FFCP PHASE1:Hg19::chr1:1310530..1310603,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:1310530..1310603,-
|short_description=p1@AURKAIP1
|description=CAGE_peak_1_at_AURKAIP1_5end
|association_with_transcript=0bp_to_ENST00000321751,ENST0000033...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54998 | |EntrezGene=54998 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24114 | |HGNC=24114 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NWT8 | |UniProt=Q9NWT8 | ||
|association_with_transcript=0bp_to_ENST00000321751,ENST00000338370,ENST00000378853,ENST00000470457,ENST00000496905,NM_001127229,NM_001127230,uc001afd.2,uc009vkb.1_5end | |||
|cluster_id=chr1:1310530..1310603,- | |||
|coexpression_cluster_id=C534 | |||
|description=CAGE_peak_1_at_AURKAIP1_5end | |||
|id=chr1:1310530..1310603,- | |||
|ontology_enrichment_celltype=CL:0002321!1.01e-26!248;CL:0000220!4.47e-26!246;CL:0000066!3.93e-19!254;CL:0000548!9.87e-19!679;CL:0000004!9.87e-19!679;CL:0000255!9.87e-19!679;CL:0000012!1.00e-17!682;CL:0000222!1.50e-17!119;CL:0000183!3.17e-17!59;CL:0000055!7.64e-17!180;CL:0000393!1.91e-15!60;CL:0000211!1.91e-15!60;CL:0000187!1.01e-14!54;CL:0000680!1.86e-14!57;CL:0000056!1.86e-14!57;CL:0000355!1.86e-14!57;CL:0000192!1.11e-13!42;CL:0000514!1.11e-13!42;CL:0000144!1.39e-12!625;CL:0000359!6.26e-11!32;CL:0002371!7.82e-11!591;CL:1000449!4.07e-08!16;CL:1000497!1.19e-07!18;CL:0002518!1.19e-07!18;CL:0002681!5.20e-07!13;CL:0002584!5.20e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.78e-10;32!CL:0000192;1.24e-09;43!CL:1000449;1.39e-08;15!CL:0000187;2.37e-08;55!CL:1000497;5.15e-08;17!CL:0002518;5.15e-08;17!CL:0000393;1.07e-07;61!CL:0000211;1.07e-07;61!CL:0002681;1.70e-07;12!CL:0002584;1.70e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,5.12e-27,250;CL:0000066,3.40e-19,253;CL:0000222,9.19e-18,121;CL:0000393,3.32e-15,61;CL:0000211,3.32e-15,61;CL:0000187,1.82e-14,55;CL:0000680,3.20e-14,58;CL:0000056,3.20e-14,58;CL:0000355,3.20e-14,58;CL:0000192,2.22e-13,43;CL:0000514,2.22e-13,43;CL:0000359,6.26e-11,32;CL:1000449,1.38e-08,15;CL:1000497,4.87e-08,17;CL:0002518,4.87e-08,17;CL:0002681,1.68e-07,12;CL:0002584,1.68e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000514;1.24e-09;43!CL:0000355;7.93e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!3.01e-22!143;UBERON:0003104!4.27e-21!238;UBERON:0009142!4.27e-21!238;UBERON:0002100!2.29e-19!216;UBERON:0004290!1.58e-18!70;UBERON:0000486!1.65e-18!82;UBERON:0000914!1.96e-18!83;UBERON:0002329!1.96e-18!83;UBERON:0003077!1.96e-18!83;UBERON:0003059!1.96e-18!83;UBERON:0007282!1.96e-18!83;UBERON:0009618!1.96e-18!83;UBERON:0007285!1.96e-18!83;UBERON:0003914!6.38e-18!118;UBERON:0000490!7.33e-17!138;UBERON:0001134!3.11e-15!61;UBERON:0002036!3.11e-15!61;UBERON:0003082!3.11e-15!61;UBERON:0000481!6.13e-15!347;UBERON:0002385!2.81e-14!63;UBERON:0001015!2.81e-14!63;UBERON:0000383!2.81e-14!63;UBERON:0000119!4.49e-14!312;UBERON:0000483!7.07e-14!309;UBERON:0004872!2.28e-12!84;UBERON:0002049!6.75e-12!79;UBERON:0007798!6.75e-12!79;UBERON:0001981!1.38e-11!60;UBERON:0007500!1.38e-11!60;UBERON:0004537!1.38e-11!60;UBERON:0006965!1.38e-11!60;UBERON:0001637!2.49e-11!42;UBERON:0003509!2.49e-11!42;UBERON:0004572!2.49e-11!42;UBERON:0000055!1.83e-10!69;UBERON:0000475!1.20e-09!365;UBERON:0000926!1.07e-08!448;UBERON:0004120!1.07e-08!448;UBERON:0006603!1.07e-08!448;UBERON:0003103!1.91e-08!69;UBERON:0004211!4.07e-08!16;UBERON:0001285!4.07e-08!16;UBERON:0007684!4.07e-08!16;UBERON:0003220!4.07e-08!16;UBERON:0004208!4.07e-08!16;UBERON:0001009!8.21e-08!113;UBERON:0004573!1.26e-07!33;UBERON:0004571!1.26e-07!33;UBERON:0009569!1.47e-07!113;UBERON:0006555!3.03e-07!17;UBERON:0005103!3.03e-07!17;UBERON:0000083!3.03e-07!17;UBERON:0009201!3.03e-07!17;UBERON:0004819!3.03e-07!17;UBERON:0006553!3.03e-07!17;UBERON:0003074!3.03e-07!17;UBERON:0003060!3.03e-07!17;UBERON:0001225!5.20e-07!13;UBERON:0008987!5.20e-07!13;UBERON:0004535!5.38e-07!110;UBERON:0001048!7.43e-07!168 | |||
|ontology_enrichment_uberon_v019=UBERON:0003914;7.40e-09;74!UBERON:0006555;1.39e-08;15!UBERON:0004819;1.39e-08;15!UBERON:0001285;1.39e-08;15!UBERON:0007684;1.39e-08;15!UBERON:0001637;5.24e-08;42!UBERON:0003509;5.24e-08;42!UBERON:0004572;5.24e-08;42!UBERON:0000353;1.15e-07;15!UBERON:0007500;1.22e-07;56!UBERON:0001981;1.22e-07;56!UBERON:0004537;1.22e-07;56!UBERON:0001225;1.70e-07;12!UBERON:0008987;1.70e-07;12!UBERON:0006554;2.49e-07;30!UBERON:0001008;2.49e-07;30!UBERON:0002113;5.97e-07;24!UBERON:0011143;5.97e-07;24!UBERON:0004573;7.50e-07;33!UBERON:0004571;7.50e-07;33 | |||
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3901524861 | ||
|short_description=p1@AURKAIP1 | |||
}} | }} |
Latest revision as of 15:07, 16 September 2015
Short description: | p1@AURKAIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AURKAIP1_5end |
Coexpression cluster: | C534_Mesenchymal_Alveolar_Renal_Placental_Fibroblast_Smooth_Tracheal |
Association with transcript: | 0bp_to_ENST00000321751, ENST00000338370, ENST00000378853, ENST00000470457, ENST00000496905, NM_001127229, NM_001127230, uc001afd.2, uc009vkb.1_5end |
EntrezGene: | AURKAIP1 |
HGNC: | 24114 |
UniProt: | Q9NWT8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 5.12e-27 | 250 |
epithelial cell | 3.40e-19 | 253 |
mesodermal cell | 9.19e-18 | 121 |
electrically responsive cell | 3.32e-15 | 61 |
electrically active cell | 3.32e-15 | 61 |
muscle cell | 1.82e-14 | 55 |
muscle precursor cell | 3.20e-14 | 58 |
myoblast | 3.20e-14 | 58 |
multi-potent skeletal muscle stem cell | 3.20e-14 | 58 |
smooth muscle cell | 2.22e-13 | 43 |
smooth muscle myoblast | 2.22e-13 | 43 |
vascular associated smooth muscle cell | 6.26e-11 | 32 |
epithelial cell of nephron | 1.38e-08 | 15 |
kidney cell | 4.87e-08 | 17 |
kidney epithelial cell | 4.87e-08 | 17 |
kidney cortical cell | 1.68e-07 | 12 |
renal cortical epithelial cell | 1.68e-07 | 12 |