FFCP PHASE1:Hg19::chr11:65325626..65325637,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4054 | |EntrezGene=4054 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6716 | |HGNC=6716 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NS15,Q8WYU6,B9EG76 | |UniProt=Q9NS15,Q8WYU6,B9EG76 | ||
|association_with_transcript=61bp_to_ENST00000301873,NM_001130144,NM_001164266,NM_021070,uc001oei.2,uc001oej.2,uc010roi.1,uc010roj.1_5end | |association_with_transcript=61bp_to_ENST00000301873,NM_001130144,NM_001164266,NM_021070,uc001oei.2,uc001oej.2,uc010roi.1,uc010roj.1_5end | ||
|cluster_id=chr11:65325626..65325637,- | |||
|description=CAGE_peak_4_at_LTBP3_5end | |description=CAGE_peak_4_at_LTBP3_5end | ||
|id=chr11:65325626..65325637,- | |id=chr11:65325626..65325637,- | ||
|ontology_enrichment_celltype=CL:0000055!1.02e-20!180;CL:0000057!4.55e-12!75;CL:0000183!1.22e-10!59;CL:0000680!2.66e-09!57;CL:0000056!2.66e-09!57;CL:0000355!2.66e-09!57;CL:0000187!4.91e-09!54;CL:0000222!3.41e-08!119;CL:0000393!4.41e-07!60;CL:0000211!4.41e-07!60;CL:0000192!4.44e-07!42;CL:0000514!4.44e-07!42 | |ontology_enrichment_celltype=CL:0000055!1.02e-20!180;CL:0000057!4.55e-12!75;CL:0000183!1.22e-10!59;CL:0000680!2.66e-09!57;CL:0000056!2.66e-09!57;CL:0000355!2.66e-09!57;CL:0000187!4.91e-09!54;CL:0000222!3.41e-08!119;CL:0000393!4.41e-07!60;CL:0000211!4.41e-07!60;CL:0000192!4.44e-07!42;CL:0000514!4.44e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0002494;5.55e-08;16!CL:0000499;2.16e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.37e-13,76;CL:0000187,3.11e-08,55;CL:0000680,4.76e-08,58;CL:0000056,4.76e-08,58;CL:0000355,4.76e-08,58;CL:0002494,5.84e-08,16;CL:0000499,1.35e-07,28;CL:0000192,4.17e-07,43;CL:0000514,4.17e-07,43;CL:0000136,8.90e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!7.09e-16!365;UBERON:0000481!1.78e-12!347;UBERON:0000119!2.29e-12!312;UBERON:0003914!6.20e-12!118;UBERON:0004872!6.80e-12!84;UBERON:0000483!7.73e-12!309;UBERON:0002100!8.31e-12!216;UBERON:0000477!2.43e-11!286;UBERON:0004111!8.49e-11!241;UBERON:0005256!2.96e-10!143;UBERON:0002049!3.12e-10!79;UBERON:0007798!3.12e-10!79;UBERON:0001637!1.15e-09!42;UBERON:0003509!1.15e-09!42;UBERON:0004572!1.15e-09!42;UBERON:0004535!3.29e-09!110;UBERON:0002385!3.76e-09!63;UBERON:0001015!3.76e-09!63;UBERON:0000383!3.76e-09!63;UBERON:0001134!5.91e-09!61;UBERON:0002036!5.91e-09!61;UBERON:0003082!5.91e-09!61;UBERON:0000490!7.18e-09!138;UBERON:0004290!7.89e-09!70;UBERON:0001009!8.41e-09!113;UBERON:0000025!9.13e-09!194;UBERON:0000914!1.22e-08!83;UBERON:0002329!1.22e-08!83;UBERON:0003077!1.22e-08!83;UBERON:0003059!1.22e-08!83;UBERON:0007282!1.22e-08!83;UBERON:0009618!1.22e-08!83;UBERON:0007285!1.22e-08!83;UBERON:0001981!3.01e-08!60;UBERON:0007500!3.01e-08!60;UBERON:0004537!3.01e-08!60;UBERON:0006965!3.01e-08!60;UBERON:0004573!4.02e-08!33;UBERON:0004571!4.02e-08!33;UBERON:0000948!5.38e-08!24;UBERON:0005498!5.38e-08!24;UBERON:0004140!5.38e-08!24;UBERON:0009881!5.38e-08!24;UBERON:0004141!5.38e-08!24;UBERON:0003084!5.38e-08!24;UBERON:0007005!5.38e-08!24;UBERON:0004139!5.38e-08!24;UBERON:0004291!5.38e-08!24;UBERON:0000055!7.35e-08!69;UBERON:0000468!1.02e-07!659;UBERON:0000486!2.90e-07!82;UBERON:0003104!3.87e-07!238;UBERON:0009142!3.87e-07!238;UBERON:0003103!5.96e-07!69;UBERON:0007100!6.57e-07!27 | |ontology_enrichment_uberon=UBERON:0000475!7.09e-16!365;UBERON:0000481!1.78e-12!347;UBERON:0000119!2.29e-12!312;UBERON:0003914!6.20e-12!118;UBERON:0004872!6.80e-12!84;UBERON:0000483!7.73e-12!309;UBERON:0002100!8.31e-12!216;UBERON:0000477!2.43e-11!286;UBERON:0004111!8.49e-11!241;UBERON:0005256!2.96e-10!143;UBERON:0002049!3.12e-10!79;UBERON:0007798!3.12e-10!79;UBERON:0001637!1.15e-09!42;UBERON:0003509!1.15e-09!42;UBERON:0004572!1.15e-09!42;UBERON:0004535!3.29e-09!110;UBERON:0002385!3.76e-09!63;UBERON:0001015!3.76e-09!63;UBERON:0000383!3.76e-09!63;UBERON:0001134!5.91e-09!61;UBERON:0002036!5.91e-09!61;UBERON:0003082!5.91e-09!61;UBERON:0000490!7.18e-09!138;UBERON:0004290!7.89e-09!70;UBERON:0001009!8.41e-09!113;UBERON:0000025!9.13e-09!194;UBERON:0000914!1.22e-08!83;UBERON:0002329!1.22e-08!83;UBERON:0003077!1.22e-08!83;UBERON:0003059!1.22e-08!83;UBERON:0007282!1.22e-08!83;UBERON:0009618!1.22e-08!83;UBERON:0007285!1.22e-08!83;UBERON:0001981!3.01e-08!60;UBERON:0007500!3.01e-08!60;UBERON:0004537!3.01e-08!60;UBERON:0006965!3.01e-08!60;UBERON:0004573!4.02e-08!33;UBERON:0004571!4.02e-08!33;UBERON:0000948!5.38e-08!24;UBERON:0005498!5.38e-08!24;UBERON:0004140!5.38e-08!24;UBERON:0009881!5.38e-08!24;UBERON:0004141!5.38e-08!24;UBERON:0003084!5.38e-08!24;UBERON:0007005!5.38e-08!24;UBERON:0004139!5.38e-08!24;UBERON:0004291!5.38e-08!24;UBERON:0000055!7.35e-08!69;UBERON:0000468!1.02e-07!659;UBERON:0000486!2.90e-07!82;UBERON:0003104!3.87e-07!238;UBERON:0009142!3.87e-07!238;UBERON:0003103!5.96e-07!69;UBERON:0007100!6.57e-07!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0000948;1.06e-09;22!UBERON:0004573;1.43e-08;33!UBERON:0004571;1.43e-08;33!UBERON:0001637;3.68e-08;42!UBERON:0003509;3.68e-08;42!UBERON:0004572;3.68e-08;42!UBERON:0007100;9.48e-08;25 | |||
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|phase1_expression=2.54349730978779,1.2846031433459,3.94672331468719,2.00146596706261,3.12872766099101,6.97870819280295,2.53299878168311,3.15859936713415,1.56711376919903,0.737201809504527,0,0.218441372130172,0.791300934685361,2.35156070624089,4.97096063591874,1.34465029290355,1.80808358407193,0,1.46379839637152,3.69363174230364,4.48801520737357,6.58254915103984,2.28988789704845,0.684372125364421,1.12988375635323,0,0,0,0,0,0.309632246632152,0,0,0.739508020333575,0,0,0,0,0.200544447470142,0.217010870715852,0.223915474239924,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786021525498329,0.616804496998528,0.167186495390678,0,0,0,0,0,0,0,0,0,0.164437904603676,0.276350017785848,0,0.296573126324121,0.267540828089713,1.04535523804977,0,0,0,0,0.318565414324097,0,0,0,0.127986611154418,0,0.236777252044017,0,0.403213486449465,0,0.724122019413995,14.6284119788377,2.01210257911091,2.55725123687061,5.06014813338393,2.00535164254356,7.9665585428453,3.1811437882044,5.83961844363163,1.51255707462509,1.77383517970051,2.81071314218003,0.785874452986276,0,0,0,0,0,0.476981248610684,0,0.371457501329565,0.198762407366705,0.860234595106124,1.38856200643038,1.69592382577203,5.03399323451887,1.37559020970034,0.417989933073621,0.516833518338658,1.77883131343355,0.33472061276467,0,0,1.70843440283719,1.10298924103761,3.24056779152704,0.446498641420399,0,0.337834441449967,0,2.84779697870439,0.732806975721629,0,0,0.436094052142534,4.96971951695318,2.78587125662075,3.04541115870403,20.9390733146634,3.19201543978521,3.92474320099615,0,5.18001851676036,2.17847724779836,1.21239604862719,1.30769522490767,3.78393569112329,4.03323147135999,0.70296429550139,3.74592092196385,0.570471821544449,2.69007624993242,0.117434498643765,0.161872944368132,0.140450806702248,1.42907919878425,0.491337269247072,1.54988671763648,1.18800285728205,2.22540236350701,6.37112953356618,7.18618141816238,0,0.250237039743928,0.831192346452549,0.438977620880838,1.5324389789951,1.95309476578576,0.567160915800105,1.79389635688862,1.70845911054854,1.48352330811693,3.90118424909723,2.06105058476878,3.09168648054755,1.67505170698431,2.70042131586026,1.94874010322397,2.01947019395292,2.02509777013059,7.43571861366535,1.42003837006646,1.10827308050404,0.339121184620975,0.193260853163297,0,0,0,0,0,0.10366105501537,0,0,0,1.92972281457866,1.38134921352481,3.71494342425583,4.33127689001751,0,0,0,0,0,0,0,0,0,0,0,0,2.94017422771084,0,0.982827216677626,1.18157981336281,0,0.368965315629341,2.57351715447788,0.548751427043128,0,0,0.185176890317059,0.325808305310325,0,4.3299402607582,1.39116485970092,8.45342598497916,0,0,0.761016608938393,0,0,0,0.234004265139238,0,0,0.16798212819886,0.141775097242386,0,0.290633938513962,0.383382679165211,0,0.44024217006613,0.621984346622316,0.144119953416961,0.25248486685276,0.190493682876507,1.52795370223311,1.17217447210047,3.4214489204541,0.308482478109971,0.901029173531752,1.14330573052231,1.56983518083505,3.48768055066624,0.66004457238855,7.10994436667778,10.7296933755565,0.845302752556,3.19125739901845,1.04007436911366,0.514414748524284,0,0.266422179016099,1.57275793023962,13.5655401347861,0,0.65147236858747,1.42156779497018,0.791951872933429,2.71295439353627,9.58686804460323,6.39827143565165,0,0,0,1.67737398844108,1.14861935834114,2.85273810081437,0.723906533337896,3.90405012845728,0.358121926479791,0,0.788123040807709,0.215627574859517,0,1.77866236955724,1.30139853857622,0,0.167516265334349,0.637938751653163,0,0,0,6.62534055283355,5.00170521059677,2.17012018959788,2.07970861530807,0.713715955188647,1.10391690523754,1.63997980989798,2.40756879782175,9.09630016223939,3.10419213877515,0.664225598535437,0.553107505625109,2.08520674723399,4.11182430671755,7.20601190002797,0.620304078368662,0.647142602455851,0.320182673410333,0.303127571446259,1.66435439510497,0.604780586659361,6.20269519546942,1.2276957863045,4.77122160536225,5.50998341799514,5.11707249066703,3.69964018630297,2.96836132889982,0.925258162815933,4.08391968220192,1.31403449622095,1.55776328755086,1.16210378459959,1.45031339509947,1.60405176242628,1.19705285616665,1.95184561879831,2.1850940160806,4.45823010862042,0.451199612907412,0.15403067420883,0.784349769176855,1.46139224653261,1.37217117560738,1.13733384070897,0.340187410553031,0.215915916102139,4.62681758070868,3.25135725052623,4.01351819083883,0.509752546090077,0.831076008928724,0.671624264166535,0,0,0.256450125116389,5.24823433119529,1.95227036798582,1.13345112812495,0,0,0,0,1.6068392984416,3.77015801339276,0.616194468458578,1.07452572308291,0.275673144969061,0.859361958946189,0.435050081742686,0.511359764496605,3.47224939022276,0.165284915360978,0,0.255225424989168,0.10115778085555,1.39453664789186,11.0184321390724,0.6970372701606,4.62050370264133,1.59691809095107,0,4.07713282028624,0.572499546967965,0,3.16379424718726,0.571890581771475,0.511795582622668,2.1396949401696,3.5002357271853,0,0.359744915166629,1.92175920815238,1.06031162111118,1.8196423341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| ||
|short_description=p4@LTBP3 | |short_description=p4@LTBP3 | ||
}} | }} |
Latest revision as of 09:47, 19 September 2015
Short description: | p4@LTBP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LTBP3_5end |
Coexpression cluster: | NA |
Association with transcript: | 61bp_to_ENST00000301873, NM_001130144, NM_001164266, NM_021070, uc001oei.2, uc001oej.2, uc010roi.1, uc010roj.1_5end |
EntrezGene: | LTBP3 |
HGNC: | 6716 |
UniProt: | Q9NS15Q8WYU6B9EG76 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.37e-13 | 76 |
muscle cell | 3.11e-08 | 55 |
muscle precursor cell | 4.76e-08 | 58 |
myoblast | 4.76e-08 | 58 |
multi-potent skeletal muscle stem cell | 4.76e-08 | 58 |
cardiocyte | 5.84e-08 | 16 |
stromal cell | 1.35e-07 | 28 |
smooth muscle cell | 4.17e-07 | 43 |
smooth muscle myoblast | 4.17e-07 | 43 |
fat cell | 8.90e-07 | 15 |