FFCP PHASE1:Hg19::chr17:7462268..7462279,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8741 | |EntrezGene=8741 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11928 | |HGNC=11928 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=164bp_to_ENST00000396545_5end | |association_with_transcript=164bp_to_ENST00000396545_5end | ||
|cluster_id=chr17:7462268..7462279,+ | |||
|coexpression_cluster_id=C294 | |coexpression_cluster_id=C294 | ||
|description=CAGE_peak_7_at_TNFSF13_5end | |description=CAGE_peak_7_at_TNFSF13_5end | ||
|id=chr17:7462268..7462279,+ | |id=chr17:7462268..7462279,+ | ||
|ontology_enrichment_celltype=CL:0000473;3.05e-37;39!CL:0000234;3.05e-37;39!CL:0000576;6.35e-34;48!CL:0000860;1.25e-32;33!CL:0002057;1.25e-32;33!CL:0000766;2.39e-28;69!CL:0000763;1.63e-15;100!CL:0000235;2.00e-12;6!CL:0002393;1.10e-11;6!CL:0002397;1.10e-11;6!CL:0000738;1.78e-10;136!CL:0002087;3.65e-10;104!CL:0000094;3.23e-08;8!CL:0000988;3.74e-07;177!CL:0002619;6.66e-07;3!CL:0000875;8.57e-07;3!CL:0002396;8.57e-07;3 | |ontology_enrichment_celltype=CL:0000766!2.46e-43!76;CL:0002194!3.22e-43!63;CL:0000576!3.22e-43!63;CL:0000040!3.22e-43!63;CL:0000559!3.22e-43!63;CL:0002009!1.16e-42!65;CL:0000763!1.00e-39!112;CL:0000049!1.00e-39!112;CL:0000839!6.95e-39!70;CL:0000557!4.58e-38!71;CL:0002057!4.13e-36!42;CL:0000860!1.84e-32!45;CL:0000037!1.42e-31!172;CL:0000566!1.42e-31!172;CL:0000738!3.83e-29!140;CL:0002032!3.60e-28!165;CL:0000837!3.60e-28!165;CL:0000988!7.62e-28!182;CL:0002087!8.74e-27!119;CL:0002031!1.34e-23!124;CL:0002393!1.63e-10!9;CL:0002397!1.63e-10!9 | ||
| | |ontology_enrichment_celltype_v019=CL:0000473;3.05e-37;39!CL:0000234;3.05e-37;39!CL:0000576;6.35e-34;48!CL:0000860;1.25e-32;33!CL:0002057;1.25e-32;33!CL:0000766;2.39e-28;69!CL:0000763;1.63e-15;100!CL:0000235;2.00e-12;6!CL:0002393;1.10e-11;6!CL:0002397;1.10e-11;6!CL:0000738;1.78e-10;136!CL:0002087;3.65e-10;104!CL:0000094;3.23e-08;8!CL:0000988;3.74e-07;177!CL:0002619;6.66e-07;3!CL:0000875;8.57e-07;3!CL:0002396;8.57e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000766,7.74e-67,72;CL:0002194,9.90e-66,59;CL:0000576,9.90e-66,59;CL:0000040,9.90e-66,59;CL:0000559,9.90e-66,59;CL:0002009,4.75e-63,61;CL:0000473,4.83e-62,48;CL:0000234,4.83e-62,48;CL:0000839,4.72e-57,66;CL:0000557,5.84e-56,67;CL:0000763,1.04e-52,108;CL:0000049,1.04e-52,108;CL:0000860,4.58e-51,42;CL:0002057,4.58e-51,42;CL:0000738,6.73e-45,136;CL:0000037,4.52e-43,168;CL:0002087,9.34e-42,115;CL:0000988,1.02e-39,177;CL:0002032,1.62e-38,161;CL:0000837,1.62e-38,161;CL:0002031,2.53e-34,120;CL:0002393,7.12e-17,9;CL:0002397,7.12e-17,9;CL:0000235,2.02e-12,6;CL:0000134,9.18e-10,354;CL:0002320,3.33e-09,361;CL:0000094,2.83e-08,8;CL:0000219,2.79e-07,386;CL:0002619,6.71e-07,3;CL:0000875,8.38e-07,3;CL:0002396,8.38e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.84e-36;42!CL:0000049;1.32e-15;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000178;1.35e-12;15!UBERON:0000179;1.35e-12;15!UBERON:0000463;1.35e-12;15 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.32e-47!115;UBERON:0002390!4.82e-40!102;UBERON:0003061!4.82e-40!102;UBERON:0002193!3.16e-36!112;UBERON:0002371!3.36e-32!80;UBERON:0001474!2.85e-28!86;UBERON:0004765!3.74e-23!101;UBERON:0001434!3.74e-23!101;UBERON:0002405!6.16e-21!115;UBERON:0003081!1.01e-11!216;UBERON:0001049!6.26e-10!57;UBERON:0005068!6.26e-10!57;UBERON:0006241!6.26e-10!57;UBERON:0007135!6.26e-10!57;UBERON:0000178!1.73e-08!15;UBERON:0000179!1.73e-08!15;UBERON:0000463!1.73e-08!15;UBERON:0002204!2.61e-08!167;UBERON:0002780!5.45e-08!41;UBERON:0001890!5.45e-08!41;UBERON:0006240!5.45e-08!41;UBERON:0000479!1.20e-07!787;UBERON:0003080!1.27e-07!42;UBERON:0002616!1.84e-07!59;UBERON:0002020!4.51e-07!34;UBERON:0003528!4.51e-07!34;UBERON:0001893!4.61e-07!34;UBERON:0003075!7.02e-07!86;UBERON:0007284!7.02e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.35e-12;15!UBERON:0000179;1.35e-12;15!UBERON:0000463;1.35e-12;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.82e-56,98;UBERON:0003061,3.82e-56,98;UBERON:0002193,3.95e-51,108;UBERON:0002371,2.03e-47,76;UBERON:0001474,9.07e-43,82;UBERON:0002405,2.65e-39,93;UBERON:0004765,1.54e-37,90;UBERON:0001434,3.45e-32,100;UBERON:0003081,1.13e-21,203;UBERON:0002204,2.93e-13,167;UBERON:0007023,3.30e-13,114;UBERON:0000178,1.32e-12,15;UBERON:0000179,1.32e-12,15;UBERON:0000463,1.32e-12,15;UBERON:0000926,1.52e-09,315;UBERON:0004120,1.52e-09,315;UBERON:0006603,1.52e-09,315;UBERON:0002384,6.93e-09,371 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.4407426443737,2.68680578668049,7.7408061658038,0,0.30120591877825,0,0,0,0.587200878669695,3.87796785972314,6.21687787157439,7.59538047505481,21.7198010012727,15.546895968911,15.196958490417,2.90796477559129,1.88937971844405,3.15359279544161,2.78914844286822,2.05583944010913,2.16794459626573,2.8769239232215,3.84241059793651,3.78371567821736,3.44745680736619,1.93645405075148,2.70852973188684,1.88242339542605,3.27487380069415,2.02251136000576,3.06083892370903,1.28371610830437,2.55734850319616,2.30895910130701,2.99195486432448,2.98357325372886,2.03146467040009,1.70215567407342,0.622822248995575,2.51248665256743,3.12889751052121,2.17188844705117,0.605399502633369,0.736555271975129,0.949387162322653,16.9004229049553,17.0083439972035,17.6113262227036,15.0520365736303,20.1237036407618,11.4115166554927,14.5356499308037,15.9133341759272,14.7957964549353,1.75996244461323,1.63841583378639,1.77901850772711,1.70692089026603,1.20118796110804,0.574752439954483,1.32208974556972,0,0,0,0,1.32171328579026,1.68152568894461,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20460095262218,0.127986611154418,2.49861453104692,0.710331756132051,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,0,0.486634870302636,0,0,0,0.654895377488563,0,0,1.9472843619281,2.61194605948901,5.58423434179234,1.66943437013739,1.14398982156026,2.60020250930695,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,28.5611727061381,12.1682217872404,29.7262324577456,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.0546585795333,31.1399396687918,23.1917333431335,0,0,0,0,0,0,0,0.394061520403854,0,0.513372145118994,0,0,0,0.167516265334349,0,5.99205619157746,20.9413021442817,6.63064821497657,0.12269149171914,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,4.13536052245775,5.60856922128404,4.69601254335155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.522870902049801,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.844430541190656,0,0,0,0.0962221127255121,0.670302275535787,0,0.847294206991012,0,0,0,0,6.08937131078603,4.58782324285425,7.40541343326411,5.71756261098694,4.11362273086194,0.648473311192717,5.94034580961926,1.58625035258854,0,0,0,0,0.144269212976445,0,0,0.399158742865633,4.21311814291207,0.211673582723883,0,1.40398589056729,0.228234679033192,0.47003968731907,0,0.338583555603207,2.08764497634809,3.22879531505676,1.27753871307098,5.839590860848,0.307240764308458,0.894704431569664,0.500547425135725,6.05703095746325,0,0,0,0,0,0,1.31857361344705,0,0,0,0,0,0,0,1.54736358051564,0,0,0,0.796991953004279,0.552567831062295,0,0,0,0,0,0,1.02314474045374,0.591860433821602,2.3948309234694,0,0.969332746095218,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0,1.4471572635049,0,0.221158519862449,0.295547618953547,1.09692698576986,0,0,0.923403102045565,0,0,0,0,0.31900115973192,0.183195186803725,1.5991043280559,0,0.470940769185074,0.166211681900156,0,0,0,0,0,0,0,0,0,0.995261931078505,0.796118080530053,0,0,0,0,0.471807930864739,0,0.468528891450678,0,0,0,1.18375320854817,0,0,7.26645665727612,0,0,0,0,0,0,0.284609546029793,0,0,0,0,1.7472666824203,0,0,0,0,0.193978032976839,0,0.90392296312213,0,0,0.759729551470544,0,0,1.06726497369676,0,0,0,0,0,0,0.235694034616795,0,0,0,0,3.00210144354895,0.958337652243951,0,0,0,0.558564802544508,0.229160424011684,0.717873024576814,0.199679000498991,0,0.669514372325618,0.335917362433631,0,0,0,0,0,0,0,0.795229689809303,1.0896272488926,0,0,0,0.674921674654501,0,0.789744236554321,0,1.41850273138557,0.314727528809989,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0.113312091520126,0.146552233678082,0,0.258565912723101,1.19009341568421,0,0.704815022316672,2.45611048905698,1.57204305099666,3.72815149812476,4.46549419630756,0,0,0,0,0.2506898940227,0.306345576763462,0.655745261419609,0,0,0.488105059607853,0.250381861413,1.14681839138014,1.44207766997908,0.869349641179368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10606748921385,0,0,0.163565394255844,0,0,0,0,0.320075189082423,0,0,0,0,0.622077260032973,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0.321146125482298,0,1.27707087245721,0.41023272848151,0,0.96820153449905,0.645902582527404,0,0,0,0,0,0,0,0,0.676892955143315,0,1.56302802246618,0,0,0,0.742913430802341,0.781078098613847,0.826747186004736,0.697573912132975,0,3.83780436800028,2.97726707033577,0,0,0.535701835878287,0.336283722218824,0,0.682986574053893,0.620916591138472,0,0,0.135939465953663,0.789273282754189,0,0,1.88383422841234,1.25692471932802,0,0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| ||
|short_description=p7@TNFSF13 | |short_description=p7@TNFSF13 | ||
}} | }} |
Latest revision as of 16:17, 17 September 2015
Short description: | p7@TNFSF13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_TNFSF13_5end |
Coexpression cluster: | C294_CD14_Macrophage_Monocytederived_CD14CD16_Neutrophils_Basophils_Peripheral |
Association with transcript: | 164bp_to_ENST00000396545_5end |
EntrezGene: | TNFSF13 |
HGNC: | 11928 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.82e-56 | 98 |
blood island | 3.82e-56 | 98 |
hemolymphoid system | 3.95e-51 | 108 |
bone marrow | 2.03e-47 | 76 |
bone element | 9.07e-43 | 82 |
immune system | 2.65e-39 | 93 |
skeletal element | 1.54e-37 | 90 |
skeletal system | 3.45e-32 | 100 |
lateral plate mesoderm | 1.13e-21 | 203 |
musculoskeletal system | 2.93e-13 | 167 |
adult organism | 3.30e-13 | 114 |
blood | 1.32e-12 | 15 |
haemolymphatic fluid | 1.32e-12 | 15 |
organism substance | 1.32e-12 | 15 |
mesoderm | 1.52e-09 | 315 |
mesoderm-derived structure | 1.52e-09 | 315 |
presumptive mesoderm | 1.52e-09 | 315 |
connective tissue | 6.93e-09 | 371 |