FFCP PHASE1:Hg19::chr12:53901266..53901269,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8620 | |EntrezGene=8620 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7901 | |HGNC=7901 | ||
|TSSclassifier=strong | |||
|UniProt=O15130 | |UniProt=O15130 | ||
|association_with_transcript=152bp_to_ENST00000267017,NM_003717,uc001sdw.1_5end | |association_with_transcript=152bp_to_ENST00000267017,NM_003717,uc001sdw.1_5end | ||
|cluster_id=chr12:53901266..53901269,- | |||
|coexpression_cluster_id=C39 | |coexpression_cluster_id=C39 | ||
|description=CAGE_peak_1_at_NPFF_5end | |description=CAGE_peak_1_at_NPFF_5end | ||
|id=chr12:53901266..53901269,- | |id=chr12:53901266..53901269,- | ||
|ontology_enrichment_celltype=CL:0000123;7.30e-14;2!CL:0000242;7.30e-14;2 | |ontology_enrichment_celltype=CL:0002322!1.25e-25!5;CL:0000242!1.18e-11!2 | ||
| | |ontology_enrichment_celltype_v019=CL:0000123;7.30e-14;2!CL:0000242;7.30e-14;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000242,7.30e-14,2 | |||
|ontology_enrichment_development_v019=UBERON:0007297;6.43e-14;2!UBERON:0009117;6.94e-11;10!UBERON:0005564;6.94e-11;10!UBERON:0006241;1.60e-09;3!UBERON:0003057;1.60e-09;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0003135;2.70e-36;11!UBERON:0006947;5.99e-34;3!UBERON:0004054;5.99e-34;3!UBERON:0001301;2.16e-26;1!UBERON:0001000;8.64e-26;1!UBERON:0005352;8.64e-26;1!UBERON:0005904;9.22e-26;4!UBERON:0003101;1.86e-18;22!UBERON:0000079;1.86e-18;22!UBERON:0000473;2.34e-13;8!UBERON:0000058;6.13e-11;10!UBERON:0002240;1.60e-09;3!UBERON:0005174;1.60e-09;3!UBERON:0001137;1.60e-09;3!UBERON:0003133;8.91e-07;44 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003135!5.67e-12!11;UBERON:0003076!8.16e-12!15;UBERON:0003057!8.16e-12!15;UBERON:0006947!3.07e-08!3;UBERON:0004054!3.07e-08!3;UBERON:0002240!6.57e-08!3;UBERON:0001896!1.34e-07!3;UBERON:0005290!1.34e-07!3;UBERON:0010096!1.34e-07!3;UBERON:0004733!5.74e-07!12;UBERON:0002028!5.74e-07!12;UBERON:0007277!5.74e-07!12;UBERON:0001301!7.49e-07!1;UBERON:0001000!9.30e-07!1;UBERON:0005352!9.30e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0003135;2.70e-36;11!UBERON:0006947;5.99e-34;3!UBERON:0004054;5.99e-34;3!UBERON:0001301;2.16e-26;1!UBERON:0001000;8.64e-26;1!UBERON:0005352;8.64e-26;1!UBERON:0005904;9.22e-26;4!UBERON:0003101;1.86e-18;22!UBERON:0000079;1.86e-18;22!UBERON:0000473;2.34e-13;8!UBERON:0000058;6.13e-11;10!UBERON:0002240;1.60e-09;3!UBERON:0005174;1.60e-09;3!UBERON:0001137;1.60e-09;3!UBERON:0003133;8.91e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,2.58e-36,11;UBERON:0006947,4.66e-34,3;UBERON:0004054,4.66e-34,3;UBERON:0001301,2.16e-26,1;UBERON:0001000,5.93e-26,1;UBERON:0005352,5.93e-26,1;UBERON:0005904,7.64e-26,4;UBERON:0003101,1.82e-18,22;UBERON:0000079,1.82e-18,22;UBERON:0000473,2.49e-13,8;UBERON:0002240,1.54e-09,3;UBERON:0005174,1.54e-09,3;UBERON:0001137,1.54e-09,3;UBERON:0003133,1.04e-08,48;UBERON:0000489,6.69e-08,31;UBERON:0005156,3.74e-07,59;UBERON:0000990,3.74e-07,59 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.609868530647977,0.265059536642971,0.69716365721711,0.310983165046111,0.504641701751257,1.09493207722749,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24330549367694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0.886642856860642,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97292201424695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,200.411488473609,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0.83088067605837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.683060432355218,0.138348634936231,0,0,0,0,0.468334905806882,3.4781046866598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619678821295011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316027223465453,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96308467114945,0.297046400327086,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0,0,2.8795905322931,1.07185652062471,0,0,0,0,0.193766729508018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.609868530647977,0.265059536642971,0.69716365721711,0.310983165046111,0.504641701751257,1.09493207722749,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24330549367694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0.886642856860642,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97292201424695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,200.411488473609,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0.83088067605837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.683060432355218,0.138348634936231,0,0,0,0,0.468334905806882,3.4781046866598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619678821295011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316027223465453,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96308467114945,0.297046400327086,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0,0,2.8795905322931,1.07185652062471,0,0,0,0,0.193766729508018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@NPFF | |short_description=p1@NPFF | ||
}} | }} |
Latest revision as of 03:31, 19 September 2015
Short description: | p1@NPFF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NPFF_5end |
Coexpression cluster: | C39_epididymis_ductus_seminal_testis_acute_thyroid_CD133 |
Association with transcript: | 152bp_to_ENST00000267017, NM_003717, uc001sdw.1_5end |
EntrezGene: | NPFF |
HGNC: | 7901 |
UniProt: | O15130 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 7.30e-14 | 2 |
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 2.58e-36 | 11 |
male genital duct | 4.66e-34 | 3 |
internal male genitalia | 4.66e-34 | 3 |
epididymis | 2.16e-26 | 1 |
vas deferens | 5.93e-26 | 1 |
spermatic cord | 5.93e-26 | 1 |
duct of male reproductive system | 7.64e-26 | 4 |
male organism | 1.82e-18 | 22 |
male reproductive system | 1.82e-18 | 22 |
testis | 2.49e-13 | 8 |
spinal cord | 1.54e-09 | 3 |
dorsal region element | 1.54e-09 | 3 |
dorsum | 1.54e-09 | 3 |
reproductive organ | 1.04e-08 | 48 |
cavitated compound organ | 6.69e-08 | 31 |
reproductive structure | 3.74e-07 | 59 |
reproductive system | 3.74e-07 | 59 |