UBERON:0006904: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| (One intermediate revision by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment=Editor note: merged in 'head mesoderm' from XAO/AAO and EFO here. Partially implements UBERONREF:0000002 NC meeting scheme | |comment=Editor note: merged in 'head mesoderm' from XAO/AAO and EFO here. Partially implements UBERONREF:0000002 NC meeting scheme | ||
|created_by= | |created_by= | ||
| | |def= | ||
|derives_from= | |derives_from= | ||
|develops_from=UBERON:0000926;;UBERON:0003063 | |develops_from=UBERON:0000926;;UBERON:0003063 | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0006904 | |||
|is_a=UBERON:0004120 ;;UBERON:0005253 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=head mesenchyme from mesoderm | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of= | |part_of= | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset=vertebrate_core | ||
| | |synonym="cranial mesoderm" RELATED [UBERON:0005280];;"head mesenchyme derived from mesoderm" EXACT [];;"head mesenchyme from head mesoderm" EXACT [EHDAA2:0001118];;"head mesenchyme from mesoderm" EXACT [];;"head mesoderm" RELATED [AAO:0011051, UBERON:0005280];;"mesenchyme derived from head mesoderm" EXACT [EHDAA:1057];;"mesenchyme from head mesoderm" EXACT [] | ||
|union_of= | |||
|xref=AAO:0011051;;EFO:0003337;;EFO:0003603;;EHDAA2:0001118;;EHDAA:655;;EMAPA:16099;;EMAPA:16270;;TAO:0000998;;VHOG:0000185;;XAO:0000053;;ZFA:0000998 | |||
}} | }} | ||
Latest revision as of 17:59, 12 September 2014
| Name: | head mesenchyme from mesoderm | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Xrefs: |
| ||
| Synonyms: |
"cranial mesoderm" RELATED [UBERON:0005280] "head mesenchyme derived from mesoderm" EXACT [] "head mesenchyme from head mesoderm" EXACT [EHDAA2:0001118] "head mesenchyme from mesoderm" EXACT [] "head mesoderm" RELATED [AAO:0011051, UBERON:0005280] "mesenchyme derived from head mesoderm" EXACT [EHDAA:1057] "mesenchyme from head mesoderm" EXACT [] | ||
| Comments: | Editor note: merged in 'head mesoderm' from XAO/AAO and EFO here. Partially implements UBERONREF:0000002 NC meeting scheme | ||
| Subset: | vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0004120(mesoderm-derived structure),UBERON:0005253(head mesenchyme) |
|---|---|
| develops_from: | UBERON:0000926(mesoderm),UBERON:0003063(prechordal plate) |
Children
| is a: | UBERON:0005705 (primary palate mesenchyme),UBERON:0006230 (extrinsic ocular pre-muscle mass),UBERON:0009617 (head paraxial mesoderm) |
|---|---|
| develops from: | UBERON:0002376 (cranial muscle) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0006904 (head mesenchyme from mesoderm), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
No analysis results
