FFCP PHASE1:Hg19::chr9:71922022..71922051,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:71922022..71922051,- | |||
|coexpression_cluster_id=C177 | |coexpression_cluster_id=C177 | ||
|description=CAGE_peak_at_chr9:71922022..71922051,- | |description=CAGE_peak_at_chr9:71922022..71922051,- | ||
|id=chr9:71922022..71922051,- | |id=chr9:71922022..71922051,- | ||
|ontology_enrichment_celltype=CL:0002603;1.94e-18;3!CL:0000128;1.92e-08;7!CL:0000126;1.92e-08;7!CL:0000127;1.92e-08;7 | |ontology_enrichment_celltype=CL:0002319!5.42e-18!25;CL:0000047!5.24e-15!8;CL:0000540!5.54e-15!6;CL:0000031!5.54e-15!6;CL:0000404!5.54e-15!6;CL:0000128!2.05e-13!7;CL:0000126!2.05e-13!7;CL:0000127!2.05e-13!7;CL:0002453!2.05e-13!7;CL:0000133!1.95e-11!59;CL:0000221!9.74e-10!71;CL:0000243!1.39e-08!15;CL:0000125!1.39e-08!15;CL:0000030!1.39e-08!15;CL:0000339!1.39e-08!15;CL:0002605!1.72e-08!3;CL:0000095!1.59e-07!17;CL:0000123!1.59e-07!17 | ||
| | |ontology_enrichment_celltype_v019=CL:0002603;1.94e-18;3!CL:0000128;1.92e-08;7!CL:0000126;1.92e-08;7!CL:0000127;1.92e-08;7 | ||
|ontology_enrichment_disease=DOID:114;4.08e-27;2!DOID:178;1.84e-14;1!DOID:326;1.84e-14;1!DOID:3978;1.84e-14;1!DOID:3394;1.84e-14;1!DOID:5844;1.84e-14;1!DOID:1287;4.40e-14;4!DOID:1909;3.56e-08;2 | |ontology_enrichment_celltype_v019_2=CL:0002603,1.94e-18,3;CL:0000128,1.92e-08,7;CL:0000126,1.92e-08,7;CL:0000127,1.92e-08,7;CL:0002453,1.92e-08,7 | ||
|ontology_enrichment_uberon=UBERON:0007100;7.35e-19;25!UBERON:0002146;7.12e-15;1!UBERON:0005623;7.12e-15;1!UBERON:0002084;1.84e-14;1!UBERON:0002082;1.84e-14;1!UBERON:0002037;1.06e-09;6!UBERON:0002680;9.37e-07;9!UBERON:0001895;9.37e-07;9 | |ontology_enrichment_development_v019=UBERON:0004140;5.42e-15;1!UBERON:0010226;1.84e-14;1 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;4.08e-27;2!DOID:178;1.84e-14;1!DOID:326;1.84e-14;1!DOID:3978;1.84e-14;1!DOID:3394;1.84e-14;1!DOID:5844;1.84e-14;1!DOID:1287;4.40e-14;4!DOID:1909;3.56e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,4.67e-27,2;DOID:178,1.84e-14,1;DOID:326,1.84e-14,1;DOID:3978,1.84e-14,1;DOID:3394,1.84e-14,1;DOID:5844,1.84e-14,1;DOID:1287,4.70e-14,4;DOID:1909,3.56e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0007100!7.91e-10!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;7.35e-19;25!UBERON:0002146;7.12e-15;1!UBERON:0005623;7.12e-15;1!UBERON:0002084;1.84e-14;1!UBERON:0002082;1.84e-14;1!UBERON:0002037;1.06e-09;6!UBERON:0002680;9.37e-07;9!UBERON:0001895;9.37e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.77e-17,27;UBERON:0002146,7.13e-15,1;UBERON:0005623,7.13e-15,1;UBERON:0002084,1.07e-14,1;UBERON:0002082,1.07e-14,1;UBERON:0010226,1.07e-14,1;UBERON:0002037,1.06e-09,6;UBERON:0006215,1.06e-09,6;UBERON:0002680,9.37e-07,9;UBERON:0001895,9.37e-07,9;UBERON:0010092,9.37e-07,9;UBERON:0003103,9.50e-07,68 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10808952269109,0,1.88072832886853,0.85870796139317,0.136874425072884,0.753255837568817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0.74000264525148,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0,0,0.725627385107593,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0.288732895522148,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380987365753014,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,1.54657762555539,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79515087581472,0,0,0.103041011647722,0.824125183365091,1.15513299888823,0,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0.409074730008619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451191321234361,0.588187602953219,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.9304013998769,0,0,0,0,0,0.343972064943233,0,0,0,0.0969890164884194,0,0.677942222341597,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0.271808412147228,0,0,0,0,0,0,0,0,0.279282401272254,5.27068975226872,0,1.39775300349294,1.28767814440971,2.00854311697685,52.2015581221863,0,0,0,0,0,0,0,0,0,0.321506296930038,0.137539436597234,0.415440338029185,0,0,0,0,0,0.0524545881349981,0,0,0,0,1.98627591109629,0,0,0,0,0,0.246277562248017,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0.249960815924213,86.136698763656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327130788511688,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0.196295437002051,0.235939446695481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0.490751168076215,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,2.2437542543236,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0,0,0,0,1.00918676322552,0,0,0,0,0,0.215166616178029,0.332660356546013,0,0,0,0.269475606319761,0,0,0,0,0,0 | ||
|short_description=p@chr9:71922022..71922051,- | |short_description=p@chr9:71922022..71922051,- | ||
}} | }} |
Latest revision as of 02:26, 1 August 2015
Short description: | p@chr9:71922022..71922051, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:71922022..71922051, - |
Coexpression cluster: | C177_melanoma_Melanocyte_mesenchymal_retina_Mallassezderived_Gingival_squamous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebellum | 1.94e-18 | 3 |
oligodendrocyte | 1.92e-08 | 7 |
macroglial cell | 1.92e-08 | 7 |
astrocyte | 1.92e-08 | 7 |
oligodendrocyte precursor cell | 1.92e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.77e-17 | 27 |
pulmonary valve | 7.13e-15 | 1 |
semi-lunar valve | 7.13e-15 | 1 |
heart left ventricle | 1.07e-14 | 1 |
cardiac ventricle | 1.07e-14 | 1 |
future cardiac ventricle | 1.07e-14 | 1 |
cerebellum | 1.06e-09 | 6 |
rhombic lip | 1.06e-09 | 6 |
regional part of metencephalon | 9.37e-07 | 9 |
metencephalon | 9.37e-07 | 9 |
future metencephalon | 9.37e-07 | 9 |
compound organ | 9.50e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
heart disease | 4.67e-27 | 2 |
vascular disease | 1.84e-14 | 1 |
ischemia | 1.84e-14 | 1 |
extrinsic cardiomyopathy | 1.84e-14 | 1 |
myocardial ischemia | 1.84e-14 | 1 |
myocardial infarction | 1.84e-14 | 1 |
cardiovascular system disease | 4.70e-14 | 4 |
melanoma | 3.56e-08 | 2 |