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{{UBERON
{{UBERON
|id=UBERON:0009617
|alt_id=
|name=head paraxial mesoderm
|namespace=
|def="Bilateral mesenchymal mesoderm parallel and immediately adjacent to the neural tube/notochord; it generates a subset of extra-ocular, and other head, muscles." [PMID:21610022]
|xref=EHDAA2:0000736;;EHDAA:364;;EMAPA:16171
|is_a=UBERON:0003104;;UBERON:0004120;;UBERON:0005291
|synonym="cephalic paraxial mesoderm" EXACT [UBERON:cjm];;"head paraxial mesenchyme" EXACT [EHDAA2:0000736]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="Bilateral mesenchymal mesoderm parallel and immediately adjacent to the neural tube/notochord; it generates a subset of extra-ocular, and other head, muscles." [PMID:21610022]
|subset=
|derives_from=
|derives_from=
|develops_from=UBERON:0000926
|develops_from=UBERON:0000926
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0009617
|is_a=UBERON:0006904
|is_obsolete=
|located_in=
|located_in=
|name=head paraxial mesoderm
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0003077;;UBERON:0005253
|part_of=UBERON:0003077;;UBERON:0005253
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="cephalic paraxial mesoderm" EXACT [UBERON:cjm];;"head paraxial mesenchyme" EXACT [EHDAA2:0000736]
|union_of=
|xref=EHDAA2:0000736;;EHDAA:364;;EMAPA:16171
}}
}}

Latest revision as of 18:05, 12 September 2014

Name:head paraxial mesoderm
Namespace:FANTOM
Definition:"Bilateral mesenchymal mesoderm parallel and immediately adjacent to the neural tube/notochord; it generates a subset of extra-ocular, and other head, muscles." [PMID:21610022]
Xrefs:
links:

EHDAA2:0000736
EHDAA:364

EMAPA:16171
Synonyms: "cephalic paraxial mesoderm" EXACT [UBERON:cjm]
"head paraxial mesenchyme" EXACT [EHDAA2:0000736]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0006904(head mesenchyme from mesoderm)
develops_from:UBERON:0000926(mesoderm)
part_of:UBERON:0003077(paraxial mesoderm),UBERON:0005253(head mesenchyme)



Children

develops from:UBERON:0004761 (cartilaginous neurocranium),UBERON:0007647 (ectomeninx)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0009617 (head paraxial mesoderm), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.87e-86FFCP PHASE1:Mm9::chr3:154693281..154693317,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr3:154693281..154693317, -
1.87e-86FFCP PHASE1:Mm9::chr2:128881546..128881553,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr2:128881546..128881553, -
1.87e-86FFCP PHASE2:Mm9::chr2:73232344..73232356,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr2:73232344..73232356, -
1.87e-86FFCP PHASE2:Mm9::chr1:172843885..172843890,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr1:172843885..172843890, -
1.87e-86FFCP PHASE1:Mm9::chr7:109265277..109265288,-#_c6d67655ae3e8e9acffeefba96516e6ap4@Chrna10
1.87e-86FFCP PHASE1:Mm9::chr5:3909290..3909299,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr5:3909290..3909299, +
1.87e-86FFCP PHASE1:Mm9::chr4:115556939..115556945,+#_c6d67655ae3e8e9acffeefba96516e6ap4@Kncn
1.87e-86FFCP PHASE1:Mm9::chr10:67371994..67372010,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr10:67371994..67372010, +
1.87e-86FFCP PHASE2:Mm9::chr1:94627290..94627299,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr1:94627290..94627299, -
1.87e-86FFCP PHASE1:Mm9::chr9:42207697..42207705,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr9:42207697..42207705, -
1.87e-86FFCP PHASE1:Mm9::chr7:27964761..27964768,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr7:27964761..27964768, +
1.87e-86FFCP PHASE2:Mm9::chr9:42207983..42207995,-#_c6d67655ae3e8e9acffeefba96516e6ap3@Tecta
1.87e-86FFCP PHASE1:Mm9::chr9:56208792..56208814,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr9:56208792..56208814, -
1.87e-86FFCP PHASE1:Mm9::chr15:58480061..58480066,+#_c6d67655ae3e8e9acffeefba96516e6ap5@Fer1l6
1.87e-86FFCP PHASE1:Mm9::chr13:76964459..76964469,+#_c6d67655ae3e8e9acffeefba96516e6ap15@Mctp1
1.87e-86FFCP PHASE2:Mm9::chr7:133957514..133957529,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr7:133957514..133957529, +
1.87e-86FFCP PHASE2:Mm9::chr3:69811590..69811601,+#_c6d67655ae3e8e9acffeefba96516e6ap1@Otol1
1.87e-86FFCP PHASE2:Mm9::chr10:107349378..107349390,-#_c6d67655ae3e8e9acffeefba96516e6ap1@Otogl
1.87e-86FFCP PHASE1:Mm9::chr5:150945209..150945220,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr5:150945209..150945220, +
1.87e-86FFCP PHASE2:Mm9::chr17:13983198..13983203,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr17:13983198..13983203, +
1.87e-86FFCP PHASE1:Mm9::chr9:41495920..41495928,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr9:41495920..41495928, -
1.87e-86FFCP PHASE1:Mm9::chr2:53464178..53464186,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr2:53464178..53464186, +
1.87e-86FFCP PHASE2:Mm9::chr13:43699188..43699216,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr13:43699188..43699216, +
1.87e-86FFCP PHASE2:Mm9::chr9:42207375..42207384,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr9:42207375..42207384, -
1.87e-86FFCP PHASE2:Mm9::chr6:113251606..113251613,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr6:113251606..113251613, +
1.87e-86FFCP PHASE1:Mm9::chr4:151505798..151505818,-#_c6d67655ae3e8e9acffeefba96516e6ap21@Espn
1.87e-86FFCP PHASE1:Mm9::chr15:103146966..103146971,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr15:103146966..103146971, -
1.87e-86FFCP PHASE1:Mm9::chr19:55256373..55256384,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr19:55256373..55256384, +
1.87e-86FFCP PHASE1:Mm9::chr10:107349309..107349318,-#_c6d67655ae3e8e9acffeefba96516e6ap4@Otogl
1.87e-86FFCP PHASE2:Mm9::chr5:144115382..144115389,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr5:144115382..144115389, +
1.87e-86FFCP PHASE2:Mm9::chr13:58283583..58283607,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr13:58283583..58283607, -
1.87e-86FFCP PHASE1:Mm9::chr1:182528371..182528385,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr1:182528371..182528385, +
1.87e-86FFCP PHASE1:Mm9::chr14:31283085..31283097,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr14:31283085..31283097, -
1.87e-86FFCP PHASE2:Mm9::chr11:4689837..4689845,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr11:4689837..4689845, -
1.87e-86FFCP PHASE1:Mm9::chr6:113251614..113251623,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr6:113251614..113251623, +
1.87e-86FFCP PHASE1:Mm9::chr19:10536767..10536777,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr19:10536767..10536777, -
1.87e-86FFCP PHASE1:Mm9::chr17:13983102..13983126,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr17:13983102..13983126, +
1.87e-86FFCP PHASE2:Mm9::chr3:154459231..154459240,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr3:154459231..154459240, +
1.87e-86FFCP PHASE2:Mm9::chr2:67011956..67011967,+#_c6d67655ae3e8e9acffeefba96516e6ap1@Gm1322
1.87e-86FFCP PHASE1:Mm9::chr3:35012397..35012405,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr3:35012397..35012405, +
1.87e-86FFCP PHASE1:Mm9::chr15:89215306..89215315,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr15:89215306..89215315, +
1.87e-86FFCP PHASE2:Mm9::chr17:27252925..27252939,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr17:27252925..27252939, +
1.87e-86FFCP PHASE1:Mm9::chr12:109905468..109905474,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr12:109905468..109905474, +
1.87e-86FFCP PHASE2:Mm9::chr12:13572961..13572974,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr12:13572961..13572974, +
1.87e-86FFCP PHASE1:Mm9::chr16:93971325..93971337,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr16:93971325..93971337, -
1.87e-86FFCP PHASE2:Mm9::chr15:58022966..58022995,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr15:58022966..58022995, -
1.87e-86FFCP PHASE1:Mm9::chr9:42207887..42207960,-#_c6d67655ae3e8e9acffeefba96516e6ap1@Tecta
1.87e-86FFCP PHASE1:Mm9::chr1:93235253..93235264,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr1:93235253..93235264, +
1.87e-86FFCP PHASE2:Mm9::chr2:14685072..14685084,+#_c6d67655ae3e8e9acffeefba96516e6ap41@Cacnb2
1.87e-86FFCP PHASE2:Mm9::chr13:78322383..78322395,-#_c6d67655ae3e8e9acffeefba96516e6ap2@uc007rhb.1
1.87e-86FFCP PHASE2:Mm9::chr1:182528388..182528403,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr1:182528388..182528403, +
1.87e-86FFCP PHASE1:Mm9::chr9:66860888..66860899,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr9:66860888..66860899, +
1.87e-86FFCP PHASE1:Mm9::chr8:13435173..13435186,+#_c6d67655ae3e8e9acffeefba96516e6ap6@Fam70b
1.87e-86FFCP PHASE1:Mm9::chr13:78322383..78322395,-#_c6d67655ae3e8e9acffeefba96516e6ap2@uc007rhb.1
1.87e-86FFCP PHASE2:Mm9::chr5:30710416..30710440,-#_c6d67655ae3e8e9acffeefba96516e6ap2@Otof
1.87e-86FFCP PHASE1:Mm9::chr7:109052297..109052300,-#_c6d67655ae3e8e9acffeefba96516e6ap2@Tomt
1.87e-86FFCP PHASE1:Mm9::chr11:8405038..8405048,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr11:8405038..8405048, -
1.87e-86FFCP PHASE2:Mm9::chr13:37195838..37195870,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr13:37195838..37195870, -
1.87e-86FFCP PHASE2:Mm9::chr15:103146966..103146971,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr15:103146966..103146971, -
1.87e-86FFCP PHASE1:Mm9::chr5:30710403..30710406,-#_c6d67655ae3e8e9acffeefba96516e6ap10@Otof
1.87e-86FFCP PHASE1:Mm9::chr9:42206745..42206774,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr9:42206745..42206774, -
1.87e-86FFCP PHASE1:Mm9::chr2:67011921..67011934,+#_c6d67655ae3e8e9acffeefba96516e6ap2@Gm1322
1.87e-86FFCP PHASE1:Mm9::chr14:63099970..63099980,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr14:63099970..63099980, -
1.87e-86FFCP PHASE2:Mm9::chr4:133802857..133802884,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr4:133802857..133802884, +
1.87e-86FFCP PHASE1:Mm9::chr17:31335869..31335899,-#_c6d67655ae3e8e9acffeefba96516e6ap1@Tmprss3
1.87e-86FFCP PHASE2:Mm9::chr16:93971367..93971379,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr16:93971367..93971379, -
1.87e-86FFCP PHASE2:Mm9::chr10:107156949..107156956,-#_c6d67655ae3e8e9acffeefba96516e6ap3@Ptprq
1.87e-86FFCP PHASE1:Mm9::chrX:154140800..154140810,+#_c6d67655ae3e8e9acffeefba96516e6ap@chrX:154140800..154140810, +
1.87e-86FFCP PHASE1:Mm9::chr3:81012915..81012923,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr3:81012915..81012923, +
1.87e-86FFCP PHASE2:Mm9::chr8:13425469..13425503,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr8:13425469..13425503, +
1.87e-86FFCP PHASE2:Mm9::chr6:29428397..29428407,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr6:29428397..29428407, -
1.87e-86FFCP PHASE2:Mm9::chr4:115556939..115556945,+#_c6d67655ae3e8e9acffeefba96516e6ap4@Kncn
1.87e-86FFCP PHASE2:Mm9::chr17:13983095..13983100,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr17:13983095..13983100, +
1.87e-86FFCP PHASE1:Mm9::chr14:47293487..47293493,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr14:47293487..47293493, -
1.87e-86FFCP PHASE1:Mm9::chr12:77084875..77084885,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr12:77084875..77084885, +
1.87e-86FFCP PHASE2:Mm9::chr15:65641779..65641790,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr15:65641779..65641790, +
1.87e-86FFCP PHASE2:Mm9::chr12:109905468..109905474,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr12:109905468..109905474, +
1.87e-86FFCP PHASE2:Mm9::chr18:66033526..66033539,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr18:66033526..66033539, -
1.87e-86FFCP PHASE2:Mm9::chr15:89215333..89215341,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr15:89215333..89215341, +
1.87e-86FFCP PHASE2:Mm9::chr14:31283085..31283097,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr14:31283085..31283097, -
1.87e-86FFCP PHASE2:Mm9::chr7:29733825..29733837,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr7:29733825..29733837, -
1.87e-86FFCP PHASE1:Mm9::chr3:58626291..58626298,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr3:58626291..58626298, -
1.87e-86FFCP PHASE2:Mm9::chr19:22767090..22767099,+#_c6d67655ae3e8e9acffeefba96516e6ap18@Trpm3
1.87e-86FFCP PHASE2:Mm9::chr18:81314626..81314636,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr18:81314626..81314636, +
1.87e-86FFCP PHASE2:Mm9::chr2:75320183..75320189,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr2:75320183..75320189, +
1.87e-86FFCP PHASE1:Mm9::chr7:133957514..133957529,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr7:133957514..133957529, +
1.87e-86FFCP PHASE1:Mm9::chr12:13508046..13508055,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr12:13508046..13508055, +
1.87e-86FFCP PHASE2:Mm9::chr2:121206695..121206711,-#_c6d67655ae3e8e9acffeefba96516e6ap1@Strc
1.87e-86FFCP PHASE1:Mm9::chr18:81314626..81314636,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr18:81314626..81314636, +
1.87e-86FFCP PHASE2:Mm9::chr19:10536767..10536777,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr19:10536767..10536777, -
1.87e-86FFCP PHASE2:Mm9::chr2:170417150..170417155,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr2:170417150..170417155, -
1.87e-86FFCP PHASE1:Mm9::chr9:42208142..42208157,-#_c6d67655ae3e8e9acffeefba96516e6ap10@Tecta
1.87e-86FFCP PHASE1:Mm9::chr13:37195838..37195870,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr13:37195838..37195870, -
1.87e-86FFCP PHASE1:Mm9::chr19:4140290..4140321,+#_c6d67655ae3e8e9acffeefba96516e6ap2@Gpr152
1.87e-86FFCP PHASE1:Mm9::chr11:11599532..11599539,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr11:11599532..11599539, -
1.87e-86FFCP PHASE2:Mm9::chr16:96494788..96494801,+#_c6d67655ae3e8e9acffeefba96516e6ap12@B3galt5
1.87e-86FFCP PHASE2:Mm9::chr12:13508015..13508019,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr12:13508015..13508019, +
1.87e-86FFCP PHASE2:Mm9::chr16:45693840..45693856,-#_c6d67655ae3e8e9acffeefba96516e6ap1@Tmprss7
1.87e-86FFCP PHASE1:Mm9::chr5:3909310..3909321,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr5:3909310..3909321, +
1.87e-86FFCP PHASE1:Mm9::chr4:115556972..115556979,+#_c6d67655ae3e8e9acffeefba96516e6ap3@Kncn

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