FFCP PHASE1:Hg19::chr19:13320413..13320428,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=B3SZS3 | |UniProt=B3SZS3 | ||
|association_with_transcript=-156bp_to_EU016197_5end | |association_with_transcript=-156bp_to_EU016197_5end | ||
|cluster_id=chr19:13320413..13320428,- | |||
|description=CAGE_peak_1_at_EU016197_5end | |description=CAGE_peak_1_at_EU016197_5end | ||
|id=chr19:13320413..13320428,- | |id=chr19:13320413..13320428,- | ||
|ontology_enrichment_celltype=CL:0000945!8.07e-26!24;CL:0000826!8.07e-26!24;CL:0000236!1.03e-20!14;CL:0000542!4.84e-11!53;CL:0000051!4.84e-11!53;CL:0000838!8.00e-10!52;CL:1000507!2.80e-08!12;CL:1000494!2.80e-08!12;CL:0002087!1.61e-07!119;CL:1000415!3.55e-07!2;CL:0000785!7.92e-07!2;CL:0000955!7.92e-07!2;CL:0000818!7.92e-07!2;CL:0000954!7.92e-07!2;CL:0000816!7.92e-07!2 | |ontology_enrichment_celltype=CL:0000945!8.07e-26!24;CL:0000826!8.07e-26!24;CL:0000236!1.03e-20!14;CL:0000542!4.84e-11!53;CL:0000051!4.84e-11!53;CL:0000838!8.00e-10!52;CL:1000507!2.80e-08!12;CL:1000494!2.80e-08!12;CL:0002087!1.61e-07!119;CL:1000415!3.55e-07!2;CL:0000785!7.92e-07!2;CL:0000955!7.92e-07!2;CL:0000818!7.92e-07!2;CL:0000954!7.92e-07!2;CL:0000816!7.92e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000945;8.01e-51;24!CL:0000236;7.64e-39;13!CL:0000542;5.61e-15;53!CL:0000946;1.07e-11;1!CL:0000786;1.07e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,9.52e-51,24;CL:0000826,9.52e-51,24;CL:0000236,9.75e-47,14;CL:0000838,1.18e-22,52;CL:0000542,3.38e-22,53;CL:0000051,3.38e-22,53;CL:0000946,1.81e-11,1;CL:0000786,1.81e-11,1;CL:0000980,1.81e-11,1;CL:0002087,3.57e-11,115;CL:0002031,1.23e-10,120;CL:0000738,3.47e-09,136;CL:0002032,1.73e-07,161;CL:0000837,1.73e-07,161;CL:0000037,4.20e-07,168 | |||
|ontology_enrichment_development_v019=CL:0000051;5.61e-15;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:6193;4.78e-12;1!DOID:4929;8.93e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,4.06e-12,1;DOID:4929,8.93e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0009773!2.80e-08!12;UBERON:0001231!2.80e-08!12;UBERON:0004810!2.80e-08!12;UBERON:0003887!1.30e-07!21;UBERON:0006554!8.31e-07!44 | |ontology_enrichment_uberon=UBERON:0009773!2.80e-08!12;UBERON:0001231!2.80e-08!12;UBERON:0004810!2.80e-08!12;UBERON:0003887!1.30e-07!21;UBERON:0006554!8.31e-07!44 | ||
|ontology_enrichment_uberon_v019=UBERON:0004913;2.63e-12;1!UBERON:0003703;2.63e-12;1!UBERON:0001174;2.63e-12;1!UBERON:0004914;2.63e-12;1!UBERON:0002294;4.26e-07;7!UBERON:0001173;4.26e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,2.63e-12,1;UBERON:0003703,2.63e-12,1;UBERON:0001174,2.63e-12,1;UBERON:0004914,2.63e-12,1 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60468152070698,1.14940825229924,1.18066171970519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.612167784741805,0.320929027076094,0,0,0,0,0,0.56738522469114,0,0,0.521482918420201,0,1.21079900526674,0.368277635987565,0,0,0,0,0,0,0,0,0.19891667719909,0,0,3.27683166757279,0.889509253863555,1.28019066769952,3.2031678962881,1.14950487990897,1.98313461835459,0,2.27685187643779,1.17447437874188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0.451199612907412,0,1.56869953835371,0,0.105551628892876,0,0,0,0,0,0.501689773854853,0.254876273045038,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0.43050537267123,0,0,0.229723400206959,0,0,0,0.476463550915578,0.411362273086194,0,0,0,0.534120355637366,0,0,0.557409525377156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.246169610922139,0,0,0,0,0.197286811273867,2.3948309234694,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57979048707425,0,0,0,0,0,0,0,0,0.0633107959558787,0.391102765469606,2.24444696704294,0,0,1.15272333723285,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.8363725695034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03710588800201,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0.45120521581504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0.217716747896961,0,0.336760265072938,0.0717222053926763,0,0,3.30854772220918,0,0,0,0,0,0,0.201273793591026,0.961705476909699 | ||
|short_description=p1@EU016197 | |short_description=p1@EU016197 | ||
}} | }} |
Latest revision as of 00:56, 16 September 2015
Short description: | p1@EU016197 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EU016197_5end |
Coexpression cluster: | NA |
Association with transcript: | -156bp_to_EU016197_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 9.52e-51 | 24 |
pro-B cell | 9.52e-51 | 24 |
B cell | 9.75e-47 | 14 |
lymphoid lineage restricted progenitor cell | 1.18e-22 | 52 |
lymphocyte | 3.38e-22 | 53 |
common lymphoid progenitor | 3.38e-22 | 53 |
antibody secreting cell | 1.81e-11 | 1 |
plasma cell | 1.81e-11 | 1 |
plasmablast | 1.81e-11 | 1 |
nongranular leukocyte | 3.57e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 1.23e-10 | 120 |
leukocyte | 3.47e-09 | 136 |
hematopoietic oligopotent progenitor cell | 1.73e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.73e-07 | 161 |
hematopoietic stem cell | 4.20e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 2.63e-12 | 1 |
extrahepatic bile duct | 2.63e-12 | 1 |
common bile duct | 2.63e-12 | 1 |
duodenal papilla | 2.63e-12 | 1 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 4.06e-12 | 1 |
tubular adenocarcinoma | 8.93e-07 | 2 |