Personal tools

UBERON:0004573: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{UBERON
{{UBERON
|id=UBERON:0004573
|alt_id=
|name=systemic artery
|anatomical_img_id=FMA:66464
|namespace=
|def="Systemic arteries are the arteries of the systemic circulation, which is the part of the cardiovascular system which carries oxygenated blood away from the heart, to the body, and returns deoxygenated blood back to the heart." [Wikipedia:Artery#Systemic_arteries]
|xref=FMA:66464
|is_a=UBERON:0001637
|synonym="systemic arterial subtree" EXACT [FMA:66464]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="Systemic arteries are the arteries of the systemic circulation, which is the part of the cardiovascular system which carries oxygenated blood away from the heart, to the body, and returns deoxygenated blood back to the heart." [Wikipedia:Artery#Systemic_arteries]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0004573
|is_a=UBERON:0001637
|is_obsolete=
|located_in=
|located_in=
|name=systemic artery
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0004571
|part_of=UBERON:0004571
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="systemic arterial subtree" EXACT [FMA:66464]
|union_of=
|xref=FMA:66464
}}
}}

Latest revision as of 17:46, 12 September 2014

Name:systemic artery
Namespace:FANTOM
Definition:"Systemic arteries are the arteries of the systemic circulation, which is the part of the cardiovascular system which carries oxygenated blood away from the heart, to the body, and returns deoxygenated blood back to the heart." [Wikipedia:Artery#Systemic_arteries]
Xrefs:
links:
FMA:66464
Synonyms: "systemic arterial subtree" EXACT [FMA:66464]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0001637(artery)
part_of:UBERON:0004571(systemic arterial system)



Children

is a:UBERON:0001529 (brachiocephalic artery),UBERON:0001533 (subclavian artery),UBERON:0001621 (coronary artery),UBERON:0002456 (internal thoracic artery),UBERON:0005396 (carotid artery segment)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004573 (systemic artery), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.46e-86FFCP PHASE2:Mm9::chr8:69221163..69221172,+#_3383e9ae00d1f4c13785bf18adb9d4ddp6@Npy1r
1.46e-86FFCP PHASE1:Mm9::chr8:69221163..69221172,+#_3383e9ae00d1f4c13785bf18adb9d4ddp6@Npy1r
2.32e-83FFCP PHASE2:Hg19::chr6:53359400..53359406,+#_1d7e798fdcd45d0e214d2bcd22ede7b9p@chr6:53359400..53359406, +
2.32e-83FFCP PHASE1:Hg19::chr6:53359400..53359406,+#_1d7e798fdcd45d0e214d2bcd22ede7b9p@chr6:53359400..53359406, +
7.36e-70FFCP PHASE2:Mm9::chr8:69221150..69221161,+#_8dedc91c44743a344301215bf69a8aa6p5@Npy1r
7.36e-70FFCP PHASE1:Mm9::chr8:69221150..69221161,+#_8dedc91c44743a344301215bf69a8aa6p5@Npy1r
2.47e-69FFCP PHASE1:Mm9::chr2:65009852..65009866,-#_ad38d04f4d39e1ba5ab5aeae967dbef1p@chr2:65009852..65009866, -
2.47e-69FFCP PHASE2:Mm9::chr2:65009852..65009866,-#_ad38d04f4d39e1ba5ab5aeae967dbef1p@chr2:65009852..65009866, -
3.45e-66FFCP PHASE1:Hg19::chr4:54931911..54931926,-#_4bd369658463bff6c624d1fc84651959p@chr4:54931911..54931926, -
3.45e-66FFCP PHASE2:Hg19::chr4:54931911..54931926,-#_4bd369658463bff6c624d1fc84651959p@chr4:54931911..54931926, -
2.83e-65FFCP PHASE1:Mm9::chrX:160839744..160839754,+#_22baebfadd064119744ea3858e1f411fp@chrX:160839744..160839754, +
2.83e-65FFCP PHASE2:Mm9::chr2:112043522..112043530,-#_22baebfadd064119744ea3858e1f411fp@chr2:112043522..112043530, -
2.83e-65FFCP PHASE1:Mm9::chr2:112043522..112043530,-#_22baebfadd064119744ea3858e1f411fp@chr2:112043522..112043530, -
2.83e-65FFCP PHASE2:Mm9::chr17:87574327..87574332,+#_22baebfadd064119744ea3858e1f411fp@chr17:87574327..87574332, +
2.83e-65FFCP PHASE1:Mm9::chr2:178190171..178190178,+#_22baebfadd064119744ea3858e1f411fp@chr2:178190171..178190178, +
2.83e-65FFCP PHASE2:Mm9::chr17:14827154..14827169,-#_22baebfadd064119744ea3858e1f411fp@chr17:14827154..14827169, -
2.83e-65FFCP PHASE1:Mm9::chr17:14827154..14827169,-#_22baebfadd064119744ea3858e1f411fp@chr17:14827154..14827169, -
2.83e-65FFCP PHASE2:Mm9::chr17:14802633..14802637,-#_22baebfadd064119744ea3858e1f411fp@chr17:14802633..14802637, -
2.83e-65FFCP PHASE2:Mm9::chr8:69228447..69228492,+#_22baebfadd064119744ea3858e1f411fp@chr8:69228447..69228492, +
2.83e-65FFCP PHASE1:Mm9::chr11:50416871..50416882,+#_22baebfadd064119744ea3858e1f411fp5@Adamts2
2.83e-65FFCP PHASE1:Mm9::chr17:14802633..14802637,-#_22baebfadd064119744ea3858e1f411fp@chr17:14802633..14802637, -
2.83e-65FFCP PHASE2:Mm9::chr11:50416871..50416882,+#_22baebfadd064119744ea3858e1f411fp5@Adamts2
2.83e-65FFCP PHASE2:Mm9::chr2:178190171..178190178,+#_22baebfadd064119744ea3858e1f411fp@chr2:178190171..178190178, +
2.83e-65FFCP PHASE1:Mm9::chr8:69228447..69228492,+#_22baebfadd064119744ea3858e1f411fp@chr8:69228447..69228492, +
2.83e-65FFCP PHASE2:Mm9::chrX:160839744..160839754,+#_22baebfadd064119744ea3858e1f411fp@chrX:160839744..160839754, +
2.83e-65FFCP PHASE1:Mm9::chr17:87574327..87574332,+#_22baebfadd064119744ea3858e1f411fp@chr17:87574327..87574332, +
3.79e-61FFCP PHASE2:Hg19::chr12:96830430..96830450,+#_e3b36c3a1863dc2e8c69492a3bf22eb0p@chr12:96830430..96830450, +
3.79e-61FFCP PHASE1:Hg19::chr12:96830430..96830450,+#_e3b36c3a1863dc2e8c69492a3bf22eb0p@chr12:96830430..96830450, +
1.02e-60FFCP PHASE2:Hg19::chr11:102668200..102668228,-#_198c2e0d59789749ad03b5785b2aedaep4@MMP1
1.02e-60FFCP PHASE1:Hg19::chr11:102668200..102668228,-#_198c2e0d59789749ad03b5785b2aedaep4@MMP1
1.24e-59FFCP PHASE1:Hg19::chr11:102668178..102668206,+#_3122bc9a76c5c0b22a0fb2edaa48c18ap@chr11:102668178..102668206, +
1.24e-59FFCP PHASE2:Hg19::chr11:102668178..102668206,+#_3122bc9a76c5c0b22a0fb2edaa48c18ap@chr11:102668178..102668206, +
2.92e-59FFCP PHASE2:Hg19::chr4:7846444..7846449,-#_986e03da7af6e5b0ae10c391dc0622cdp@chr4:7846444..7846449, -
2.92e-59FFCP PHASE1:Hg19::chr4:7846444..7846449,-#_986e03da7af6e5b0ae10c391dc0622cdp@chr4:7846444..7846449, -
1.7e-58FFCP PHASE1:Hg19::chr8:55370720..55370733,+#_e46a9d7054f67201fb478efd73a16aaap2@SOX17
1.7e-58FFCP PHASE2:Hg19::chr8:55370720..55370733,+#_e46a9d7054f67201fb478efd73a16aaap2@SOX17
2.75e-58FFCP PHASE1:Hg19::chr11:102661517..102661541,-#_e247d5acf47714f01f2ccb925d4df72dp@chr11:102661517..102661541, -
2.75e-58FFCP PHASE2:Hg19::chr11:102661517..102661541,-#_e247d5acf47714f01f2ccb925d4df72dp@chr11:102661517..102661541, -
5.83e-58FFCP PHASE2:Hg19::chr3:106484411..106484418,+#_29cdb4dd178ea11f4234efda27683897p@chr3:106484411..106484418, +
5.83e-58FFCP PHASE1:Hg19::chr3:106484411..106484418,+#_29cdb4dd178ea11f4234efda27683897p@chr3:106484411..106484418, +
7.95e-58FFCP PHASE2:Hg19::chr11:102662162..102662217,-#_21acd8c9777528fb34d67478b3cb5cafp@chr11:102662162..102662217, -
7.95e-58FFCP PHASE1:Hg19::chr11:102662162..102662217,-#_21acd8c9777528fb34d67478b3cb5cafp@chr11:102662162..102662217, -
6.81e-57FFCP PHASE2:Hg19::chr4:54931877..54931892,-#_77b775306a3366155b2198719b010985p@chr4:54931877..54931892, -
6.81e-57FFCP PHASE1:Hg19::chr4:54931877..54931892,-#_77b775306a3366155b2198719b010985p@chr4:54931877..54931892, -
9.57e-57FFCP PHASE1:Hg19::chr7:22629318..22629324,+#_c4009426f4e10e17a6b918459d59675ep1@ENST00000439823
9.57e-57FFCP PHASE2:Hg19::chr7:22629318..22629324,+#_c4009426f4e10e17a6b918459d59675ep1@ENST00000439823
3.21e-56FFCP PHASE1:Hg19::chr22:21138313..21138336,+#_8c963b36b0ca8b279e409a294d06ca42p@chr22:21138313..21138336, +
3.21e-56FFCP PHASE2:Hg19::chr22:21138313..21138336,+#_8c963b36b0ca8b279e409a294d06ca42p@chr22:21138313..21138336, +
2.02e-55FFCP PHASE1:Hg19::chr3:30334038..30334060,+#_7cf0fe8d60cd423a4eb64dd183cd6012p@chr3:30334038..30334060, +
2.02e-55FFCP PHASE2:Hg19::chr3:30334038..30334060,+#_7cf0fe8d60cd423a4eb64dd183cd6012p@chr3:30334038..30334060, +
6.19e-55FFCP PHASE1:Hg19::chr11:102668074..102668126,-#_116422807a0f63047774238475ed8e2dp3@MMP1
6.19e-55FFCP PHASE2:Hg19::chr11:102668074..102668126,-#_116422807a0f63047774238475ed8e2dp3@MMP1
9.6e-54FFCP PHASE2:Hg19::chr2:228735763..228735772,+#_f44b3b4829e24565baad6a39ddb29cf7p2@WDR69
9.6e-54FFCP PHASE1:Hg19::chr2:228735763..228735772,+#_f44b3b4829e24565baad6a39ddb29cf7p2@WDR69
3.87e-53FFCP PHASE1:Hg19::chr11:102661061..102661115,-#_29860cca7e67a056c93edc334394f51cp@chr11:102661061..102661115, -
3.87e-53FFCP PHASE2:Hg19::chr11:102661061..102661115,-#_29860cca7e67a056c93edc334394f51cp@chr11:102661061..102661115, -
4.15e-53FFCP PHASE1:Hg19::chr11:102668708..102668742,+#_a55b3c2931d6304c00e92abe2b518ffcp@chr11:102668708..102668742, +
4.15e-53FFCP PHASE2:Hg19::chr11:102668708..102668742,+#_a55b3c2931d6304c00e92abe2b518ffcp@chr11:102668708..102668742, +
1.01e-52FFCP PHASE1:Hg19::chr11:102668160..102668174,+#_411cffac8d3c1ce02f474f3b9a56595fp@chr11:102668160..102668174, +
1.01e-52FFCP PHASE2:Hg19::chr11:102668160..102668174,+#_411cffac8d3c1ce02f474f3b9a56595fp@chr11:102668160..102668174, +
1.29e-51FFCP PHASE2:Hg19::chr4:70653649..70653665,-#_7331994ebf3177fd97a9b39ff70b0133p4@SULT1B1
1.29e-51FFCP PHASE1:Hg19::chr4:70653649..70653665,-#_7331994ebf3177fd97a9b39ff70b0133p4@SULT1B1
1.41e-51FFCP PHASE1:Hg19::chr8:42037883..42037900,-#_7a084f5fe4dc54098beeda69a795c278p@chr8:42037883..42037900, -
1.41e-51FFCP PHASE2:Hg19::chr8:42037883..42037900,-#_7a084f5fe4dc54098beeda69a795c278p@chr8:42037883..42037900, -
3.51e-51FFCP PHASE2:Hg19::chr11:102667477..102667490,-#_44fe691a5e30f127bf725aaf28682d77p@chr11:102667477..102667490, -
3.51e-51FFCP PHASE1:Hg19::chr11:102667477..102667490,-#_44fe691a5e30f127bf725aaf28682d77p@chr11:102667477..102667490, -
9.34e-51FFCP PHASE2:Mm9::chr17:75578018..75578028,+#_006c97e19766a9ccaaad597f9e5b661bp14@Ltbp1
9.34e-51FFCP PHASE1:Mm9::chr17:75578018..75578028,+#_006c97e19766a9ccaaad597f9e5b661bp14@Ltbp1
1.57e-50FFCP PHASE2:Hg19::chr4:74703963..74703975,+#_95b9e34c7251b7246820320350fee254p@chr4:74703963..74703975, +
1.57e-50FFCP PHASE1:Hg19::chr4:74703963..74703975,+#_95b9e34c7251b7246820320350fee254p@chr4:74703963..74703975, +
1.67e-50FFCP PHASE1:Mm9::chr10:67598016..67598032,-#_ab5dbbf3b64682bf444ebc3f17430505p@chr10:67598016..67598032, -
1.67e-50FFCP PHASE2:Mm9::chr10:67598016..67598032,-#_ab5dbbf3b64682bf444ebc3f17430505p@chr10:67598016..67598032, -
2.23e-50FFCP PHASE2:Hg19::chr22:21138343..21138378,+#_238378d78da3357491660c4d529e9e22p@chr22:21138343..21138378, +
2.23e-50FFCP PHASE1:Hg19::chr22:21138343..21138378,+#_238378d78da3357491660c4d529e9e22p@chr22:21138343..21138378, +
2.49e-50FFCP PHASE1:Hg19::chr11:102663449..102663467,-#_6c2e9ee2f82608414f07a47e9b8f40d8p@chr11:102663449..102663467, -
2.49e-50FFCP PHASE2:Hg19::chr11:102663449..102663467,-#_6c2e9ee2f82608414f07a47e9b8f40d8p@chr11:102663449..102663467, -
9.42e-50FFCP PHASE1:Hg19::chr10:4823096..4823144,-#_925925b2f28469f471ce999e4af1c99dp@chr10:4823096..4823144, -
9.42e-50FFCP PHASE2:Hg19::chr10:4823096..4823144,-#_925925b2f28469f471ce999e4af1c99dp@chr10:4823096..4823144, -
9.47e-50FFCP PHASE1:Hg19::chr11:102661460..102661475,-#_fcb5b2aaab94f39a369917321d94fe8ep@chr11:102661460..102661475, -
9.47e-50FFCP PHASE2:Hg19::chr11:102661460..102661475,-#_fcb5b2aaab94f39a369917321d94fe8ep@chr11:102661460..102661475, -
1.6e-49FFCP PHASE1:Mm9::chr11:118164535..118164544,-#_c7193bd75c6bd2256826e031e57a23bdp@chr11:118164535..118164544, -
1.6e-49FFCP PHASE2:Mm9::chrX:160840025..160840037,+#_c7193bd75c6bd2256826e031e57a23bdp@chrX:160840025..160840037, +
1.6e-49FFCP PHASE1:Mm9::chr6:128920492..128920498,-#_c7193bd75c6bd2256826e031e57a23bdp@chr6:128920492..128920498, -
1.6e-49FFCP PHASE1:Mm9::chrX:160840025..160840037,+#_c7193bd75c6bd2256826e031e57a23bdp@chrX:160840025..160840037, +
1.6e-49FFCP PHASE2:Mm9::chrX:160840048..160840057,+#_c7193bd75c6bd2256826e031e57a23bdp@chrX:160840048..160840057, +
1.6e-49FFCP PHASE2:Mm9::chr11:118164535..118164544,-#_c7193bd75c6bd2256826e031e57a23bdp@chr11:118164535..118164544, -
1.6e-49FFCP PHASE1:Mm9::chrX:160840048..160840057,+#_c7193bd75c6bd2256826e031e57a23bdp@chrX:160840048..160840057, +
1.6e-49FFCP PHASE1:Mm9::chr17:71340031..71340044,-#_c7193bd75c6bd2256826e031e57a23bdp5@Myl12b
1.6e-49FFCP PHASE2:Mm9::chr17:71340031..71340044,-#_c7193bd75c6bd2256826e031e57a23bdp5@Myl12b
1.6e-49FFCP PHASE2:Mm9::chr6:128920492..128920498,-#_c7193bd75c6bd2256826e031e57a23bdp@chr6:128920492..128920498, -
2.33e-49FFCP PHASE1:Mm9::chr4:145000183..145000220,+#_bb9e03ce26dd7a016b3dcf06e2901e8bp1@ENSMUST00000150529
2.33e-49FFCP PHASE2:Mm9::chr4:145000183..145000220,+#_bb9e03ce26dd7a016b3dcf06e2901e8bp1@ENSMUST00000150529
2.76e-49FFCP PHASE2:Hg19::chr5:54281586..54281597,-#_9e5ba80b0b317c18c8f7d76ba1622860p5@ESM1
2.76e-49FFCP PHASE1:Hg19::chr5:54281586..54281597,-#_9e5ba80b0b317c18c8f7d76ba1622860p5@ESM1
3.91e-49FFCP PHASE1:Hg19::chr11:102662218..102662229,-#_030bbcca6aacdc14661c2859ea5729efp@chr11:102662218..102662229, -
3.91e-49FFCP PHASE2:Hg19::chr11:102662218..102662229,-#_030bbcca6aacdc14661c2859ea5729efp@chr11:102662218..102662229, -
5.86e-49FFCP PHASE2:Hg19::chr7:33944150..33944169,+#_33c4f131df5276ccef9403bc1384f180p8@BMPER
5.86e-49FFCP PHASE1:Hg19::chr7:33944150..33944169,+#_33c4f131df5276ccef9403bc1384f180p8@BMPER
1.12e-48FFCP PHASE2:Hg19::chr4:70653673..70653688,-#_b23e6b9423a4617518e95ff754c090f5p3@SULT1B1
1.12e-48FFCP PHASE1:Hg19::chr4:70653673..70653688,-#_b23e6b9423a4617518e95ff754c090f5p3@SULT1B1

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0004573&oldid=3277668"