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{{UBERON
{{UBERON
|id=UBERON:0010334
|alt_id=
|name=maxillary process mesenchyme from neural crest
|namespace=
|def=
|xref=EHDAA2:0004601
|is_a=UBERON:0009526;;UBERON:0010258
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=
|derives_from=
|derives_from=
|develops_from=UBERON:0002342;;UBERON:0010253
|develops_from=UBERON:0002342;;UBERON:0010253
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0010334
|is_a=UBERON:0009526 ;;UBERON:0010258
|is_obsolete=
|located_in=
|located_in=
|name=maxillary process mesenchyme from neural crest
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0009526
|part_of=UBERON:0009526
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=EHDAA2:0004601
}}
}}

Latest revision as of 18:09, 12 September 2014

Name:maxillary process mesenchyme from neural crest
Namespace:FANTOM
Xrefs:
links:
EHDAA2:0004601

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0009526(maxillary process mesenchyme),UBERON:0010258(mesenchyme from rhombencephalic neural crest)
develops_from:UBERON:0002342(neural crest),UBERON:0010253(1st arch maxillary mesenchyme from neural crest)
part_of:UBERON:0009526(maxillary process mesenchyme)



Children

develops from:UBERON:0002397 (maxilla),UBERON:0011628 (early premaxilla)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0010334 (maxillary process mesenchyme from neural crest), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
5.42e-195FFCP PHASE2:Hg19::chr17:54893192..54893195,-#_eb0419fde82b16d8298c7c853278e949p14@C17orf67
5.42e-195FFCP PHASE1:Hg19::chr17:54893192..54893195,-#_eb0419fde82b16d8298c7c853278e949p14@C17orf67
9.37e-99FFCP PHASE1:Hg19::chr8:57353655..57353662,-#_8f111b5efe7c6a893f2c592a40de8ad4p@chr8:57353655..57353662, -
9.37e-99FFCP PHASE1:Hg19::chr17:54893213..54893220,-#_8f111b5efe7c6a893f2c592a40de8ad4p12@C17orf67
9.37e-99FFCP PHASE1:Hg19::chr17:54893269..54893278,-#_8f111b5efe7c6a893f2c592a40de8ad4p11@C17orf67
9.37e-99FFCP PHASE2:Hg19::chr17:54893213..54893220,-#_8f111b5efe7c6a893f2c592a40de8ad4p12@C17orf67
9.37e-99FFCP PHASE2:Hg19::chr8:57353655..57353662,-#_8f111b5efe7c6a893f2c592a40de8ad4p@chr8:57353655..57353662, -
9.37e-99FFCP PHASE1:Hg19::chr17:54893292..54893300,-#_8f111b5efe7c6a893f2c592a40de8ad4p13@C17orf67
9.37e-99FFCP PHASE2:Hg19::chr17:54893269..54893278,-#_8f111b5efe7c6a893f2c592a40de8ad4p11@C17orf67
9.37e-99FFCP PHASE2:Hg19::chr17:54893292..54893300,-#_8f111b5efe7c6a893f2c592a40de8ad4p13@C17orf67
2.39e-66FFCP PHASE2:Hg19::chr4:151503647..151503656,+#_53135f5d2eb5136021122b015920306ap14@MAB21L2
2.39e-66FFCP PHASE1:Hg19::chr5:75912402..75912418,-#_53135f5d2eb5136021122b015920306ap@chr5:75912402..75912418, -
2.39e-66FFCP PHASE2:Hg19::chr5:75912402..75912418,-#_53135f5d2eb5136021122b015920306ap@chr5:75912402..75912418, -
2.39e-66FFCP PHASE1:Hg19::chr4:151503647..151503656,+#_53135f5d2eb5136021122b015920306ap14@MAB21L2
4.66e-66FFCP PHASE1:Hg19::chr4:151505582..151505614,+#_64a4b105cd1a1c9772ad88d74c172c5bp@chr4:151505582..151505614, +
4.66e-66FFCP PHASE2:Hg19::chr4:151505582..151505614,+#_64a4b105cd1a1c9772ad88d74c172c5bp@chr4:151505582..151505614, +
1.46e-50FFCP PHASE2:Hg19::chr8:57354278..57354286,+#_55f6e255e0d285cc027b33d6de5132b1p@chr8:57354278..57354286, +
1.46e-50FFCP PHASE2:Hg19::chr17:54893196..54893207,-#_55f6e255e0d285cc027b33d6de5132b1p9@C17orf67
1.46e-50FFCP PHASE2:Hg19::chr3:157823323..157823328,+#_55f6e255e0d285cc027b33d6de5132b1p17@RSRC1
1.46e-50FFCP PHASE1:Hg19::chr3:157823323..157823328,+#_55f6e255e0d285cc027b33d6de5132b1p17@RSRC1
1.46e-50FFCP PHASE1:Hg19::chr8:57354278..57354286,+#_55f6e255e0d285cc027b33d6de5132b1p@chr8:57354278..57354286, +
1.46e-50FFCP PHASE1:Hg19::chr17:54893196..54893207,-#_55f6e255e0d285cc027b33d6de5132b1p9@C17orf67
2.42e-50FFCP PHASE1:Hg19::chr8:57802672..57802682,-#_d0191e35a3ad93b1e999bdd180cf3452p@chr8:57802672..57802682, -
2.42e-50FFCP PHASE2:Hg19::chr8:57802672..57802682,-#_d0191e35a3ad93b1e999bdd180cf3452p@chr8:57802672..57802682, -
3.99e-50FFCP PHASE1:Hg19::chr12:85673913..85673919,+#_6377b298301ee3e8f38d10ac404b363dp7@ALX1
3.99e-50FFCP PHASE2:Hg19::chr17:76930661..76930674,+#_6377b298301ee3e8f38d10ac404b363dp1@AK123925
3.99e-50FFCP PHASE2:Hg19::chr5:75913767..75913778,-#_6377b298301ee3e8f38d10ac404b363dp@chr5:75913767..75913778, -
3.99e-50FFCP PHASE2:Hg19::chr12:85673913..85673919,+#_6377b298301ee3e8f38d10ac404b363dp7@ALX1
3.99e-50FFCP PHASE1:Hg19::chr17:76930661..76930674,+#_6377b298301ee3e8f38d10ac404b363dp1@AK123925
3.99e-50FFCP PHASE1:Hg19::chr5:75913767..75913778,-#_6377b298301ee3e8f38d10ac404b363dp@chr5:75913767..75913778, -
6.58e-50FFCP PHASE2:Hg19::chr2:33519090..33519092,+#_40645d074df498574a4e8c3991c8d0bdp@chr2:33519090..33519092, +
6.58e-50FFCP PHASE1:Hg19::chr13:28961248..28961262,-#_40645d074df498574a4e8c3991c8d0bdp23@FLT1
6.58e-50FFCP PHASE1:Hg19::chr2:33519090..33519092,+#_40645d074df498574a4e8c3991c8d0bdp@chr2:33519090..33519092, +
6.58e-50FFCP PHASE2:Hg19::chr13:28961248..28961262,-#_40645d074df498574a4e8c3991c8d0bdp23@FLT1
6.62e-41FFCP PHASE1:Hg19::chr8:57353779..57353790,-#_b925e42d318102f65f920bc966eec958p@chr8:57353779..57353790, -
6.62e-41FFCP PHASE1:Hg19::chr8:57354143..57354152,+#_b925e42d318102f65f920bc966eec958p@chr8:57354143..57354152, +
6.62e-41FFCP PHASE1:Hg19::chr8:57353666..57353675,-#_b925e42d318102f65f920bc966eec958p@chr8:57353666..57353675, -
6.62e-41FFCP PHASE2:Hg19::chr8:57354143..57354152,+#_b925e42d318102f65f920bc966eec958p@chr8:57354143..57354152, +
6.62e-41FFCP PHASE2:Hg19::chr8:57353779..57353790,-#_b925e42d318102f65f920bc966eec958p@chr8:57353779..57353790, -
6.62e-41FFCP PHASE2:Hg19::chr8:57353666..57353675,-#_b925e42d318102f65f920bc966eec958p@chr8:57353666..57353675, -
1.48e-40FFCP PHASE1:Hg19::chr20:49253452..49253461,-#_773cfe3fb0f6e35a26e9abb841160bbdp12@FAM65C
1.48e-40FFCP PHASE1:Hg19::chr1:6615391..6615401,+#_773cfe3fb0f6e35a26e9abb841160bbdp2@TAS1R1
1.48e-40FFCP PHASE2:Hg19::chr20:49253452..49253461,-#_773cfe3fb0f6e35a26e9abb841160bbdp12@FAM65C
1.48e-40FFCP PHASE1:Hg19::chr1:75600308..75600316,+#_773cfe3fb0f6e35a26e9abb841160bbdp8@LHX8
1.48e-40FFCP PHASE2:Hg19::chr1:6615391..6615401,+#_773cfe3fb0f6e35a26e9abb841160bbdp2@TAS1R1
1.48e-40FFCP PHASE2:Hg19::chr1:75600308..75600316,+#_773cfe3fb0f6e35a26e9abb841160bbdp8@LHX8
2.21e-40FFCP PHASE2:Hg19::chr16:67687543..67687559,-#_641b78cd341c5fb25bbea31a71c2f473p@chr16:67687543..67687559, -
2.21e-40FFCP PHASE1:Hg19::chr5:75912831..75912842,-#_641b78cd341c5fb25bbea31a71c2f473p@chr5:75912831..75912842, -
2.21e-40FFCP PHASE1:Hg19::chr16:67687543..67687559,-#_641b78cd341c5fb25bbea31a71c2f473p@chr16:67687543..67687559, -
2.21e-40FFCP PHASE2:Hg19::chr5:75912831..75912842,-#_641b78cd341c5fb25bbea31a71c2f473p@chr5:75912831..75912842, -
3.3e-40FFCP PHASE2:Hg19::chr6:46190219..46190230,-#_9de7d2e98c63c008777e34c313c3f2b4p@chr6:46190219..46190230, -
3.3e-40FFCP PHASE1:Hg19::chr9:125165007..125165016,+#_9de7d2e98c63c008777e34c313c3f2b4p@chr9:125165007..125165016, +
3.3e-40FFCP PHASE1:Hg19::chr6:46190219..46190230,-#_9de7d2e98c63c008777e34c313c3f2b4p@chr6:46190219..46190230, -
3.3e-40FFCP PHASE2:Hg19::chr9:125165007..125165016,+#_9de7d2e98c63c008777e34c313c3f2b4p@chr9:125165007..125165016, +
1.84e-34FFCP PHASE2:Hg19::chr8:57359557..57359570,-#_9bffa7ba47ce51ba958ea6c7210bb30ep5@PENK
1.84e-34FFCP PHASE1:Hg19::chr4:8594472..8594473,+#_9bffa7ba47ce51ba958ea6c7210bb30ep4@CPZ
1.84e-34FFCP PHASE1:Hg19::chr10:15760985..15760992,-#_9bffa7ba47ce51ba958ea6c7210bb30ep@chr10:15760985..15760992, -
1.84e-34FFCP PHASE2:Hg19::chr4:8594472..8594473,+#_9bffa7ba47ce51ba958ea6c7210bb30ep4@CPZ
1.84e-34FFCP PHASE1:Hg19::chr8:57359557..57359570,-#_9bffa7ba47ce51ba958ea6c7210bb30ep5@PENK
1.84e-34FFCP PHASE2:Hg19::chr10:15760985..15760992,-#_9bffa7ba47ce51ba958ea6c7210bb30ep@chr10:15760985..15760992, -
2.58e-34FFCP PHASE2:Hg19::chr14:61125018..61125037,-#_c36554ed17115c772a8754c4b195d3a5p9@SIX1
2.58e-34FFCP PHASE1:Hg19::chr14:61125018..61125037,-#_c36554ed17115c772a8754c4b195d3a5p9@SIX1
5.05e-34FFCP PHASE1:Hg19::chr6:134327986..134327991,-#_1ecd3b9a2b6029bff2b11248100f89a8p@chr6:134327986..134327991, -
5.05e-34FFCP PHASE2:Hg19::chr6:134327986..134327991,-#_1ecd3b9a2b6029bff2b11248100f89a8p@chr6:134327986..134327991, -
7.06e-34FFCP PHASE2:Hg19::chr8:57353676..57353688,-#_71eb1a94eed786d442ccadd881f41a3dp@chr8:57353676..57353688, -
7.06e-34FFCP PHASE1:Hg19::chr13:58291223..58291226,+#_71eb1a94eed786d442ccadd881f41a3dp@chr13:58291223..58291226, +
7.06e-34FFCP PHASE1:Hg19::chr8:57353676..57353688,-#_71eb1a94eed786d442ccadd881f41a3dp@chr8:57353676..57353688, -
7.06e-34FFCP PHASE2:Hg19::chr13:58291223..58291226,+#_71eb1a94eed786d442ccadd881f41a3dp@chr13:58291223..58291226, +
9.85e-34FFCP PHASE1:Hg19::chr5:127873659..127873667,-#_9c53a7c916f7a304cd0a1efcae505fc6p12@FBN2
9.85e-34FFCP PHASE1:Hg19::chr5:19721484..19721507,-#_9c53a7c916f7a304cd0a1efcae505fc6p@chr5:19721484..19721507, -
9.85e-34FFCP PHASE1:Hg19::chrX:133792540..133792551,-#_9c53a7c916f7a304cd0a1efcae505fc6p4@PLAC1
9.85e-34FFCP PHASE2:Hg19::chr5:127873659..127873667,-#_9c53a7c916f7a304cd0a1efcae505fc6p12@FBN2
9.85e-34FFCP PHASE2:Hg19::chr5:19721484..19721507,-#_9c53a7c916f7a304cd0a1efcae505fc6p@chr5:19721484..19721507, -
9.85e-34FFCP PHASE2:Hg19::chrX:133792540..133792551,-#_9c53a7c916f7a304cd0a1efcae505fc6p4@PLAC1
7.48e-30FFCP PHASE2:Hg19::chr8:57353982..57353991,-#_861b427fc322fcb2044e1f6004b5725cp@chr8:57353982..57353991, -
7.48e-30FFCP PHASE1:Hg19::chr8:57353804..57353821,-#_861b427fc322fcb2044e1f6004b5725cp@chr8:57353804..57353821, -
7.48e-30FFCP PHASE1:Hg19::chr8:57354360..57354367,+#_861b427fc322fcb2044e1f6004b5725cp@chr8:57354360..57354367, +
7.48e-30FFCP PHASE2:Hg19::chr8:57353804..57353821,-#_861b427fc322fcb2044e1f6004b5725cp@chr8:57353804..57353821, -
7.48e-30FFCP PHASE1:Hg19::chr8:57353982..57353991,-#_861b427fc322fcb2044e1f6004b5725cp@chr8:57353982..57353991, -
7.48e-30FFCP PHASE2:Hg19::chr8:57354360..57354367,+#_861b427fc322fcb2044e1f6004b5725cp@chr8:57354360..57354367, +
9.99e-30FFCP PHASE2:Hg19::chr10:15762107..15762114,-#_72d5cf876e7e4ce40d079b78dd5bd61ep10@ITGA8
9.99e-30FFCP PHASE1:Hg19::chr3:157824322..157824334,-#_72d5cf876e7e4ce40d079b78dd5bd61ep7@SHOX2
9.99e-30FFCP PHASE1:Hg19::chr10:15762107..15762114,-#_72d5cf876e7e4ce40d079b78dd5bd61ep10@ITGA8
9.99e-30FFCP PHASE2:Hg19::chr3:157824322..157824334,-#_72d5cf876e7e4ce40d079b78dd5bd61ep7@SHOX2
1.33e-29FFCP PHASE1:Hg19::chr22:28193943..28193956,-#_aeb211ae68959d74de935c9e925f8a39p@chr22:28193943..28193956, -
1.33e-29FFCP PHASE2:Hg19::chrX:132670143..132670152,-#_aeb211ae68959d74de935c9e925f8a39p@chrX:132670143..132670152, -
1.33e-29FFCP PHASE2:Hg19::chr17:79071218..79071221,-#_aeb211ae68959d74de935c9e925f8a39p@chr17:79071218..79071221, -
1.33e-29FFCP PHASE2:Hg19::chr22:28193943..28193956,-#_aeb211ae68959d74de935c9e925f8a39p@chr22:28193943..28193956, -
1.33e-29FFCP PHASE1:Hg19::chrX:132670143..132670152,-#_aeb211ae68959d74de935c9e925f8a39p@chrX:132670143..132670152, -
1.33e-29FFCP PHASE1:Hg19::chr17:79071218..79071221,-#_aeb211ae68959d74de935c9e925f8a39p@chr17:79071218..79071221, -
1.78e-29FFCP PHASE2:Hg19::chr1:21904551..21904569,-#_62f8257ea614ecb3435812bfc013db1ep@chr1:21904551..21904569, -
1.78e-29FFCP PHASE1:Hg19::chr1:21904551..21904569,-#_62f8257ea614ecb3435812bfc013db1ep@chr1:21904551..21904569, -
3.16e-29FFCP PHASE1:Hg19::chr8:57359975..57359992,-#_399e7ff6c0c1762a51742976a58d8b9dp@chr8:57359975..57359992, -
3.16e-29FFCP PHASE2:Hg19::chr1:156470861..156470868,-#_399e7ff6c0c1762a51742976a58d8b9dp18@MEF2D
3.16e-29FFCP PHASE2:Hg19::chr14:89044406..89044416,+#_399e7ff6c0c1762a51742976a58d8b9dp@chr14:89044406..89044416, +
3.16e-29FFCP PHASE2:Hg19::chr8:57359975..57359992,-#_399e7ff6c0c1762a51742976a58d8b9dp@chr8:57359975..57359992, -
3.16e-29FFCP PHASE1:Hg19::chr1:156470861..156470868,-#_399e7ff6c0c1762a51742976a58d8b9dp18@MEF2D
3.16e-29FFCP PHASE1:Hg19::chr14:89044406..89044416,+#_399e7ff6c0c1762a51742976a58d8b9dp@chr14:89044406..89044416, +
4.2e-29FFCP PHASE2:Hg19::chr13:36046127..36046134,+#_6792b09159627bc6e0b51d40ff48133cp@chr13:36046127..36046134, +
4.2e-29FFCP PHASE1:Hg19::chr15:52606315..52606320,-#_6792b09159627bc6e0b51d40ff48133cp@chr15:52606315..52606320, -

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