Personal tools

CL:0002623: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
{{CL
{{CL
|id=CL:0002623
|alt_id=
|name=acinar cell of salivary gland
|namespace=cell
|def="An acinar cell of salivary gland." [GOC:tfm]
|xref=
|is_a=CL:0000622;;CL:0002251
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=tmeehan
|created_by=tmeehan
|obo_creation_date=2011-03-14T02:22:22Z
|def="An acinar cell of salivary gland." [GOC:tfm]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0002623
|is_a=CL:0000622 ;;CL:1001596
|is_obsolete=
|located_in=
|located_in=
|name=acinar cell of salivary gland
|namespace=FANTOM
|obo_creation_date=2011-03-14T02:22:22Z
|part_of=UBERON:0001044
|part_of=UBERON:0001044
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=
}}
}}

Latest revision as of 16:46, 12 September 2014

Name:acinar cell of salivary gland
Namespace:FANTOM
Definition:"An acinar cell of salivary gland." [GOC:tfm]
Created by:tmeehan
Creation date:2011-03-14T02:22:22Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000622(acinar cell),CL:1001596(salivary gland glandular cell)
part_of:UBERON:0001044(saliva-secreting gland)



Children


derives from:FF:0000278 (human salivary acinar cell sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002623 (acinar cell of salivary gland), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
2.79e-195FFCP PHASE2:Hg19::chr5:66942627..66942643,-#_3aad374efa0f05a964d0c69173b8c2cdp1@ENST00000507298
2.79e-195FFCP PHASE1:Hg19::chr6:25004699..25004706,-#_3aad374efa0f05a964d0c69173b8c2cdp@chr6:25004699..25004706, -
2.79e-195FFCP PHASE2:Hg19::chr6:25004699..25004706,-#_3aad374efa0f05a964d0c69173b8c2cdp@chr6:25004699..25004706, -
2.79e-195FFCP PHASE1:Hg19::chr5:66942627..66942643,-#_3aad374efa0f05a964d0c69173b8c2cdp1@ENST00000507298
3.27e-147FFCP PHASE1:Hg19::chr6:25004888..25004899,-#_14054775a8dbce79f51bf79a24048a29p@chr6:25004888..25004899, -
3.27e-147FFCP PHASE2:Hg19::chr6:25004888..25004899,-#_14054775a8dbce79f51bf79a24048a29p@chr6:25004888..25004899, -
3.27e-147FFCP PHASE1:Hg19::chr6:25004760..25004769,-#_14054775a8dbce79f51bf79a24048a29p@chr6:25004760..25004769, -
3.27e-147FFCP PHASE2:Hg19::chr6:25004760..25004769,-#_14054775a8dbce79f51bf79a24048a29p@chr6:25004760..25004769, -
1.47e-146FFCP PHASE1:Hg19::chr12:966094..966103,+#_f26603bd0e0ef2bd97919311f816b80bp@chr12:966094..966103, +
1.47e-146FFCP PHASE2:Hg19::chr12:966094..966103,+#_f26603bd0e0ef2bd97919311f816b80bp@chr12:966094..966103, +
8.98e-131FFCP PHASE1:Hg19::chr3:48471830..48471839,-#_415ee18564160b6fa3376ea6ec92ec64p27@PLXNB1
8.98e-131FFCP PHASE2:Hg19::chr3:48471830..48471839,-#_415ee18564160b6fa3376ea6ec92ec64p27@PLXNB1
2.33e-118FFCP PHASE1:Hg19::chr6:25004791..25004799,-#_a694910b372187665af60faec3c9cf7ep@chr6:25004791..25004799, -
2.33e-118FFCP PHASE2:Hg19::chr6:25004791..25004799,-#_a694910b372187665af60faec3c9cf7ep@chr6:25004791..25004799, -
4.06e-99FFCP PHASE1:Hg19::chr6:25004678..25004688,-#_f7d5b426e9dca213fdd1c4683294c0a9p@chr6:25004678..25004688, -
4.06e-99FFCP PHASE2:Hg19::chr6:25004678..25004688,-#_f7d5b426e9dca213fdd1c4683294c0a9p@chr6:25004678..25004688, -
1.11e-98FFCP PHASE1:Hg19::chr12:52912957..52912973,-#_652cc8d4b7af5d09a3bc3ba80c13a6b9p17@KRT5
1.11e-98FFCP PHASE2:Hg19::chr12:52912957..52912973,-#_652cc8d4b7af5d09a3bc3ba80c13a6b9p17@KRT5
6.24e-88FFCP PHASE1:Hg19::chr7:7604061..7604072,-#_9bb63bab938ca93138e2fb5329827cd7p@chr7:7604061..7604072, -
6.24e-88FFCP PHASE2:Hg19::chr7:7604061..7604072,-#_9bb63bab938ca93138e2fb5329827cd7p@chr7:7604061..7604072, -
3.04e-85FFCP PHASE2:Hg19::chr6:56488575..56488587,-#_4a4984ed2a3499e996668acde182cd25p@chr6:56488575..56488587, -
3.04e-85FFCP PHASE1:Hg19::chr6:56488575..56488587,-#_4a4984ed2a3499e996668acde182cd25p@chr6:56488575..56488587, -
3.04e-85FFCP PHASE1:Hg19::chr20:3295706..3295717,-#_4a4984ed2a3499e996668acde182cd25p@chr20:3295706..3295717, -
3.04e-85FFCP PHASE2:Hg19::chr20:3295706..3295717,-#_4a4984ed2a3499e996668acde182cd25p@chr20:3295706..3295717, -
7.51e-74FFCP PHASE2:Hg19::chr2:19428508..19428522,-#_44c1cd31296ebb99ef0eb97dad0fda3fp@chr2:19428508..19428522, -
7.51e-74FFCP PHASE1:Hg19::chr2:19428508..19428522,-#_44c1cd31296ebb99ef0eb97dad0fda3fp@chr2:19428508..19428522, -
5.01e-67FFCP PHASE1:Hg19::chr6:25004775..25004790,-#_20543f6148a05a795932bee184c9b05ep@chr6:25004775..25004790, -
5.01e-67FFCP PHASE2:Hg19::chr6:25004775..25004790,-#_20543f6148a05a795932bee184c9b05ep@chr6:25004775..25004790, -
5.01e-67FFCP PHASE2:Hg19::chr13:43059605..43059611,+#_20543f6148a05a795932bee184c9b05ep@chr13:43059605..43059611, +
5.01e-67FFCP PHASE1:Hg19::chr13:43059605..43059611,+#_20543f6148a05a795932bee184c9b05ep@chr13:43059605..43059611, +
9.82e-67FFCP PHASE2:Hg19::chr12:3600112..3600125,+#_dba60755e37fa997a084aab958b2cf15p6@PRMT8
9.82e-67FFCP PHASE1:Hg19::chr12:3600112..3600125,+#_dba60755e37fa997a084aab958b2cf15p6@PRMT8
1.92e-66FFCP PHASE1:Hg19::chr15:95334390..95334402,-#_fa7117eaf9eeb583db2b57492aaf4c1bp@chr15:95334390..95334402, -
1.92e-66FFCP PHASE2:Hg19::chr15:95334390..95334402,-#_fa7117eaf9eeb583db2b57492aaf4c1bp@chr15:95334390..95334402, -
2.39e-66FFCP PHASE1:Hg19::chr11:86285462..86285463,-#_41475d20f613af371f44a3e75ce483c4p@chr11:86285462..86285463, -
2.39e-66FFCP PHASE1:Hg19::chr17:38977367..38977371,-#_41475d20f613af371f44a3e75ce483c4p@chr17:38977367..38977371, -
2.39e-66FFCP PHASE1:Hg19::chr17:38975839..38975846,-#_41475d20f613af371f44a3e75ce483c4p14@KRT10
2.39e-66FFCP PHASE2:Hg19::chr17:38977367..38977371,-#_41475d20f613af371f44a3e75ce483c4p@chr17:38977367..38977371, -
2.39e-66FFCP PHASE2:Hg19::chr11:86285462..86285463,-#_41475d20f613af371f44a3e75ce483c4p@chr11:86285462..86285463, -
2.39e-66FFCP PHASE2:Hg19::chr17:38975839..38975846,-#_41475d20f613af371f44a3e75ce483c4p14@KRT10
2.39e-66FFCP PHASE1:Hg19::chr17:38978288..38978293,-#_41475d20f613af371f44a3e75ce483c4p21@KRT10
2.39e-66FFCP PHASE1:Hg19::chr20:3295742..3295749,-#_41475d20f613af371f44a3e75ce483c4p@chr20:3295742..3295749, -
2.39e-66FFCP PHASE2:Hg19::chr20:3295742..3295749,-#_41475d20f613af371f44a3e75ce483c4p@chr20:3295742..3295749, -
2.39e-66FFCP PHASE2:Hg19::chr17:38978288..38978293,-#_41475d20f613af371f44a3e75ce483c4p21@KRT10
3.35e-66FFCP PHASE1:Hg19::chr3:140961094..140961103,+#_0dd121a40d00abf0362b82a51bac14e2p@chr3:140961094..140961103, +
3.35e-66FFCP PHASE1:Hg19::chr17:38976882..38976895,-#_0dd121a40d00abf0362b82a51bac14e2p@chr17:38976882..38976895, -
3.35e-66FFCP PHASE2:Hg19::chr3:140961094..140961103,+#_0dd121a40d00abf0362b82a51bac14e2p@chr3:140961094..140961103, +
3.35e-66FFCP PHASE2:Hg19::chr17:38976882..38976895,-#_0dd121a40d00abf0362b82a51bac14e2p@chr17:38976882..38976895, -
2.24e-65FFCP PHASE2:Hg19::chr17:38984452..38984467,+#_fb921de8745ec4669ea8f886a984ea11p@chr17:38984452..38984467, +
2.24e-65FFCP PHASE1:Hg19::chr17:38984452..38984467,+#_fb921de8745ec4669ea8f886a984ea11p@chr17:38984452..38984467, +
2.98e-60FFCP PHASE2:Hg19::chr1:197657822..197657832,+#_5c93e0f395641d2f7c707327b59a5bd7p1@EEF1A1P32
2.98e-60FFCP PHASE1:Hg19::chr1:197657822..197657832,+#_5c93e0f395641d2f7c707327b59a5bd7p1@EEF1A1P32
6.68e-60FFCP PHASE1:Hg19::chr17:38978586..38978620,-#_504be1265b2bdfc7fc9c0882bb1a3d45p5@KRT10
6.68e-60FFCP PHASE2:Hg19::chr17:38978586..38978620,-#_504be1265b2bdfc7fc9c0882bb1a3d45p5@KRT10
5.01e-55FFCP PHASE1:Hg19::chr17:995196..995215,-#_ee9b2beafcafca7a6b067c71d029321dp22@ABR
5.01e-55FFCP PHASE2:Hg19::chr17:995196..995215,-#_ee9b2beafcafca7a6b067c71d029321dp22@ABR
1.04e-54FFCP PHASE1:Hg19::chr17:38978257..38978272,-#_66674e0c4ae173fd63f85dabbad3cf1bp6@KRT10
1.04e-54FFCP PHASE2:Hg19::chr17:38978257..38978272,-#_66674e0c4ae173fd63f85dabbad3cf1bp6@KRT10
1.25e-54FFCP PHASE1:Hg19::chr17:38976838..38976861,-#_5b6ef9715d7e264c632a26df2e5126a9p@chr17:38976838..38976861, -
1.25e-54FFCP PHASE2:Hg19::chr17:38976838..38976861,-#_5b6ef9715d7e264c632a26df2e5126a9p@chr17:38976838..38976861, -
4.51e-54FFCP PHASE2:Hg19::chr10:118187463..118187478,+#_ebaf8c271f65aa629ea97e422dfdd5bfp4@PNLIPRP3
4.51e-54FFCP PHASE1:Hg19::chr10:118187463..118187478,+#_ebaf8c271f65aa629ea97e422dfdd5bfp4@PNLIPRP3
2.19e-53FFCP PHASE1:Hg19::chr17:38978718..38978740,-#_8f37a9f9d29cee467616332c016d337ep1@AB590331
2.19e-53FFCP PHASE2:Hg19::chr17:38978718..38978740,-#_8f37a9f9d29cee467616332c016d337ep1@AB590331
9.6e-51FFCP PHASE2:Hg19::chr6:56504814..56504835,-#_f2b0f008e3d313ddde9e3fb27510398cp@chr6:56504814..56504835, -
9.6e-51FFCP PHASE1:Hg19::chr6:56504814..56504835,-#_f2b0f008e3d313ddde9e3fb27510398cp@chr6:56504814..56504835, -
2.23e-50FFCP PHASE2:Hg19::chr10:105830210..105830215,-#_4534bb4e0a27dd4f9a2cbb223a3f106fp@chr10:105830210..105830215, -
2.23e-50FFCP PHASE1:Hg19::chr10:105830210..105830215,-#_4534bb4e0a27dd4f9a2cbb223a3f106fp@chr10:105830210..105830215, -
2.23e-50FFCP PHASE2:Hg19::chr10:134756449..134756462,+#_4534bb4e0a27dd4f9a2cbb223a3f106fp@chr10:134756449..134756462, +
2.23e-50FFCP PHASE1:Hg19::chr10:134756449..134756462,+#_4534bb4e0a27dd4f9a2cbb223a3f106fp@chr10:134756449..134756462, +
2.64e-50FFCP PHASE2:Hg19::chr9:87879610..87879618,+#_aa45ad4dfd0a958c05cf31da8ebef2c2p@chr9:87879610..87879618, +
2.64e-50FFCP PHASE1:Hg19::chr9:87879610..87879618,+#_aa45ad4dfd0a958c05cf31da8ebef2c2p@chr9:87879610..87879618, +
1.01e-49FFCP PHASE2:Hg19::chr14:77668435..77668443,+#_3bc3739f0e0a48a06f523a59edce2b03p@chr14:77668435..77668443, +
1.01e-49FFCP PHASE1:Hg19::chr14:77668435..77668443,+#_3bc3739f0e0a48a06f523a59edce2b03p@chr14:77668435..77668443, +
4.05e-47FFCP PHASE1:Hg19::chr20:42647752..42647774,-#_5d6c3778ceeec5409acd4073cacaaea5p@chr20:42647752..42647774, -
4.05e-47FFCP PHASE2:Hg19::chr20:42647752..42647774,-#_5d6c3778ceeec5409acd4073cacaaea5p@chr20:42647752..42647774, -
5.53e-47FFCP PHASE1:Hg19::chr3:72387462..72387488,-#_9206393b809f64462b87346f8dfeb2a0p@chr3:72387462..72387488, -
5.53e-47FFCP PHASE2:Hg19::chr3:72387462..72387488,-#_9206393b809f64462b87346f8dfeb2a0p@chr3:72387462..72387488, -
8.84e-47FFCP PHASE1:Hg19::chr12:960614..960626,+#_ce79a00fed917bd60d5bf7c7c557e7f1p32@WNK1
8.84e-47FFCP PHASE2:Hg19::chr12:960614..960626,+#_ce79a00fed917bd60d5bf7c7c557e7f1p32@WNK1
1.21e-46FFCP PHASE2:Hg19::chr17:38261177..38261211,-#_b0cbb37bd0baac98372ca540836bc9b1p@chr17:38261177..38261211, -
1.21e-46FFCP PHASE2:Hg19::chr6:56480719..56480734,-#_b0cbb37bd0baac98372ca540836bc9b1p@chr6:56480719..56480734, -
1.21e-46FFCP PHASE1:Hg19::chr6:56480719..56480734,-#_b0cbb37bd0baac98372ca540836bc9b1p@chr6:56480719..56480734, -
1.21e-46FFCP PHASE1:Hg19::chr17:995135..995149,-#_b0cbb37bd0baac98372ca540836bc9b1p25@ABR
1.21e-46FFCP PHASE2:Hg19::chr17:995135..995149,-#_b0cbb37bd0baac98372ca540836bc9b1p25@ABR
1.21e-46FFCP PHASE1:Hg19::chr17:38261177..38261211,-#_b0cbb37bd0baac98372ca540836bc9b1p@chr17:38261177..38261211, -
1.65e-46FFCP PHASE1:Hg19::chr1:3607228..3607250,+#_b7c2eef8ec91aece8145a4fa398eaa1ep8@TP73
1.65e-46FFCP PHASE2:Hg19::chr1:3607228..3607250,+#_b7c2eef8ec91aece8145a4fa398eaa1ep8@TP73
1.65e-46FFCP PHASE2:Hg19::chr9:96698887..96698909,+#_b7c2eef8ec91aece8145a4fa398eaa1ep@chr9:96698887..96698909, +
1.65e-46FFCP PHASE1:Hg19::chr9:96698887..96698909,+#_b7c2eef8ec91aece8145a4fa398eaa1ep@chr9:96698887..96698909, +
1.92e-46FFCP PHASE2:Hg19::chr6:56483497..56483514,-#_9041d95fcacf90cff8e2ce95644c16aep84@DST
1.92e-46FFCP PHASE1:Hg19::chr6:56483497..56483514,-#_9041d95fcacf90cff8e2ce95644c16aep84@DST
2.62e-46FFCP PHASE2:Hg19::chr21:45943378..45943388,+#_100044bee25edd655603d837190687c6p@chr21:45943378..45943388, +
2.62e-46FFCP PHASE1:Hg19::chr21:45943378..45943388,+#_100044bee25edd655603d837190687c6p@chr21:45943378..45943388, +
5.0e-45FFCP PHASE2:Hg19::chr5:110104185..110104192,-#_03cc1b15106c6c3d1303f96eab1be93ap@chr5:110104185..110104192, -
5.0e-45FFCP PHASE1:Hg19::chr5:110104185..110104192,-#_03cc1b15106c6c3d1303f96eab1be93ap@chr5:110104185..110104192, -
6.25e-45FFCP PHASE2:Hg19::chr4:159236462..159236471,+#_e3332e5a4665a6b10024a0cdbbd65730p10@RXFP1
6.25e-45FFCP PHASE1:Hg19::chr4:159236462..159236471,+#_e3332e5a4665a6b10024a0cdbbd65730p10@RXFP1
7.81e-45FFCP PHASE1:Hg19::chrX:64992891..64992912,+#_870275f7a53be84c86d482397fa6d55bp@chrX:64992891..64992912, +
7.81e-45FFCP PHASE2:Hg19::chrX:64992891..64992912,+#_870275f7a53be84c86d482397fa6d55bp@chrX:64992891..64992912, +

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=CL:0002623&oldid=3275564"