FFCP PHASE1:Hg19::chr17:26885568..26885585,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=94005 | |EntrezGene=94005 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=14937 | |HGNC=14937 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-3bp_to_AK025825_5end | |association_with_transcript=-3bp_to_AK025825_5end | ||
|cluster_id=chr17:26885568..26885585,- | |||
|description=CAGE_peak_2_at_PIGS_5end | |description=CAGE_peak_2_at_PIGS_5end | ||
|id=chr17:26885568..26885585,- | |id=chr17:26885568..26885585,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002577;2.18e-14;3!CL:0000349;6.33e-11;19!CL:0002595;8.01e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,5.23e-15,3;CL:0000349,6.72e-11,19;CL:0002595,1.18e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;2.46e-07;3!DOID:127;2.46e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.57e-07,3;DOID:127,1.57e-07,3 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001987;6.47e-11;4!UBERON:0003834;8.01e-09;5!UBERON:0001533;8.01e-09;5!UBERON:0000478;1.87e-08;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,2.24e-11,4;UBERON:0004340,2.24e-11,4;UBERON:0003124,6.35e-11,7;UBERON:0003834,1.18e-08,5;UBERON:0001533,1.18e-08,5;UBERON:0000478,1.96e-08,24;UBERON:0005631,4.83e-08,14;UBERON:0000158,4.83e-08,14 | |||
|phase1_expression=0,0.642301571672949,0.845726424575827,0,0,0.872338524100369,0,0,0.261185628199839,0.245733936501509,0.697801167972428,0.218441372130172,0.527533956456907,0.123766352960047,0.662794751455832,0,0,0,0,0.246242116153576,0,0,0,0.273748850145768,0.125542639594803,0.229240217243854,0.164201178899891,0.236132343941038,0.393364276848904,0,0.154816123316076,1.83884244895785,0,0.369754010166788,0.232401601740905,0,0,0,0.200544447470142,0,0.671746422719773,0,0.257575567634187,0,0,0,0,0,0,0,0.512321413058201,0,0,0,1.35426486594342,0.188242339542605,0,0.224723484445085,0,0,0,0.329851300186716,0,0.426224750532694,0.290209238628584,0,0,0,0.521482918420201,0,0,0,0.316462387440884,0,0.212604299965044,0,0,0,0,0,0.59675003159727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.222820913770347,0,0,0,0.384273959177026,0,0,0,0.289803085735052,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0.267440195783507,0,0,0,0.12786256184353,0.361439152384566,0,0,0.795285947051099,0,0.189069634328136,0.443458794925128,0.175669571386252,0.261958150995425,0,0,0,0.174129737299267,0.26591592103773,0,0,0,0,0,0,0,0,0.825354125820202,0.208994966536811,0.516833518338658,0,0.66944122552934,0.805658634218294,0,1.22031028774085,0,0,0,0,0,0,0.949265659568129,0.549605231791222,0,0,0,0,0.379891534993739,0,0.860509862246441,0.354668382198357,0,0,1.97334038733728,0,0.404132016209064,0,0.302714855289863,0,0,0.312160076830321,0,0.448346041655403,0.117434498643765,0,0,0,0.245668634623536,0.103325781175765,0,0.494533858557114,0,0.718618141816238,0,0.125118519871964,0,0.438977620880838,0,0,0.113432183160021,0.358779271377724,0.213557388818567,0.211931901159562,0,0.103052529238439,0.515281080091258,0.37223371266318,0.168776332241266,0,0,0,0.484938170456436,0.710019185033229,0.201504196455281,0.169560592310488,0.386521706326594,0.272746120590835,0.286804595389004,0.365921118388786,0.265059536642971,0.464775771478074,0.414644220061482,0,0,0,0.643240938192885,0,0.464367928031979,0,0.236613600079688,0.337169380156203,0,0.55146986366197,0.871517776369625,0,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0,0.368965315629341,0,0.329250856225877,0,0,0.277765335475589,0,1.03993478527958,0,0.115930404975077,0,0,0.462985512576611,0.380508304469197,0,0,0,0,0.148631162288728,0,0.335964256397719,0.425325291727159,0.53735113621709,0,0.383382679165211,0,0,0.207328115540772,0.144119953416961,0.25248486685276,0.063497894292169,0.381988425558278,0,0,0,1.20137223137567,0.285826432630578,0,0,0.1466765716419,0,3.57656445851882,0,0.26593811658487,1.04007436911366,0,0,0.532844358032199,0.714889968290738,1.08524321078289,0,0,0,0,1.20575750823834,0,0.299918973546171,0,1.50677127429638,0,0,1.14861935834114,0,0,0.61642896765115,0.358121926479791,0.112085143993527,0,0.431255149719035,0,0.254094624222463,0,1.54657762555539,0,1.27587750330633,0,0,0.414415513436035,0.24538298343828,1.50051156317903,0.271265023699736,0.623912584592421,0.713715955188647,0.157702415033935,0.117141414992713,0,2.27407504055985,1.03473071292505,0.664225598535437,0,0.521301686808497,0.783204629850962,0.686286847621712,0,0.215714200818617,0.533637789017222,1.21251028578504,1.66435439510497,1.81434175997808,0,0.153461973288062,0.841980283299221,0.512556597022804,1.02341449813341,0.321707842287215,0,0.308419387605311,0,0.0821271560138091,1.55776328755086,0.116210378459959,0.846016147141356,0.200506470303285,0.368323955743585,0.34444334449382,0.910455840033585,0.655622074797121,0,0.308061348417659,0,0,0.316654886678627,1.13733384070897,0,0.431831832204279,1.54227252690289,0.270946437543853,0.501689773854853,0.254876273045038,0,0.223874754722178,0,0.261435451024901,0.769350375349168,0,0,0.206082023295445,0.183138929636687,0.165018999841176,0,0,0,0.96670718292122,0.154048617114644,0.307007349452259,0.137836572484531,0.429680979473094,0.290033387828457,0.0852266274161009,0.623224249527161,0.165284915360978,0.192190067365106,0,0.10115778085555,0.464845549297286,0.94443704049192,0,0,0,0,0.37064843820784,0.286249773483982,0,0.632758849437452,0.38126038784765,0,0,0.318203247925937,0.78494864019923,0,0.274537029736055,0.353437207037059,0,0,0,0,0.487426979262569,1.05650146756755,0.409499734223957,0.707027159768564,0,1.10273068709225,1.32687795048244,0,0,0,0.202910376962704,0.30982349809975,0,0.286822704408103,0.0982490410131212,0,0,0.633322905892992,0.329294892959902,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0.764637207142375,0.569647187174163,0.238231775457789,0,0.648473311192717,0,1.58625035258854,0.213648142254946,0,0,0,0,0.0711418433484141,0.318852545457645,0,0.191505370132367,0,0,0.561594356226918,0,0.156679895773023,0,0.338583555603207,0,0.201799707191048,0,0,0.921722292925374,0,0.333698283423817,0,0,0,0.270455678475983,0,0,0.18714054040822,0.293016358543788,0,0.111443384277478,0,0,0.593929361665277,0,0.994147647766298,0.140669416410513,0.111308705022906,0,0,0.398495976502139,0,0,0.20453736500431,0.123084805461069,0.311039587661807,0.089868351147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| ||
|short_description=p2@PIGS | |short_description=p2@PIGS | ||
}} | }} |
Latest revision as of 06:19, 19 September 2015
Short description: | p2@PIGS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PIGS_5end |
Coexpression cluster: | NA |
Association with transcript: | -3bp_to_AK025825_5end |
EntrezGene: | PIGS |
HGNC: | 14937 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 5.23e-15 | 3 |
extraembryonic cell | 6.72e-11 | 19 |
smooth muscle cell of the subclavian artery | 1.18e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
placenta | 2.24e-11 | 4 |
allantois | 2.24e-11 | 4 |
chorion | 6.35e-11 | 7 |
thoracic segment blood vessel | 1.18e-08 | 5 |
subclavian artery | 1.18e-08 | 5 |
extraembryonic structure | 1.96e-08 | 24 |
extraembryonic membrane | 4.83e-08 | 14 |
membranous layer | 4.83e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.57e-07 | 3 |
leiomyoma | 1.57e-07 | 3 |