1c6af8ee931eceea75edb8a7713ap@chr9:96678236..96678246, -
5.42e-195FFCP PHASE1:Hg19::chr20:20173664..20173680,+#_78bd1c6af8ee931eceea75edb8a7713ap@chr20:20173664..20173680, +
5.42e-195FFCP PHASE1:Hg19::chr1:193186161..193186169,-#_78bd1c6af8ee931eceea75edb8a7713ap@chr1:193186161..193186169, -
5.42e-195FFCP PHASE1:Hg19::chr9:77257468..77257474,-#_78bd1c6af8ee931eceea75edb8a7713ap@chr9:77257468..77257474, -
5.42e-195FFCP PHASE2:Hg19::chr1:193232079..193232084,+#_78bd1c6af8ee931eceea75edb8a7713ap@chr1:193232079..193232084, +
5.42e-195FFCP PHASE2:Hg19::chr12:70464665..70464668,+#_78bd1c6af8ee931eceea75edb8a7713ap@chr12:70464665..70464668, +
5.42e-195FFCP PHASE1:Hg19::chr10:120200137..120200154,+#_78bd1c6af8ee931eceea75edb8a7713ap@chr10:120200137..120200154, +
5.42e-195FFCP PHASE1:Hg19::chr18:56815879..56815901,+#_78bd1c6af8ee931eceea75edb8a7713ap@chr18:56815879..56815901, +
5.42e-195FFCP PHASE2:Hg19::chr18:56815879..56815901,+#_78bd1c6af8ee931eceea75edb8a7713ap@chr18:56815879..56815901, +
5.42e-195FFCP PHASE1:Hg19::chr1:193232079..193232084,+#_78bd1c6af8ee931eceea75edb8a7713ap@chr1:193232079..193232084, +
5.42e-195FFCP PHASE2:Hg19::chr6:50692244..50692251,+#_78bd1c6af8ee931eceea75edb8a7713ap@chr6:50692244..50692251, +
5.42e-195FFCP PHASE2:Hg19::chr1:193232144..193232147,+#_78bd1c6af8ee931eceea75edb8a7713ap@chr1:193232144..193232147, +
5.42e-195FFCP PHASE2:Hg19::chr10:120200137..120200154,+#_78bd1c6af8ee931eceea75edb8a7713ap@chr10:120200137..120200154, +
5.42e-195FFCP PHASE2:Hg19::chr1:193186161..193186169,-#_78bd1c6af8ee931eceea75edb8a7713ap@chr1:193186161..193186169, -
5.42e-195FFCP PHASE1:Hg19::chr12:70464665..70464668,+#_78bd1c6af8ee931eceea75edb8a7713ap@chr12:70464665..70464668, +
5.42e-195FFCP PHASE2:Hg19::chr20:20173664..20173680,+#_78bd1c6af8ee931eceea75edb8a7713ap@chr20:20173664..20173680, +
5.42e-195FFCP PHASE2:Hg19::chr9:96678236..96678246,-#_78bd1c6af8ee931eceea75edb8a7713ap@chr9:96678236..96678246, -
9.37e-99FFCP PHASE1:Hg19::chr9:77257424..77257435,-#_c07c2b762403a71a84dd7174e0436d24p@chr9:77257424..77257435, -
9.37e-99FFCP PHASE2:Hg19::chr1:193186195..193186210,-#_c07c2b762403a71a84dd7174e0436d24p@chr1:193186195..193186210, -
9.37e-99FFCP PHASE1:Hg19::chr12:70464675..70464680,+#_c07c2b762403a71a84dd7174e0436d24p@chr12:70464675..70464680, +
9.37e-99FFCP PHASE1:Hg19::chr6:161970049..161970057,-#_c07c2b762403a71a84dd7174e0436d24p3@GU361471
9.37e-99FFCP PHASE2:Hg19::chr4:59982412..59982425,+#_c07c2b762403a71a84dd7174e0436d24p@chr4:59982412..59982425, +
9.37e-99FFCP PHASE1:Hg19::chr6:154858237..154858245,-#_c07c2b762403a71a84dd7174e0436d24p@chr6:154858237..154858245, -
9.37e-99FFCP PHASE1:Hg19::chr4:59982412..59982425,+#_c07c2b762403a71a84dd7174e0436d24p@chr4:59982412..59982425, +
9.37e-99FFCP PHASE1:Hg19::chr1:193186195..193186210,-#_c07c2b762403a71a84dd7174e0436d24p@chr1:193186195..193186210, -
9.37e-99FFCP PHASE1:Hg19::chr18:56813724..56813731,+#_c07c2b762403a71a84dd7174e0436d24p@chr18:56813724..56813731, +
9.37e-99FFCP PHASE1:Hg19::chr12:70464593..70464598,+#_c07c2b762403a71a84dd7174e0436d24p@chr12:70464593..70464598, +
9.37e-99FFCP PHASE2:Hg19::chr18:56813724..56813731,+#_c07c2b762403a71a84dd7174e0436d24p@chr18:56813724..56813731, +
9.37e-99FFCP PHASE2:Hg19::chr4:139208173..139208199,-#_c07c2b762403a71a84dd7174e0436d24p@chr4:139208173..139208199, -
9.37e-99FFCP PHASE2:Hg19::chr1:193232096..193232117,+#_c07c2b762403a71a84dd7174e0436d24p@chr1:193232096..193232117, +
9.37e-99FFCP PHASE2:Hg19::chr12:70464675..70464680,+#_c07c2b762403a71a84dd7174e0436d24p@chr12:70464675..70464680, +
9.37e-99FFCP PHASE1:Hg19::chr4:139208173..139208199,-#_c07c2b762403a71a84dd7174e0436d24p@chr4:139208173..139208199, -
9.37e-99FFCP PHASE1:Hg19::chr18:7955271..7955280,+#_c07c2b762403a71a84dd7174e0436d24p@chr18:7955271..7955280, +
9.37e-99FFCP PHASE2:Hg19::chr18:7955271..7955280,+#_c07c2b762403a71a84dd7174e0436d24p@chr18:7955271..7955280, +
9.37e-99FFCP PHASE2:Hg19::chr4:173014804..173014812,+#_c07c2b762403a71a84dd7174e0436d24p@chr4:173014804..173014812, +
9.37e-99FFCP PHASE2:Hg19::chr6:154858221..154858224,-#_c07c2b762403a71a84dd7174e0436d24p@chr6:154858221..154858224, -
9.37e-99FFCP PHASE2:Hg19::chr9:77257424..77257435,-#_c07c2b762403a71a84dd7174e0436d24p@chr9:77257424..77257435, -
9.37e-99FFCP PHASE1:Hg19::chr1:193232096..193232117,+#_c07c2b762403a71a84dd7174e0436d24p@chr1:193232096..193232117, +
9.37e-99FFCP PHASE2:Hg19::chr6:161970049..161970057,-#_c07c2b762403a71a84dd7174e0436d24p3@GU361471
9.37e-99FFCP PHASE2:Hg19::chr12:70464593..70464598,+#_c07c2b762403a71a84dd7174e0436d24p@chr12:70464593..70464598, +
9.37e-99FFCP PHASE1:Hg19::chr6:154858221..154858224,-#_c07c2b762403a71a84dd7174e0436d24p@chr6:154858221..154858224, -
9.37e-99FFCP PHASE1:Hg19::chr4:173014804..173014812,+#_c07c2b762403a71a84dd7174e0436d24p@chr4:173014804..173014812, +
9.37e-99FFCP PHASE2:Hg19::chr6:154858237..154858245,-#_c07c2b762403a71a84dd7174e0436d24p@chr6:154858237..154858245, -
2.55e-98FFCP PHASE2:Hg19::chr6:154858334..154858342,-#_971806b9d3e4e4540c43782fcad14be8p@chr6:154858334..154858342, -
2.55e-98FFCP PHASE2:Hg19::chr13:93508642..93508652,-#_971806b9d3e4e4540c43782fcad14be8p@chr13:93508642..93508652, -
2.55e-98FFCP PHASE2:Hg19::chr6:132980338..132980346,-#_971806b9d3e4e4540c43782fcad14be8p@chr6:132980338..132980346, -
2.55e-98FFCP PHASE1:Hg19::chr6:154858334..154858342,-#_971806b9d3e4e4540c43782fcad14be8p@chr6:154858334..154858342, -
2.55e-98FFCP PHASE2:Hg19::chr1:110661599..110661609,-#_971806b9d3e4e4540c43782fcad14be8p@chr1:110661599..110661609, -
2.55e-98FFCP PHASE1:Hg19::chr6:132980338..132980346,-#_971806b9d3e4e4540c43782fcad14be8p@chr6:132980338..132980346, -
2.55e-98FFCP PHASE1:Hg19::chr1:110661599..110661609,-#_971806b9d3e4e4540c43782fcad14be8p@chr1:110661599..110661609, -
2.55e-98FFCP PHASE1:Hg19::chr18:56816249..56816258,+#_971806b9d3e4e4540c43782fcad14be8p@chr18:56816249..56816258, +
2.55e-98FFCP PHASE2:Hg19::chr18:56816249..56816258,+#_971806b9d3e4e4540c43782fcad14be8p@chr18:56816249..56816258, +
2.55e-98FFCP PHASE1:Hg19::chr13:93508642..93508652,-#_971806b9d3e4e4540c43782fcad14be8p@chr13:93508642..93508652, -
1.23e-66FFCP PHASE1:Hg19::chr18:7955176..7955183,+#_9923fdc9693bb28cfd976c3a064f3322p@chr18:7955176..7955183, +
1.23e-66FFCP PHASE2:Hg19::chr18:7955176..7955183,+#_9923fdc9693bb28cfd976c3a064f3322p@chr18:7955176..7955183, +
1.23e-66FFCP PHASE2:Hg19::chr1:110678228..110678236,+#_9923fdc9693bb28cfd976c3a064f3322p@chr1:110678228..110678236, +
1.23e-66FFCP PHASE2:Hg19::chr12:70464652..70464662,+#_9923fdc9693bb28cfd976c3a064f3322p@chr12:70464652..70464662, +
1.23e-66FFCP PHASE1:Hg19::chr1:110678228..110678236,+#_9923fdc9693bb28cfd976c3a064f3322p@chr1:110678228..110678236, +
1.23e-66FFCP PHASE1:Hg19::chr12:128108552..128108561,+#_9923fdc9693bb28cfd976c3a064f3322p1@ENST00000537470
1.23e-66FFCP PHASE2:Hg19::chr19:7570269..7570273,+#_9923fdc9693bb28cfd976c3a064f3322p13@C19orf45
1.23e-66FFCP PHASE2:Hg19::chr9:77257683..77257703,+#_9923fdc9693bb28cfd976c3a064f3322p@chr9:77257683..77257703, +
1.23e-66FFCP PHASE1:Hg19::chr12:127385138..127385144,-#_9923fdc9693bb28cfd976c3a064f3322p@chr12:127385138..127385144, -
1.23e-66FFCP PHASE1:Hg19::chr19:7570269..7570273,+#_9923fdc9693bb28cfd976c3a064f3322p13@C19orf45
1.23e-66FFCP PHASE1:Hg19::chr12:70464652..70464662,+#_9923fdc9693bb28cfd976c3a064f3322p@chr12:70464652..70464662, +
1.23e-66FFCP PHASE2:Hg19::chr1:110678110..110678115,+#_9923fdc9693bb28cfd976c3a064f3322p@chr1:110678110..110678115, +
1.23e-66FFCP PHASE1:Hg19::chr9:77257683..77257703,+#_9923fdc9693bb28cfd976c3a064f3322p@chr9:77257683..77257703, +
1.23e-66FFCP PHASE1:Hg19::chr18:56815158..56815162,+#_9923fdc9693bb28cfd976c3a064f3322p@chr18:56815158..56815162, +
1.23e-66FFCP PHASE2:Hg19::chr18:56815158..56815162,+#_9923fdc9693bb28cfd976c3a064f3322p@chr18:56815158..56815162, +
1.23e-66FFCP PHASE2:Hg19::chr12:128108552..128108561,+#_9923fdc9693bb28cfd976c3a064f3322p1@ENST00000537470
1.23e-66FFCP PHASE1:Hg19::chr1:110678110..110678115,+#_9923fdc9693bb28cfd976c3a064f3322p@chr1:110678110..110678115, +
1.23e-66FFCP PHASE2:Hg19::chr12:127385138..127385144,-#_9923fdc9693bb28cfd976c3a064f3322p@chr12:127385138..127385144, -
2.39e-66FFCP PHASE2:Hg19::chr2:159855059..159855068,-#_e114b7254c18eaeec7c52830af89c9dfp@chr2:159855059..159855068, -
2.39e-66FFCP PHASE2:Hg19::chr4:3310694..3310716,-#_e114b7254c18eaeec7c52830af89c9dfp@chr4:3310694..3310716, -
2.39e-66FFCP PHASE2:Hg19::chr5:77683792..77683799,+#_e114b7254c18eaeec7c52830af89c9dfp@chr5:77683792..77683799, +
2.39e-66FFCP PHASE1:Hg19::chr12:128077388..128077416,+#_e114b7254c18eaeec7c52830af89c9dfp@chr12:128077388..128077416, +
2.39e-66FFCP PHASE2:Hg19::chr5:104246731..104246738,-#_e114b7254c18eaeec7c52830af89c9dfp3@ENST00000524336
2.39e-66FFCP PHASE1:Hg19::chr2:159855059..159855068,-#_e114b7254c18eaeec7c52830af89c9dfp@chr2:159855059..159855068, -
2.39e-66FFCP PHASE2:Hg19::chr1:165198157..165198181,-#_e114b7254c18eaeec7c52830af89c9dfp@chr1:165198157..165198181, -
2.39e-66FFCP PHASE1:Hg19::chr4:3310694..3310716,-#_e114b7254c18eaeec7c52830af89c9dfp@chr4:3310694..3310716, -
2.39e-66FFCP PHASE1:Hg19::chr5:77683792..77683799,+#_e114b7254c18eaeec7c52830af89c9dfp@chr5:77683792..77683799, +
2.39e-66FFCP PHASE2:Hg19::chr7:120381641..120381650,+#_e114b7254c18eaeec7c52830af89c9dfp@chr7:120381641..120381650, +
2.39e-66FFCP PHASE1:Hg19::chr5:104246731..104246738,-#_e114b7254c18eaeec7c52830af89c9dfp3@ENST00000524336
2.39e-66FFCP PHASE2:Hg19::chr13:93587956..93587973,+#_e114b7254c18eaeec7c52830af89c9dfp@chr13:93587956..93587973, +
2.39e-66FFCP PHASE2:Hg19::chr15:92459318..92459327,+#_e114b7254c18eaeec7c52830af89c9dfp@chr15:92459318..92459327, +
2.39e-66FFCP PHASE1:Hg19::chr1:165198157..165198181,-#_e114b7254c18eaeec7c52830af89c9dfp@chr1:165198157..165198181, -
2.39e-66FFCP PHASE2:Hg19::chr12:128077388..128077416,+#_e114b7254c18eaeec7c52830af89c9dfp@chr12:128077388..128077416, +
2.39e-66FFCP PHASE1:Hg19::chr7:120381641..120381650,+#_e114b7254c18eaeec7c52830af89c9dfp@chr7:120381641..120381650, +
2.39e-66FFCP PHASE1:Hg19::chr15:92459318..92459327,+#_e114b7254c18eaeec7c52830af89c9dfp@chr15:92459318..92459327, +
2.39e-66FFCP PHASE1:Hg19::chr18:56816267..56816276,+#_e114b7254c18eaeec7c52830af89c9dfp@chr18:56816267..56816276, +
2.39e-66FFCP PHASE2:Hg19::chr18:56816267..56816276,+#_e114b7254c18eaeec7c52830af89c9dfp@chr18:56816267..56816276, +
2.39e-66FFCP PHASE1:Hg19::chr13:93587956..93587973,+#_e114b7254c18eaeec7c52830af89c9dfp@chr13:93587956..93587973, +
4.66e-66FFCP PHASE2:Hg19::chr7:120778453..120778458,-#_d2e3e0fcc26c294a706dbe0c05a0b5e8p@chr7:120778453..120778458, -
4.66e-66FFCP PHASE2:Hg19::chr7:100808087..100808104,-#_d2e3e0fcc26c294a706dbe0c05a0b5e8p@chr7:100808087..100808104, -
4.66e-66FFCP PHASE1:Hg19::chr7:120778453..120778458,-#_d2e3e0fcc26c294a706dbe0c05a0b5e8p@chr7:120778453..120778458, -
4.66e-66FFCP PHASE1:Hg19::chr7:100808087..100808104,-#_d2e3e0fcc26c294a706dbe0c05a0b5e8p@chr7:100808087..100808104, -
4.66e-66FFCP PHASE1:Hg19::chr14:101165430..101165451,-#_d2e3e0fcc26c294a706dbe0c05a0b5e8p@chr14:101165430..101165451, -
4.66e-66FFCP PHASE2:Hg19::chr19:51412411..51412426,-#_d2e3e0fcc26c294a706dbe0c05a0b5e8p4@KLK4

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