FFCP PHASE1:Hg19::chr1:101702307..101702329,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1901 | |EntrezGene=1901 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3165 | |HGNC=3165 | ||
|TSSclassifier=strong | |||
|UniProt=P21453 | |UniProt=P21453 | ||
|association_with_transcript=2bp_to_NM_001400,uc001dud.2_5end | |association_with_transcript=2bp_to_NM_001400,uc001dud.2_5end | ||
|cluster_id=chr1:101702307..101702329,+ | |||
|coexpression_cluster_id=C18 | |coexpression_cluster_id=C18 | ||
|description=CAGE_peak_4_at_S1PR1_5end | |description=CAGE_peak_4_at_S1PR1_5end | ||
|id=chr1:101702307..101702329,+ | |id=chr1:101702307..101702329,+ | ||
|ontology_enrichment_celltype=CL:0000084;7.29e-17;25!CL:0000791;4.27e-15;18!CL:0000789;4.27e-15;18!CL:0002419;4.27e-15;18!CL:0000542;1.19e-12;53!CL:0002139;3.75e-12;24!CL:0000115;2.71e-11;36!CL:0000625;6.26e-11;11!CL:0000071;5.48e-09;18!CL:0000236;1.38e-07;13!CL:0002078;2.62e-07;45!CL:0000624;3.77e-07;6 | |ontology_enrichment_celltype=CL:0000542!4.55e-16!53;CL:0000051!4.55e-16!53;CL:0000838!6.11e-16!52;CL:0000084!2.34e-12!25;CL:0000827!2.34e-12!25;CL:0000791!1.94e-11!18;CL:0000789!1.94e-11!18;CL:0002420!1.94e-11!18;CL:0002419!1.94e-11!18;CL:0000790!1.94e-11!18;CL:0000115!2.48e-10!35;CL:0002139!1.99e-09!24;CL:0000625!1.23e-08!11;CL:0002087!6.45e-08!119;CL:0000738!8.84e-08!140;CL:0002078!1.19e-07!44;CL:0000071!3.57e-07!18;CL:0002546!3.57e-07!18;CL:0000236!6.82e-07!14 | ||
| | |ontology_enrichment_celltype_v019=CL:0000084;7.29e-17;25!CL:0000791;4.27e-15;18!CL:0000789;4.27e-15;18!CL:0002419;4.27e-15;18!CL:0000542;1.19e-12;53!CL:0002139;3.75e-12;24!CL:0000115;2.71e-11;36!CL:0000625;6.26e-11;11!CL:0000071;5.48e-09;18!CL:0000236;1.38e-07;13!CL:0002078;2.62e-07;45!CL:0000624;3.77e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000542,4.13e-21,53;CL:0000051,4.13e-21,53;CL:0000838,6.08e-21,52;CL:0000084,1.24e-16,25;CL:0000827,1.24e-16,25;CL:0000791,4.67e-15,18;CL:0000789,4.67e-15,18;CL:0002420,4.67e-15,18;CL:0002419,4.67e-15,18;CL:0000790,4.67e-15,18;CL:0000115,2.80e-13,36;CL:0002139,6.03e-12,24;CL:0000625,6.63e-11,11;CL:0002078,9.03e-11,45;CL:0000738,5.32e-10,136;CL:0000071,5.61e-09,18;CL:0002546,5.61e-09,18;CL:0002087,6.24e-09,115;CL:0000236,4.06e-08,14;CL:0000624,3.94e-07,6;CL:0000213,6.83e-07,58;CL:0000215,6.83e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000790;4.27e-15;18!CL:0000051;1.19e-12;53!CL:0002546;5.48e-09;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000178;1.71e-12;15!UBERON:0000179;1.71e-12;15!UBERON:0000463;1.71e-12;15!UBERON:0004638;5.48e-09;18!UBERON:0001986;5.48e-09;18!UBERON:0004852;5.48e-09;18!UBERON:0002193;1.18e-07;42!UBERON:0002390;2.58e-07;32 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.48e-18!115;UBERON:0001009!2.48e-10!113;UBERON:0000178!6.61e-10!15;UBERON:0000179!6.61e-10!15;UBERON:0000463!6.61e-10!15;UBERON:0004535!7.71e-10!110;UBERON:0001049!3.76e-08!57;UBERON:0005068!3.76e-08!57;UBERON:0006241!3.76e-08!57;UBERON:0007135!3.76e-08!57;UBERON:0001986!3.57e-07!18;UBERON:0004638!3.57e-07!18;UBERON:0004852!3.57e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.71e-12;15!UBERON:0000179;1.71e-12;15!UBERON:0000463;1.71e-12;15!UBERON:0004638;5.48e-09;18!UBERON:0001986;5.48e-09;18!UBERON:0004852;5.48e-09;18!UBERON:0002193;1.18e-07;42!UBERON:0002390;2.58e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.02e-18,114;UBERON:0000178,1.41e-12,15;UBERON:0000179,1.41e-12,15;UBERON:0000463,1.41e-12,15;UBERON:0001049,1.16e-10,56;UBERON:0005068,1.16e-10,56;UBERON:0006241,1.16e-10,56;UBERON:0007135,1.16e-10,56;UBERON:0000073,1.29e-09,53;UBERON:0002616,1.29e-09,53;UBERON:0004638,5.61e-09,18;UBERON:0001986,5.61e-09,18;UBERON:0004852,5.61e-09,18;UBERON:0003528,1.90e-07,34;UBERON:0002020,1.90e-07,34;UBERON:0002780,2.75e-07,41;UBERON:0001890,2.75e-07,41;UBERON:0003080,2.75e-07,41;UBERON:0006240,2.75e-07,41;UBERON:0001893,3.82e-07,34;UBERON:0003075,4.23e-07,82;UBERON:0007284,4.23e-07,82 | |||
|phase1_expression=0,0,0.422863212287913,0,0,0,0,0,0.261185628199839,0,0,0,0.263766978228454,2.72285976512103,0.662794751455832,0.672325146451775,0.602694528023977,0.730310090387373,0.487932798790507,0,0,0,0,0,0.125542639594803,0.534893840235659,0.0821005894499457,0,21.6350352266897,11.8987113410136,4.18003532953405,0,0,0,0,0,0,3.32397245119126,6.81851121398482,7.59538047505481,1.34349284543955,1.94336199611388,1.54545340580512,3.05336301437086,0.755751887377619,2.66842467306598,0.464858073811369,0.822335776043652,0,0.575384784644301,0.256160706529101,0.709446689665756,0,0.645484683583826,0,0.564727018627814,0.272906150057846,0.449446968890169,0.612167784741805,1.28371610830437,0,1.31940520074686,1.79517291859469,0.426224750532694,0.870627715885752,1.13477044938228,0,1.00499466102697,1.0429658368404,0.434377689410233,0.605399502633369,0.368277635987565,0.316462387440884,0,0,0,0.112328631146495,0,0,0,0,0,1.75996244461323,14.7457425040775,8.00558328477199,8.10787422876364,19.6194033647646,10.3455439191807,15.8650769468367,13.3567525634951,10.2458334439701,23.4894875748376,15.2909291250092,2.64342657158052,2.80254281490768,0,36.1945977009453,33.0129040709298,32.690638340922,14.2108521082076,33.2440711966262,30.3006595670229,19.4826728407911,10.6954038609767,15.3195071886915,17.5011776721061,14.3526047795458,9.60684897942564,9.10415432919148,7.23526780256175,8.0141505157896,11.012517257932,41.0753779958907,37.7232567606495,50.1770514263889,11.2176249270591,29.5079780073479,28.1774505295757,22.7717722817553,16.8839669591771,12.370585623272,10.4549724889321,13.250610478844,18.9420184508539,19.9889162483753,21.0731754319175,13.9591759476578,17.338179917327,15.7789715512269,21.578836178537,0,0,0.255725123687061,0,0,0.434539556882471,0,0.486634870302636,0.378139268656271,0.221729397462564,0.614843499851882,1.63723844372141,0,0,0.649094787309367,0.348259474598534,0,0,0,1.11437250398869,2.18638648103376,1.72046919021225,2.08284300964557,5.08777147731609,3.35599548967925,3.30141650328081,2.50793959844173,2.06733407335463,2.13459757612026,3.01248551488203,4.43112248820062,5.32190474002959,4.63717909341522,1.83831540172934,3.24056779152704,2.23249320710199,2.02076435363553,2.47745257063309,1.53316637465883,2.84779697870439,1.28241220751285,3.9534125230819,0,0,0,0,0,1.14734648299525,0.709336764396714,0.560677600142307,0,0.49333509683432,0.311211035399766,0.134710672069688,0.490385709340376,0,0.576175924479999,0.234321431833797,0,0,0,0.117434498643765,0.161872944368132,0,0,0.245668634623536,0.103325781175765,0,0,0,0,0,0.375355559615893,0.554128230968366,0.438977620880838,0.30648779579902,0,1.02088964844019,0.179389635688862,0.213557388818567,0.635795703478686,1.20036438433761,0.618315175430633,0.772921620136887,0.18611685633159,2.36286865137773,1.46155507741798,0.757301322732344,1.47279837827679,0,0.710019185033229,0.201504196455281,0.169560592310488,0.966304265816484,0,0.286804595389004,0.121973706129595,0,0.232387885739037,0.10366105501537,0,0,0,0.643240938192885,0,1.85747171212792,2.88751792667834,0,0,0,0,0,0,0,0,0,3.69077727312324,2.80483547606892,0.4115740113314,0,0,3.9313088667105,0.590789906681404,0,0,0.171567810298526,0,0,0.502644862058154,0.0925884451585296,0.325808305310325,0,0,0.695582429850461,0.117408694235822,4.04226053731007,5.55582615091933,4.56609965363036,0,0,0.738651018262192,0,0.445893486866185,0,0,0,1.88072897675981,0,0,0,0,0,0,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0.258543431515556,3.57656445851882,0,1.59562869950922,3.12022310734098,0,2.83698264046557,0.799266537048298,0.285955987316295,0,3.29296134712308,0.977208552881205,0.710783897485092,1.58390374586686,0,0,0.299918973546171,1.2162378064119,0,0,0,0,1.42636905040718,0,1.43833425785268,0.537182889719687,0,16.156522336558,16.6033232641828,14.6311061358913,1.01637849688985,0,0.773288812777695,0.167516265334349,0,0,5.9832291840805,1.24324654030811,7.60687248658667,3.50119364741774,0.542530047399471,0.207970861530807,0,0.157702415033935,0,0,0,0,0.664225598535437,1.29058417979192,0.173767228936166,0.195801157462741,0,14.4737618286021,11.6485668442053,17.9302297109786,0,0,0.30239029332968,0.248107807818777,0.306923946576125,0.561320188866147,0.384417447767103,1.02341449813341,0.321707842287215,0,0.308419387605311,0,0,0.519254429183621,0.116210378459959,0,1.00253235151642,0.184161977871793,0.229628896329213,0.364182336013434,2.22911505431021,0.451199612907412,0.231046011313244,0,1.46139224653261,0.211103257785751,1.13733384070897,3.2317804002538,1.72732732881711,1.54227252690289,0.541892875087706,1.00337954770971,0,0,0.223874754722178,0.438519753291869,0,1.53870075069834,0.656029291399411,0,2.16386124460217,0.0915694648183434,0,0.574265537996172,0,0,0.773365746336976,0.154048617114644,0.15350367472613,0.137836572484531,1.07420244868274,0.870100163485371,0.596586391912706,0.267096106940212,0,0,0,0.10115778085555,0.929691098594572,0.31481234683064,0,4.00443654228915,0.532306030317022,1.73986598415015,0.37064843820784,0.429374660225974,0,0,0.953150969619124,1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|phase1_expression=0,0,0.422863212287913,0,0,0,0,0,0.261185628199839,0,0,0,0.263766978228454,2.72285976512103,0.662794751455832,0.672325146451775,0.602694528023977,0.730310090387373,0.487932798790507,0,0,0,0,0,0.125542639594803,0.534893840235659,0.0821005894499457,0,21.6350352266897,11.8987113410136,4.18003532953405,0,0,0,0,0,0,3.32397245119126,6.81851121398482,7.59538047505481,1.34349284543955,1.94336199611388,1.54545340580512,3.05336301437086,0.755751887377619,2.66842467306598,0.464858073811369,0.822335776043652,0,0.575384784644301,0.256160706529101,0.709446689665756,0,0.645484683583826,0,0.564727018627814,0.272906150057846,0.449446968890169,0.612167784741805,1.28371610830437,0,1.31940520074686,1.79517291859469,0.426224750532694,0.870627715885752,1.13477044938228,0,1.00499466102697,1.0429658368404,0.434377689410233,0.605399502633369,0.368277635987565,0.316462387440884,0,0,0,0.112328631146495,0,0,0,0,0,1.75996244461323,14.7457425040775,8.00558328477199,8.10787422876364,19.6194033647646,10.3455439191807,15.8650769468367,13.3567525634951,10.2458334439701,23.4894875748376,15.2909291250092,2.64342657158052,2.80254281490768,0,36.1945977009453,33.0129040709298,32.690638340922,14.2108521082076,33.2440711966262,30.3006595670229,19.4826728407911,10.6954038609767,15.3195071886915,17.5011776721061,14.3526047795458,9.60684897942564,9.10415432919148,7.23526780256175,8.0141505157896,11.012517257932,41.0753779958907,37.7232567606495,50.1770514263889,11.2176249270591,29.5079780073479,28.1774505295757,22.7717722817553,16.8839669591771,12.370585623272,10.4549724889321,13.250610478844,18.9420184508539,19.9889162483753,21.0731754319175,13.9591759476578,17.338179917327,15.7789715512269,21.578836178537,0,0,0.255725123687061,0,0,0.434539556882471,0,0.486634870302636,0.378139268656271,0.221729397462564,0.614843499851882,1.63723844372141,0,0,0.649094787309367,0.348259474598534,0,0,0,1.11437250398869,2.18638648103376,1.72046919021225,2.08284300964557,5.08777147731609,3.35599548967925,3.30141650328081,2.50793959844173,2.06733407335463,2.13459757612026,3.01248551488203,4.43112248820062,5.32190474002959,4.63717909341522,1.83831540172934,3.24056779152704,2.23249320710199,2.02076435363553,2.47745257063309,1.53316637465883,2.84779697870439,1.28241220751285,3.9534125230819,0,0,0,0,0,1.14734648299525,0.709336764396714,0.560677600142307,0,0.49333509683432,0.311211035399766,0.134710672069688,0.490385709340376,0,0.576175924479999,0.234321431833797,0,0,0,0.117434498643765,0.161872944368132,0,0,0.245668634623536,0.103325781175765,0,0,0,0,0,0.375355559615893,0.554128230968366,0.438977620880838,0.30648779579902,0,1.02088964844019,0.179389635688862,0.213557388818567,0.635795703478686,1.20036438433761,0.618315175430633,0.772921620136887,0.18611685633159,2.36286865137773,1.46155507741798,0.757301322732344,1.47279837827679,0,0.710019185033229,0.201504196455281,0.169560592310488,0.966304265816484,0,0.286804595389004,0.121973706129595,0,0.232387885739037,0.10366105501537,0,0,0,0.643240938192885,0,1.85747171212792,2.88751792667834,0,0,0,0,0,0,0,0,0,3.69077727312324,2.80483547606892,0.4115740113314,0,0,3.9313088667105,0.590789906681404,0,0,0.171567810298526,0,0,0.502644862058154,0.0925884451585296,0.325808305310325,0,0,0.695582429850461,0.117408694235822,4.04226053731007,5.55582615091933,4.56609965363036,0,0,0.738651018262192,0,0.445893486866185,0,0,0,1.88072897675981,0,0,0,0,0,0,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0.258543431515556,3.57656445851882,0,1.59562869950922,3.12022310734098,0,2.83698264046557,0.799266537048298,0.285955987316295,0,3.29296134712308,0.977208552881205,0.710783897485092,1.58390374586686,0,0,0.299918973546171,1.2162378064119,0,0,0,0,1.42636905040718,0,1.43833425785268,0.537182889719687,0,16.156522336558,16.6033232641828,14.6311061358913,1.01637849688985,0,0.773288812777695,0.167516265334349,0,0,5.9832291840805,1.24324654030811,7.60687248658667,3.50119364741774,0.542530047399471,0.207970861530807,0,0.157702415033935,0,0,0,0,0.664225598535437,1.29058417979192,0.173767228936166,0.195801157462741,0,14.4737618286021,11.6485668442053,17.9302297109786,0,0,0.30239029332968,0.248107807818777,0.306923946576125,0.561320188866147,0.384417447767103,1.02341449813341,0.321707842287215,0,0.308419387605311,0,0,0.519254429183621,0.116210378459959,0,1.00253235151642,0.184161977871793,0.229628896329213,0.364182336013434,2.22911505431021,0.451199612907412,0.231046011313244,0,1.46139224653261,0.211103257785751,1.13733384070897,3.2317804002538,1.72732732881711,1.54227252690289,0.541892875087706,1.00337954770971,0,0,0.223874754722178,0.438519753291869,0,1.53870075069834,0.656029291399411,0,2.16386124460217,0.0915694648183434,0,0.574265537996172,0,0,0.773365746336976,0.154048617114644,0.15350367472613,0.137836572484531,1.07420244868274,0.870100163485371,0.596586391912706,0.267096106940212,0,0,0,0.10115778085555,0.929691098594572,0.31481234683064,0,4.00443654228915,0.532306030317022,1.73986598415015,0.37064843820784,0.429374660225974,0,0,0.953150969619124,1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| ||
|short_description=p4@S1PR1 | |short_description=p4@S1PR1 | ||
}} | }} |
Latest revision as of 05:27, 25 September 2015
Short description: | p4@S1PR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_S1PR1_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 2bp_to_NM_001400, uc001dud.2_5end |
EntrezGene: | S1PR1 |
HGNC: | 3165 |
UniProt: | P21453 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 4.13e-21 | 53 |
common lymphoid progenitor | 4.13e-21 | 53 |
lymphoid lineage restricted progenitor cell | 6.08e-21 | 52 |
T cell | 1.24e-16 | 25 |
pro-T cell | 1.24e-16 | 25 |
mature alpha-beta T cell | 4.67e-15 | 18 |
alpha-beta T cell | 4.67e-15 | 18 |
immature T cell | 4.67e-15 | 18 |
mature T cell | 4.67e-15 | 18 |
immature alpha-beta T cell | 4.67e-15 | 18 |
endothelial cell | 2.80e-13 | 36 |
endothelial cell of vascular tree | 6.03e-12 | 24 |
CD8-positive, alpha-beta T cell | 6.63e-11 | 11 |
meso-epithelial cell | 9.03e-11 | 45 |
leukocyte | 5.32e-10 | 136 |
blood vessel endothelial cell | 5.61e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.61e-09 | 18 |
nongranular leukocyte | 6.24e-09 | 115 |
B cell | 4.06e-08 | 14 |
CD4-positive, alpha-beta T cell | 3.94e-07 | 6 |
lining cell | 6.83e-07 | 58 |
barrier cell | 6.83e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
adult organism | 8.02e-18 | 114 |
blood | 1.41e-12 | 15 |
haemolymphatic fluid | 1.41e-12 | 15 |
organism substance | 1.41e-12 | 15 |
neural tube | 1.16e-10 | 56 |
neural rod | 1.16e-10 | 56 |
future spinal cord | 1.16e-10 | 56 |
neural keel | 1.16e-10 | 56 |
regional part of nervous system | 1.29e-09 | 53 |
regional part of brain | 1.29e-09 | 53 |
blood vessel endothelium | 5.61e-09 | 18 |
endothelium | 5.61e-09 | 18 |
cardiovascular system endothelium | 5.61e-09 | 18 |
brain grey matter | 1.90e-07 | 34 |
gray matter | 1.90e-07 | 34 |
regional part of forebrain | 2.75e-07 | 41 |
forebrain | 2.75e-07 | 41 |
anterior neural tube | 2.75e-07 | 41 |
future forebrain | 2.75e-07 | 41 |
telencephalon | 3.82e-07 | 34 |
neural plate | 4.23e-07 | 82 |
presumptive neural plate | 4.23e-07 | 82 |