FFCP PHASE1:Hg19::chr18:40857329..40857357,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6860 | |EntrezGene=6860 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11512 | |HGNC=11512 | ||
|TSSclassifier=strong | |||
|UniProt=F5GY31 | |UniProt=F5GY31 | ||
|association_with_transcript=0bp_to_ENST00000442661_5end | |association_with_transcript=0bp_to_ENST00000442661_5end | ||
|cluster_id=chr18:40857329..40857357,- | |||
|coexpression_cluster_id=C759 | |coexpression_cluster_id=C759 | ||
|description=CAGE_peak_2_at_SYT4_5end | |description=CAGE_peak_2_at_SYT4_5end | ||
|id=chr18:40857329..40857357,- | |id=chr18:40857329..40857357,- | ||
|ontology_enrichment_celltype=CL:0000047!1.03e-08!8 | |ontology_enrichment_celltype=CL:0000047!1.03e-08!8 | ||
|ontology_enrichment_celltype_v019=CL:0000333;4.14e-07;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.21e-20;82!UBERON:0006215;8.25e-09;3!UBERON:0006241;4.95e-07;3!UBERON:0003057;4.95e-07;3 | |||
|ontology_enrichment_disease=DOID:171!1.03e-10!10 | |ontology_enrichment_disease=DOID:171!1.03e-10!10 | ||
|ontology_enrichment_disease_v019=DOID:171;4.50e-10;10!DOID:169;4.47e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:171,4.57e-10,10;DOID:169,4.80e-09,6 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002619;6.31e-50;22!UBERON:0002780;6.57e-49;41!UBERON:0001890;6.57e-49;41!UBERON:0001869;1.08e-48;32!UBERON:0003528;3.52e-47;34!UBERON:0002020;3.52e-47;34!UBERON:0001893;1.91e-46;34!UBERON:0001950;7.10e-46;20!UBERON:0002791;1.87e-45;32!UBERON:0000073;3.42e-45;53!UBERON:0002616;3.42e-45;53!UBERON:0000956;2.46e-43;25!UBERON:0000203;2.46e-43;25!UBERON:0001017;1.28e-33;75!UBERON:0000955;3.77e-33;68!UBERON:0001016;4.07e-29;83!UBERON:0001894;3.91e-16;7!UBERON:0001871;1.28e-15;6!UBERON:0000200;9.95e-15;6!UBERON:0004733;1.21e-14;12!UBERON:0002028;1.21e-14;12!UBERON:0004732;2.30e-13;13!UBERON:0002298;3.99e-13;6!UBERON:0007023;1.72e-12;114!UBERON:0002420;2.93e-12;9!UBERON:0007245;2.93e-12;9!UBERON:0010009;2.93e-12;9!UBERON:0010011;2.93e-12;9!UBERON:0000454;2.93e-12;9!UBERON:0001872;3.15e-12;5!UBERON:0002021;3.46e-12;5!UBERON:0011216;3.72e-12;132!UBERON:0000125;4.45e-12;9!UBERON:0002308;4.45e-12;9!UBERON:0000349;6.90e-12;5!UBERON:0003296;1.41e-10;4!UBERON:0010133;1.41e-10;4!UBERON:0000369;2.87e-10;4!UBERON:0002435;2.87e-10;4!UBERON:0000204;2.87e-10;4!UBERON:0002784;1.53e-09;4!UBERON:0002680;1.86e-09;9!UBERON:0001895;1.86e-09;9!UBERON:0009663;1.58e-08;7!UBERON:0001870;1.84e-08;3!UBERON:0005383;5.26e-08;3!UBERON:0005382;5.26e-08;3!UBERON:0000988;1.57e-07;3!UBERON:0001896;2.95e-07;3!UBERON:0005290;2.95e-07;3!UBERON:0000013;4.14e-07;5!UBERON:0002410;4.14e-07;5!UBERON:0002240;4.95e-07;3!UBERON:0005174;4.95e-07;3!UBERON:0001137;4.95e-07;3 | |||
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|short_description=p2@SYT4 | |short_description=p2@SYT4 | ||
}} | }} |
Latest revision as of 13:44, 19 September 2015
Short description: | p2@SYT4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SYT4_5end |
Coexpression cluster: | C759_nonsmall_gastrointestinal_occipital_pineal_cerebellum_small_argyrophil |
Association with transcript: | 0bp_to_ENST00000442661_5end |
EntrezGene: | SYT4 |
HGNC: | 11512 |
UniProt: | F5GY31 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 4.57e-10 | 10 |
neuroendocrine tumor | 4.80e-09 | 6 |