FFCP PHASE1:Hg19::chr8:19363100..19363113,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=232bp_to_CU687408_5end | |association_with_transcript=232bp_to_CU687408_5end | ||
|cluster_id=chr8:19363100..19363113,- | |||
|description=CAGE_peak_1_at_CU687408_5end | |description=CAGE_peak_1_at_CU687408_5end | ||
|id=chr8:19363100..19363113,- | |id=chr8:19363100..19363113,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003124;9.99e-30;1!UBERON:0009847;1.04e-10;3!UBERON:0003353;1.04e-10;3!UBERON:0006603;9.12e-08;65 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.12e-33!115;UBERON:0001950!1.92e-26!20;UBERON:0002619!7.60e-24!22;UBERON:0000956!1.06e-20!25;UBERON:0000203!1.06e-20!25;UBERON:0001869!1.24e-20!32;UBERON:0001893!3.17e-19!34;UBERON:0002791!2.80e-17!33;UBERON:0002020!1.11e-16!34;UBERON:0003528!1.11e-16!34;UBERON:0002780!2.30e-15!41;UBERON:0001890!2.30e-15!41;UBERON:0006240!2.30e-15!41;UBERON:0003080!6.45e-15!42;UBERON:0001871!1.33e-13!7;UBERON:0001049!3.53e-13!57;UBERON:0005068!3.53e-13!57;UBERON:0006241!3.53e-13!57;UBERON:0007135!3.53e-13!57;UBERON:0000200!6.05e-13!6;UBERON:0002616!1.36e-12!59;UBERON:0000955!2.39e-11!69;UBERON:0006238!2.39e-11!69;UBERON:0002771!5.33e-10!3;UBERON:0003056!3.40e-09!61;UBERON:0001017!6.67e-09!82;UBERON:0000153!8.51e-09!129;UBERON:0007811!8.51e-09!129;UBERON:0003075!1.90e-08!86;UBERON:0007284!1.90e-08!86;UBERON:0005743!2.67e-08!86;UBERON:0002346!6.89e-08!90;UBERON:0000033!1.06e-07!123;UBERON:0003127!2.23e-07!2;UBERON:0000073!3.88e-07!94;UBERON:0001016!3.88e-07!94 | |ontology_enrichment_uberon=UBERON:0007023!8.12e-33!115;UBERON:0001950!1.92e-26!20;UBERON:0002619!7.60e-24!22;UBERON:0000956!1.06e-20!25;UBERON:0000203!1.06e-20!25;UBERON:0001869!1.24e-20!32;UBERON:0001893!3.17e-19!34;UBERON:0002791!2.80e-17!33;UBERON:0002020!1.11e-16!34;UBERON:0003528!1.11e-16!34;UBERON:0002780!2.30e-15!41;UBERON:0001890!2.30e-15!41;UBERON:0006240!2.30e-15!41;UBERON:0003080!6.45e-15!42;UBERON:0001871!1.33e-13!7;UBERON:0001049!3.53e-13!57;UBERON:0005068!3.53e-13!57;UBERON:0006241!3.53e-13!57;UBERON:0007135!3.53e-13!57;UBERON:0000200!6.05e-13!6;UBERON:0002616!1.36e-12!59;UBERON:0000955!2.39e-11!69;UBERON:0006238!2.39e-11!69;UBERON:0002771!5.33e-10!3;UBERON:0003056!3.40e-09!61;UBERON:0001017!6.67e-09!82;UBERON:0000153!8.51e-09!129;UBERON:0007811!8.51e-09!129;UBERON:0003075!1.90e-08!86;UBERON:0007284!1.90e-08!86;UBERON:0005743!2.67e-08!86;UBERON:0002346!6.89e-08!90;UBERON:0000033!1.06e-07!123;UBERON:0003127!2.23e-07!2;UBERON:0000073!3.88e-07!94;UBERON:0001016!3.88e-07!94 | ||
|ontology_enrichment_uberon_v019=UBERON:0000996;7.48e-30;1!UBERON:0000077;2.43e-17;27!UBERON:0001255;1.54e-15;2!UBERON:0001556;1.54e-15;2!UBERON:0001987;1.82e-08;4!UBERON:0002021;6.21e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000996,7.48e-30,1;UBERON:0000162,5.73e-19,14;UBERON:0001353,5.73e-19,14;UBERON:0000163,5.73e-19,14;UBERON:0006866,5.73e-19,14;UBERON:0000164,5.73e-19,14;UBERON:0000931,5.73e-19,14;UBERON:0004122,9.28e-18,15;UBERON:0000077,3.41e-16,29;UBERON:0001255,1.54e-15,2;UBERON:0001556,1.54e-15,2;UBERON:0001046,3.46e-14,19;UBERON:0001008,5.47e-10,48;UBERON:0003064,7.35e-10,28;UBERON:0007023,3.49e-09,114;UBERON:0001987,1.82e-08,4;UBERON:0004340,1.82e-08,4;UBERON:0000161,8.15e-08,36;UBERON:0002021,6.77e-07,5 | |||
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| ||
|short_description=p1@CU687408 | |short_description=p1@CU687408 | ||
}} | }} |
Latest revision as of 16:37, 31 July 2015
Short description: | p1@CU687408 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CU687408_5end |
Coexpression cluster: | NA |
Association with transcript: | 232bp_to_CU687408_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vagina | 7.48e-30 | 1 |
cloaca | 5.73e-19 | 14 |
anal region | 5.73e-19 | 14 |
embryonic cloaca | 5.73e-19 | 14 |
terminal part of digestive tract | 5.73e-19 | 14 |
primitive urogenital sinus | 5.73e-19 | 14 |
proctodeum | 5.73e-19 | 14 |
genitourinary system | 9.28e-18 | 15 |
mixed endoderm/mesoderm-derived structure | 3.41e-16 | 29 |
urinary bladder | 1.54e-15 | 2 |
lower urinary tract | 1.54e-15 | 2 |
hindgut | 3.46e-14 | 19 |
renal system | 5.47e-10 | 48 |
intermediate mesoderm | 7.35e-10 | 28 |
adult organism | 3.49e-09 | 114 |
placenta | 1.82e-08 | 4 |
allantois | 1.82e-08 | 4 |
orifice | 8.15e-08 | 36 |
occipital lobe | 6.77e-07 | 5 |