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{{UBERON
{{UBERON
|id=UBERON:0010253
|alt_id=
|name=1st arch maxillary mesenchyme from neural crest
|namespace=
|def=
|xref=EHDAA2:0000044
|is_a=UBERON:0010045;;UBERON:0010259
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=
|derives_from=
|derives_from=
|develops_from=UBERON:0002342
|develops_from=UBERON:0002342
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0010253
|is_a=UBERON:0010045 ;;UBERON:0010259
|is_obsolete=
|located_in=
|located_in=
|name=1st arch maxillary mesenchyme from neural crest
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0010045;;UBERON:0010258
|part_of=UBERON:0010045;;UBERON:0010258
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=EHDAA2:0000044
}}
}}

Latest revision as of 18:08, 12 September 2014

Name:1st arch maxillary mesenchyme from neural crest
Namespace:FANTOM
Xrefs:
links:
EHDAA2:0000044

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0010045(1st arch maxillary mesenchyme),UBERON:0010259(1st arch mesenchyme from neural crest)
develops_from:UBERON:0002342(neural crest)
part_of:UBERON:0010045(1st arch maxillary mesenchyme),UBERON:0010258(mesenchyme from rhombencephalic neural crest)



Children

develops from:UBERON:0005705 (primary palate mesenchyme),UBERON:0010334 (maxillary process mesenchyme from neural crest)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0010253 (1st arch maxillary mesenchyme from neural crest), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
5.42e-195FFCP PHASE1:Hg19::chr17:54893192..54893195,-#_cc3a3f88520877e0679856ce86daa90bp14@C17orf67
5.42e-195FFCP PHASE2:Hg19::chr17:54893192..54893195,-#_cc3a3f88520877e0679856ce86daa90bp14@C17orf67
9.37e-99FFCP PHASE1:Hg19::chr17:54893213..54893220,-#_b22a33518e44be93d5e6f38fbd0a7499p12@C17orf67
9.37e-99FFCP PHASE1:Hg19::chr17:54893269..54893278,-#_b22a33518e44be93d5e6f38fbd0a7499p11@C17orf67
9.37e-99FFCP PHASE2:Hg19::chr17:54893213..54893220,-#_b22a33518e44be93d5e6f38fbd0a7499p12@C17orf67
9.37e-99FFCP PHASE2:Hg19::chr8:57353655..57353662,-#_b22a33518e44be93d5e6f38fbd0a7499p@chr8:57353655..57353662, -
9.37e-99FFCP PHASE1:Hg19::chr17:54893292..54893300,-#_b22a33518e44be93d5e6f38fbd0a7499p13@C17orf67
9.37e-99FFCP PHASE2:Hg19::chr17:54893269..54893278,-#_b22a33518e44be93d5e6f38fbd0a7499p11@C17orf67
9.37e-99FFCP PHASE2:Hg19::chr17:54893292..54893300,-#_b22a33518e44be93d5e6f38fbd0a7499p13@C17orf67
9.37e-99FFCP PHASE1:Hg19::chr8:57353655..57353662,-#_b22a33518e44be93d5e6f38fbd0a7499p@chr8:57353655..57353662, -
2.39e-66FFCP PHASE1:Hg19::chr5:75912402..75912418,-#_e3850f18208c7b57158ce849bb7ffe29p@chr5:75912402..75912418, -
2.39e-66FFCP PHASE2:Hg19::chr5:75912402..75912418,-#_e3850f18208c7b57158ce849bb7ffe29p@chr5:75912402..75912418, -
2.39e-66FFCP PHASE1:Hg19::chr4:151503647..151503656,+#_e3850f18208c7b57158ce849bb7ffe29p14@MAB21L2
2.39e-66FFCP PHASE2:Hg19::chr4:151503647..151503656,+#_e3850f18208c7b57158ce849bb7ffe29p14@MAB21L2
4.66e-66FFCP PHASE1:Hg19::chr4:151505582..151505614,+#_3590e19f90027c7ef82f8d711e1be77ep@chr4:151505582..151505614, +
4.66e-66FFCP PHASE2:Hg19::chr4:151505582..151505614,+#_3590e19f90027c7ef82f8d711e1be77ep@chr4:151505582..151505614, +
1.46e-50FFCP PHASE2:Hg19::chr8:57354278..57354286,+#_9136bc3d946be652acb5ec2ab15f4362p@chr8:57354278..57354286, +
1.46e-50FFCP PHASE2:Hg19::chr17:54893196..54893207,-#_9136bc3d946be652acb5ec2ab15f4362p9@C17orf67
1.46e-50FFCP PHASE2:Hg19::chr3:157823323..157823328,+#_9136bc3d946be652acb5ec2ab15f4362p17@RSRC1
1.46e-50FFCP PHASE1:Hg19::chr3:157823323..157823328,+#_9136bc3d946be652acb5ec2ab15f4362p17@RSRC1
1.46e-50FFCP PHASE1:Hg19::chr8:57354278..57354286,+#_9136bc3d946be652acb5ec2ab15f4362p@chr8:57354278..57354286, +
1.46e-50FFCP PHASE1:Hg19::chr17:54893196..54893207,-#_9136bc3d946be652acb5ec2ab15f4362p9@C17orf67
2.42e-50FFCP PHASE1:Hg19::chr8:57802672..57802682,-#_c5bd2340ae30b5e27467ad2d1712e671p@chr8:57802672..57802682, -
2.42e-50FFCP PHASE2:Hg19::chr8:57802672..57802682,-#_c5bd2340ae30b5e27467ad2d1712e671p@chr8:57802672..57802682, -
3.99e-50FFCP PHASE2:Hg19::chr5:75913767..75913778,-#_239c939322f670f8daa46188d1718e8bp@chr5:75913767..75913778, -
3.99e-50FFCP PHASE2:Hg19::chr17:76930661..76930674,+#_239c939322f670f8daa46188d1718e8bp1@AK123925
3.99e-50FFCP PHASE2:Hg19::chr12:85673913..85673919,+#_239c939322f670f8daa46188d1718e8bp7@ALX1
3.99e-50FFCP PHASE1:Hg19::chr12:85673913..85673919,+#_239c939322f670f8daa46188d1718e8bp7@ALX1
3.99e-50FFCP PHASE1:Hg19::chr5:75913767..75913778,-#_239c939322f670f8daa46188d1718e8bp@chr5:75913767..75913778, -
3.99e-50FFCP PHASE1:Hg19::chr17:76930661..76930674,+#_239c939322f670f8daa46188d1718e8bp1@AK123925
6.58e-50FFCP PHASE1:Hg19::chr2:33519090..33519092,+#_d749d4f363e96226ed151ba97216b929p@chr2:33519090..33519092, +
6.58e-50FFCP PHASE2:Hg19::chr13:28961248..28961262,-#_d749d4f363e96226ed151ba97216b929p23@FLT1
6.58e-50FFCP PHASE1:Hg19::chr13:28961248..28961262,-#_d749d4f363e96226ed151ba97216b929p23@FLT1
6.58e-50FFCP PHASE2:Hg19::chr2:33519090..33519092,+#_d749d4f363e96226ed151ba97216b929p@chr2:33519090..33519092, +
6.62e-41FFCP PHASE1:Hg19::chr8:57353666..57353675,-#_11737163a82cb486ab767f66c00f6ffcp@chr8:57353666..57353675, -
6.62e-41FFCP PHASE2:Hg19::chr8:57354143..57354152,+#_11737163a82cb486ab767f66c00f6ffcp@chr8:57354143..57354152, +
6.62e-41FFCP PHASE2:Hg19::chr8:57353779..57353790,-#_11737163a82cb486ab767f66c00f6ffcp@chr8:57353779..57353790, -
6.62e-41FFCP PHASE2:Hg19::chr8:57353666..57353675,-#_11737163a82cb486ab767f66c00f6ffcp@chr8:57353666..57353675, -
6.62e-41FFCP PHASE1:Hg19::chr8:57353779..57353790,-#_11737163a82cb486ab767f66c00f6ffcp@chr8:57353779..57353790, -
6.62e-41FFCP PHASE1:Hg19::chr8:57354143..57354152,+#_11737163a82cb486ab767f66c00f6ffcp@chr8:57354143..57354152, +
1.48e-40FFCP PHASE1:Hg19::chr1:6615391..6615401,+#_292d448497dd3461f2913b25bce98a3dp2@TAS1R1
1.48e-40FFCP PHASE2:Hg19::chr20:49253452..49253461,-#_292d448497dd3461f2913b25bce98a3dp12@FAM65C
1.48e-40FFCP PHASE1:Hg19::chr1:75600308..75600316,+#_292d448497dd3461f2913b25bce98a3dp8@LHX8
1.48e-40FFCP PHASE2:Hg19::chr1:6615391..6615401,+#_292d448497dd3461f2913b25bce98a3dp2@TAS1R1
1.48e-40FFCP PHASE2:Hg19::chr1:75600308..75600316,+#_292d448497dd3461f2913b25bce98a3dp8@LHX8
1.48e-40FFCP PHASE1:Hg19::chr20:49253452..49253461,-#_292d448497dd3461f2913b25bce98a3dp12@FAM65C
2.21e-40FFCP PHASE1:Hg19::chr5:75912831..75912842,-#_e323ef72aba9264fa8b84ac8db0ac79ep@chr5:75912831..75912842, -
2.21e-40FFCP PHASE1:Hg19::chr16:67687543..67687559,-#_e323ef72aba9264fa8b84ac8db0ac79ep@chr16:67687543..67687559, -
2.21e-40FFCP PHASE2:Hg19::chr5:75912831..75912842,-#_e323ef72aba9264fa8b84ac8db0ac79ep@chr5:75912831..75912842, -
2.21e-40FFCP PHASE2:Hg19::chr16:67687543..67687559,-#_e323ef72aba9264fa8b84ac8db0ac79ep@chr16:67687543..67687559, -
3.3e-40FFCP PHASE1:Hg19::chr9:125165007..125165016,+#_d6a722d0a9efff635ead51757f619aaap@chr9:125165007..125165016, +
3.3e-40FFCP PHASE1:Hg19::chr6:46190219..46190230,-#_d6a722d0a9efff635ead51757f619aaap@chr6:46190219..46190230, -
3.3e-40FFCP PHASE2:Hg19::chr9:125165007..125165016,+#_d6a722d0a9efff635ead51757f619aaap@chr9:125165007..125165016, +
3.3e-40FFCP PHASE2:Hg19::chr6:46190219..46190230,-#_d6a722d0a9efff635ead51757f619aaap@chr6:46190219..46190230, -
1.84e-34FFCP PHASE1:Hg19::chr4:8594472..8594473,+#_e3c69f4750cc9992fa7b481cd8dcd94cp4@CPZ
1.84e-34FFCP PHASE2:Hg19::chr4:8594472..8594473,+#_e3c69f4750cc9992fa7b481cd8dcd94cp4@CPZ
1.84e-34FFCP PHASE1:Hg19::chr8:57359557..57359570,-#_e3c69f4750cc9992fa7b481cd8dcd94cp5@PENK
1.84e-34FFCP PHASE2:Hg19::chr10:15760985..15760992,-#_e3c69f4750cc9992fa7b481cd8dcd94cp@chr10:15760985..15760992, -
1.84e-34FFCP PHASE1:Hg19::chr10:15760985..15760992,-#_e3c69f4750cc9992fa7b481cd8dcd94cp@chr10:15760985..15760992, -
1.84e-34FFCP PHASE2:Hg19::chr8:57359557..57359570,-#_e3c69f4750cc9992fa7b481cd8dcd94cp5@PENK
2.58e-34FFCP PHASE1:Hg19::chr14:61125018..61125037,-#_eaecbbb655c128ed628b0e1fe8748bf1p9@SIX1
2.58e-34FFCP PHASE2:Hg19::chr14:61125018..61125037,-#_eaecbbb655c128ed628b0e1fe8748bf1p9@SIX1
5.05e-34FFCP PHASE1:Hg19::chr6:134327986..134327991,-#_f7cb2a589f09cd33a350c7ce477de0fbp@chr6:134327986..134327991, -
5.05e-34FFCP PHASE2:Hg19::chr6:134327986..134327991,-#_f7cb2a589f09cd33a350c7ce477de0fbp@chr6:134327986..134327991, -
7.06e-34FFCP PHASE1:Hg19::chr8:57353676..57353688,-#_fbc1db948cc75a07a6d10329aca797e3p@chr8:57353676..57353688, -
7.06e-34FFCP PHASE2:Hg19::chr13:58291223..58291226,+#_fbc1db948cc75a07a6d10329aca797e3p@chr13:58291223..58291226, +
7.06e-34FFCP PHASE1:Hg19::chr13:58291223..58291226,+#_fbc1db948cc75a07a6d10329aca797e3p@chr13:58291223..58291226, +
7.06e-34FFCP PHASE2:Hg19::chr8:57353676..57353688,-#_fbc1db948cc75a07a6d10329aca797e3p@chr8:57353676..57353688, -
9.85e-34FFCP PHASE1:Hg19::chr5:127873659..127873667,-#_90ec1b0ed5f5b63bb5cd6d89a87b06dcp12@FBN2
9.85e-34FFCP PHASE1:Hg19::chr5:19721484..19721507,-#_90ec1b0ed5f5b63bb5cd6d89a87b06dcp@chr5:19721484..19721507, -
9.85e-34FFCP PHASE1:Hg19::chrX:133792540..133792551,-#_90ec1b0ed5f5b63bb5cd6d89a87b06dcp4@PLAC1
9.85e-34FFCP PHASE2:Hg19::chr5:127873659..127873667,-#_90ec1b0ed5f5b63bb5cd6d89a87b06dcp12@FBN2
9.85e-34FFCP PHASE2:Hg19::chr5:19721484..19721507,-#_90ec1b0ed5f5b63bb5cd6d89a87b06dcp@chr5:19721484..19721507, -
9.85e-34FFCP PHASE2:Hg19::chrX:133792540..133792551,-#_90ec1b0ed5f5b63bb5cd6d89a87b06dcp4@PLAC1
7.48e-30FFCP PHASE1:Hg19::chr8:57353804..57353821,-#_8ad44e16ad73fe5f35e7fed1de0488f9p@chr8:57353804..57353821, -
7.48e-30FFCP PHASE1:Hg19::chr8:57354360..57354367,+#_8ad44e16ad73fe5f35e7fed1de0488f9p@chr8:57354360..57354367, +
7.48e-30FFCP PHASE2:Hg19::chr8:57353804..57353821,-#_8ad44e16ad73fe5f35e7fed1de0488f9p@chr8:57353804..57353821, -
7.48e-30FFCP PHASE1:Hg19::chr8:57353982..57353991,-#_8ad44e16ad73fe5f35e7fed1de0488f9p@chr8:57353982..57353991, -
7.48e-30FFCP PHASE2:Hg19::chr8:57354360..57354367,+#_8ad44e16ad73fe5f35e7fed1de0488f9p@chr8:57354360..57354367, +
7.48e-30FFCP PHASE2:Hg19::chr8:57353982..57353991,-#_8ad44e16ad73fe5f35e7fed1de0488f9p@chr8:57353982..57353991, -
9.99e-30FFCP PHASE2:Hg19::chr10:15762107..15762114,-#_48b1dadf074489f636ac5cc07f3f8754p10@ITGA8
9.99e-30FFCP PHASE1:Hg19::chr3:157824322..157824334,-#_48b1dadf074489f636ac5cc07f3f8754p7@SHOX2
9.99e-30FFCP PHASE1:Hg19::chr10:15762107..15762114,-#_48b1dadf074489f636ac5cc07f3f8754p10@ITGA8
9.99e-30FFCP PHASE2:Hg19::chr3:157824322..157824334,-#_48b1dadf074489f636ac5cc07f3f8754p7@SHOX2
1.33e-29FFCP PHASE2:Hg19::chr22:28193943..28193956,-#_d5f309ec467070aab5834c843092f5cfp@chr22:28193943..28193956, -
1.33e-29FFCP PHASE1:Hg19::chrX:132670143..132670152,-#_d5f309ec467070aab5834c843092f5cfp@chrX:132670143..132670152, -
1.33e-29FFCP PHASE1:Hg19::chr17:79071218..79071221,-#_d5f309ec467070aab5834c843092f5cfp@chr17:79071218..79071221, -
1.33e-29FFCP PHASE1:Hg19::chr22:28193943..28193956,-#_d5f309ec467070aab5834c843092f5cfp@chr22:28193943..28193956, -
1.33e-29FFCP PHASE2:Hg19::chrX:132670143..132670152,-#_d5f309ec467070aab5834c843092f5cfp@chrX:132670143..132670152, -
1.33e-29FFCP PHASE2:Hg19::chr17:79071218..79071221,-#_d5f309ec467070aab5834c843092f5cfp@chr17:79071218..79071221, -
1.78e-29FFCP PHASE2:Hg19::chr1:21904551..21904569,-#_d09b4353288ea96065e31f30ce0acc43p@chr1:21904551..21904569, -
1.78e-29FFCP PHASE1:Hg19::chr1:21904551..21904569,-#_d09b4353288ea96065e31f30ce0acc43p@chr1:21904551..21904569, -
3.16e-29FFCP PHASE2:Hg19::chr14:89044406..89044416,+#_76bf17b3d5c4d5ace0c9e18dcff90904p@chr14:89044406..89044416, +
3.16e-29FFCP PHASE2:Hg19::chr8:57359975..57359992,-#_76bf17b3d5c4d5ace0c9e18dcff90904p@chr8:57359975..57359992, -
3.16e-29FFCP PHASE1:Hg19::chr14:89044406..89044416,+#_76bf17b3d5c4d5ace0c9e18dcff90904p@chr14:89044406..89044416, +
3.16e-29FFCP PHASE1:Hg19::chr1:156470861..156470868,-#_76bf17b3d5c4d5ace0c9e18dcff90904p18@MEF2D
3.16e-29FFCP PHASE1:Hg19::chr8:57359975..57359992,-#_76bf17b3d5c4d5ace0c9e18dcff90904p@chr8:57359975..57359992, -
3.16e-29FFCP PHASE2:Hg19::chr1:156470861..156470868,-#_76bf17b3d5c4d5ace0c9e18dcff90904p18@MEF2D
4.2e-29FFCP PHASE1:Hg19::chr1:75602768..75602785,+#_a00ee9022160f05a424359256e2ce87dp@chr1:75602768..75602785, +
4.2e-29FFCP PHASE1:Hg19::chr13:36046127..36046134,+#_a00ee9022160f05a424359256e2ce87dp@chr13:36046127..36046134, +

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