FFCP PHASE1:Hg19::chr2:239778648..239778664,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:239778648..239778664,+ | |||
|description=CAGE_peak_at_chr2:239778648..239778664,+ | |description=CAGE_peak_at_chr2:239778648..239778664,+ | ||
|id=chr2:239778648..239778664,+ | |id=chr2:239778648..239778664,+ | ||
|ontology_enrichment_celltype=CL:0002620;3.05e-38;23!CL:0002574;1.03e-10;1!CL:0000057;5.66e-07;73!CL:0000197;6.67e-07;6!CL:0000098;6.67e-07;6!CL:0002167;6.67e-07;6 | |ontology_enrichment_celltype=CL:0002620!2.65e-19!23;CL:0000057!5.99e-15!75;CL:0000055!3.86e-07!180;CL:0002570!8.60e-07!8 | ||
| | |ontology_enrichment_celltype_v019=CL:0002620;3.05e-38;23!CL:0002574;1.03e-10;1!CL:0000057;5.66e-07;73!CL:0000197;6.67e-07;6!CL:0000098;6.67e-07;6!CL:0002167;6.67e-07;6 | ||
|ontology_enrichment_disease=DOID:17;8.83e-30;5!DOID:450;8.83e-30;5!DOID:66;8.83e-30;5!DOID:423;8.83e-30;5!DOID:0080000;8.83e-30;5!DOID:11722;8.83e-30;5 | |ontology_enrichment_celltype_v019_2=CL:0002620,2.23e-38,23;CL:0000057,3.97e-18,76;CL:0002574,9.84e-11,1;CL:0000197,7.75e-07,6;CL:0000098,7.75e-07,6;CL:0002167,7.75e-07,6 | ||
|ontology_enrichment_uberon=UBERON:0002199;2.57e-18;46!UBERON:0002416;2.57e-18;46!UBERON:0002097;6.12e-18;41!UBERON:0006947;6.16e-13;3!UBERON:0004054;6.16e-13;3!UBERON:0003102;2.73e-12;50!UBERON:0007029;7.75e-11;1!UBERON:0001000;2.50e-10;1!UBERON:0000998;2.50e-10;1!UBERON:0006868;2.50e-10;1!UBERON:0005352;2.50e-10;1!UBERON:0005904;6.24e-10;4 | |ontology_enrichment_development_v019=UBERON:0005754;2.50e-10;1 | ||
|ontology_enrichment_disease=DOID:17!8.83e-08!5;DOID:450!8.83e-08!5;DOID:66!8.83e-08!5;DOID:423!8.83e-08!5;DOID:0080000!8.83e-08!5;DOID:11722!8.83e-08!5 | |||
|ontology_enrichment_disease_v019=DOID:17;8.83e-30;5!DOID:450;8.83e-30;5!DOID:66;8.83e-30;5!DOID:423;8.83e-30;5!DOID:0080000;8.83e-30;5!DOID:11722;8.83e-30;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,6.36e-30,5;DOID:450,6.36e-30,5;DOID:66,6.36e-30,5;DOID:423,6.36e-30,5;DOID:0080000,6.36e-30,5;DOID:11722,6.36e-30,5 | |||
|ontology_enrichment_uberon=UBERON:0003102!4.77e-13!95;UBERON:0002199!4.40e-12!45;UBERON:0002416!4.40e-12!45;UBERON:0002097!3.29e-11!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0002199;2.57e-18;46!UBERON:0002416;2.57e-18;46!UBERON:0002097;6.12e-18;41!UBERON:0006947;6.16e-13;3!UBERON:0004054;6.16e-13;3!UBERON:0003102;2.73e-12;50!UBERON:0007029;7.75e-11;1!UBERON:0001000;2.50e-10;1!UBERON:0000998;2.50e-10;1!UBERON:0006868;2.50e-10;1!UBERON:0005352;2.50e-10;1!UBERON:0005904;6.24e-10;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.95e-25,41;UBERON:0002199,1.73e-22,46;UBERON:0002416,1.73e-22,46;UBERON:0006947,5.81e-13,3;UBERON:0004054,5.81e-13,3;UBERON:0003102,2.17e-11,99;UBERON:0007029,7.40e-11,1;UBERON:0000998,2.28e-10,1;UBERON:0006868,2.28e-10,1;UBERON:0001000,2.50e-10,1;UBERON:0005352,2.50e-10,1;UBERON:0005904,5.97e-10,4 | |||
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|short_description=p@chr2:239778648..239778664,+ | |short_description=p@chr2:239778648..239778664,+ | ||
}} | }} |
Latest revision as of 08:22, 29 July 2015
Short description: | p@chr2:239778648..239778664, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:239778648..239778664, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.23e-38 | 23 |
fibroblast | 3.97e-18 | 76 |
stromal cell of pancreas | 9.84e-11 | 1 |
receptor cell | 7.75e-07 | 6 |
sensory epithelial cell | 7.75e-07 | 6 |
olfactory epithelial cell | 7.75e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
skin of body | 1.95e-25 | 41 |
integument | 1.73e-22 | 46 |
integumental system | 1.73e-22 | 46 |
male genital duct | 5.81e-13 | 3 |
internal male genitalia | 5.81e-13 | 3 |
surface structure | 2.17e-11 | 99 |
surface | 7.40e-11 | 1 |
seminal vesicle | 2.28e-10 | 1 |
seminal fluid secreting gland | 2.28e-10 | 1 |
vas deferens | 2.50e-10 | 1 |
spermatic cord | 2.50e-10 | 1 |
duct of male reproductive system | 5.97e-10 | 4 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 6.36e-30 | 5 |
myotonic disease | 6.36e-30 | 5 |
muscle tissue disease | 6.36e-30 | 5 |
myopathy | 6.36e-30 | 5 |
muscular disease | 6.36e-30 | 5 |
myotonic dystrophy | 6.36e-30 | 5 |