FFCP PHASE1:Hg19::chr10:21460261..21460265,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
|||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:21460261..21460265,- | |||
|description=CAGE_peak_at_chr10:21460261..21460265,- | |description=CAGE_peak_at_chr10:21460261..21460265,- | ||
|id=chr10:21460261..21460265,- | |id=chr10:21460261..21460265,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.05e-25;3!UBERON:0000358;1.08e-19;1!UBERON:0010122;2.60e-10;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.20e-29!115;UBERON:0001049!8.65e-27!57;UBERON:0005068!8.65e-27!57;UBERON:0006241!8.65e-27!57;UBERON:0007135!8.65e-27!57;UBERON:0002616!1.33e-23!59;UBERON:0001893!2.11e-23!34;UBERON:0002780!1.12e-22!41;UBERON:0001890!1.12e-22!41;UBERON:0006240!1.12e-22!41;UBERON:0002791!4.99e-22!33;UBERON:0003080!5.65e-22!42;UBERON:0002020!2.72e-21!34;UBERON:0003528!2.72e-21!34;UBERON:0003075!3.29e-21!86;UBERON:0007284!3.29e-21!86;UBERON:0002346!4.64e-21!90;UBERON:0001869!2.90e-20!32;UBERON:0000955!6.61e-20!69;UBERON:0006238!6.61e-20!69;UBERON:0001017!6.26e-18!82;UBERON:0005743!6.37e-18!86;UBERON:0000153!3.55e-17!129;UBERON:0007811!3.55e-17!129;UBERON:0000033!1.71e-16!123;UBERON:0000073!2.15e-16!94;UBERON:0001016!2.15e-16!94;UBERON:0002619!8.24e-15!22;UBERON:0000956!1.44e-14!25;UBERON:0000203!1.44e-14!25;UBERON:0003056!2.51e-14!61;UBERON:0000924!2.66e-14!173;UBERON:0006601!2.66e-14!173;UBERON:0004121!3.86e-14!169;UBERON:0001950!5.22e-14!20;UBERON:0000200!2.20e-08!6;UBERON:0002420!2.23e-08!9;UBERON:0007245!2.23e-08!9;UBERON:0010009!2.23e-08!9;UBERON:0010011!2.23e-08!9;UBERON:0000454!2.23e-08!9;UBERON:0002308!2.35e-08!9;UBERON:0000125!2.35e-08!9;UBERON:0009663!9.83e-08!7;UBERON:0004111!1.40e-07!241;UBERON:0002021!2.81e-07!5;UBERON:0000064!3.16e-07!219;UBERON:0003978!5.75e-07!3;UBERON:0009751!5.75e-07!3;UBERON:0000946!5.75e-07!3;UBERON:0002523!5.75e-07!3;UBERON:0005983!5.75e-07!3;UBERON:0002165!5.75e-07!3;UBERON:0002062!5.75e-07!3;UBERON:0007280!5.75e-07!3;UBERON:0002771!5.86e-07!3 | |ontology_enrichment_uberon=UBERON:0007023!5.20e-29!115;UBERON:0001049!8.65e-27!57;UBERON:0005068!8.65e-27!57;UBERON:0006241!8.65e-27!57;UBERON:0007135!8.65e-27!57;UBERON:0002616!1.33e-23!59;UBERON:0001893!2.11e-23!34;UBERON:0002780!1.12e-22!41;UBERON:0001890!1.12e-22!41;UBERON:0006240!1.12e-22!41;UBERON:0002791!4.99e-22!33;UBERON:0003080!5.65e-22!42;UBERON:0002020!2.72e-21!34;UBERON:0003528!2.72e-21!34;UBERON:0003075!3.29e-21!86;UBERON:0007284!3.29e-21!86;UBERON:0002346!4.64e-21!90;UBERON:0001869!2.90e-20!32;UBERON:0000955!6.61e-20!69;UBERON:0006238!6.61e-20!69;UBERON:0001017!6.26e-18!82;UBERON:0005743!6.37e-18!86;UBERON:0000153!3.55e-17!129;UBERON:0007811!3.55e-17!129;UBERON:0000033!1.71e-16!123;UBERON:0000073!2.15e-16!94;UBERON:0001016!2.15e-16!94;UBERON:0002619!8.24e-15!22;UBERON:0000956!1.44e-14!25;UBERON:0000203!1.44e-14!25;UBERON:0003056!2.51e-14!61;UBERON:0000924!2.66e-14!173;UBERON:0006601!2.66e-14!173;UBERON:0004121!3.86e-14!169;UBERON:0001950!5.22e-14!20;UBERON:0000200!2.20e-08!6;UBERON:0002420!2.23e-08!9;UBERON:0007245!2.23e-08!9;UBERON:0010009!2.23e-08!9;UBERON:0010011!2.23e-08!9;UBERON:0000454!2.23e-08!9;UBERON:0002308!2.35e-08!9;UBERON:0000125!2.35e-08!9;UBERON:0009663!9.83e-08!7;UBERON:0004111!1.40e-07!241;UBERON:0002021!2.81e-07!5;UBERON:0000064!3.16e-07!219;UBERON:0003978!5.75e-07!3;UBERON:0009751!5.75e-07!3;UBERON:0000946!5.75e-07!3;UBERON:0002523!5.75e-07!3;UBERON:0005983!5.75e-07!3;UBERON:0002165!5.75e-07!3;UBERON:0002062!5.75e-07!3;UBERON:0007280!5.75e-07!3;UBERON:0002771!5.86e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000073;3.88e-18;53!UBERON:0002616;3.88e-18;53!UBERON:0000349;2.51e-15;5!UBERON:0004733;3.30e-14;12!UBERON:0002028;3.30e-14;12!UBERON:0002780;3.43e-14;41!UBERON:0001890;3.43e-14;41!UBERON:0004732;3.63e-13;13!UBERON:0002037;4.39e-13;6!UBERON:0002619;7.83e-13;22!UBERON:0002791;1.35e-12;32!UBERON:0001869;1.35e-12;32!UBERON:0000956;2.16e-11;25!UBERON:0000203;2.16e-11;25!UBERON:0000007;1.57e-10;2!UBERON:0003528;1.65e-10;34!UBERON:0002020;1.65e-10;34!UBERON:0001893;1.98e-10;34!UBERON:0001876;2.60e-10;2!UBERON:0001873;2.60e-10;2!UBERON:0001954;2.60e-10;2!UBERON:0002702;2.60e-10;2!UBERON:0003022;2.60e-10;2!UBERON:0002421;2.60e-10;2!UBERON:0002600;2.60e-10;2!UBERON:0001017;1.04e-09;75!UBERON:0000955;2.97e-09;68!UBERON:0002680;4.90e-09;9!UBERON:0001895;4.90e-09;9!UBERON:0002420;6.10e-09;9!UBERON:0007245;6.10e-09;9!UBERON:0010009;6.10e-09;9!UBERON:0010011;6.10e-09;9!UBERON:0000454;6.10e-09;9!UBERON:0001950;2.54e-08;20!UBERON:0001016;2.69e-07;83!UBERON:0001896;2.71e-07;3!UBERON:0001870;2.71e-07;3!UBERON:0005383;2.71e-07;3!UBERON:0005290;2.71e-07;3!UBERON:0005382;2.71e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.33e-26,53;UBERON:0002616,2.33e-26,53;UBERON:0001049,5.97e-25,56;UBERON:0005068,5.97e-25,56;UBERON:0006241,5.97e-25,56;UBERON:0007135,5.97e-25,56;UBERON:0000955,3.10e-20,68;UBERON:0006238,3.10e-20,68;UBERON:0001017,5.47e-17,81;UBERON:0003075,5.47e-17,82;UBERON:0007284,5.47e-17,82;UBERON:0002346,3.49e-16,86;UBERON:0000349,2.70e-15,5;UBERON:0001016,2.83e-15,89;UBERON:0002780,2.83e-15,41;UBERON:0001890,2.83e-15,41;UBERON:0003080,2.83e-15,41;UBERON:0006240,2.83e-15,41;UBERON:0004733,3.45e-14,12;UBERON:0002028,3.45e-14,12;UBERON:0007277,3.45e-14,12;UBERON:0002791,1.15e-13,32;UBERON:0001869,1.15e-13,32;UBERON:0010371,2.58e-13,104;UBERON:0004732,3.78e-13,13;UBERON:0002037,4.52e-13,6;UBERON:0006215,4.52e-13,6;UBERON:0003528,6.84e-13,34;UBERON:0002020,6.84e-13,34;UBERON:0001893,6.84e-13,34;UBERON:0002619,8.59e-13,22;UBERON:0007023,2.96e-12,114;UBERON:0003076,1.76e-11,15;UBERON:0003057,1.76e-11,15;UBERON:0000956,2.34e-11,25;UBERON:0000203,2.34e-11,25;UBERON:0000007,1.72e-10,2;UBERON:0001954,2.07e-10,2;UBERON:0003022,2.07e-10,2;UBERON:0002421,2.07e-10,2;UBERON:0002600,2.07e-10,2;UBERON:0010314,2.20e-10,132;UBERON:0001873,2.27e-10,2;UBERON:0010122,2.27e-10,2;UBERON:0003056,2.62e-10,61;UBERON:0002702,3.27e-10,2;UBERON:0001876,3.58e-10,2;UBERON:0004121,1.05e-09,171;UBERON:0000924,1.05e-09,171;UBERON:0006601,1.05e-09,171;UBERON:0002680,5.00e-09,9;UBERON:0001895,5.00e-09,9;UBERON:0010092,5.00e-09,9;UBERON:0002420,6.61e-09,9;UBERON:0007245,6.61e-09,9;UBERON:0010009,6.61e-09,9;UBERON:0010011,6.61e-09,9;UBERON:0000454,6.61e-09,9;UBERON:0001950,2.92e-08,20;UBERON:0005383,2.47e-07,3;UBERON:0005382,2.47e-07,3;UBERON:0001896,2.79e-07,3;UBERON:0005290,2.79e-07,3;UBERON:0010096,2.79e-07,3;UBERON:0011216,2.97e-07,223;UBERON:0001870,3.16e-07,3;UBERON:0000025,6.11e-07,192;UBERON:0004111,8.76e-07,240 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0.082509499920588,0,0,0,0,0,0,0,0.107420244868274,0,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.568272293612826,0,0,0.614321404198464,0,1.1253553312841,0,0,0,0.19924798825107,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0.185536196323703,0,0,0.0874599999961957,0,0.1137934482855,0,0,0.344743373241465,0,0,0,1.32656082487949,0,2.98564001814306,1.18219047581419,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0,0.471807930864739,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0.225980740780532,0,0,0.316553979779393,0,0.0801588202515337,0,0,0,0.229073192331831,0.171594997861965,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0.279282401272254,0.458320848023367,0.717873024576814,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,1.63444087333891,0,0,0,0,0,0.425246896606173,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0.5085370753095,0,0,0,0,0,0,0,0,0,0,0.79339561045614,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0.471162288750703,0,0.122026264901963,1.1267183763585,0,1.22021956690538,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521988583930423,0,0,0,0,0,0.438568099157414,0,0.38582807654183,0,0.256241518587947,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0.123935764259002,0,0,0,0,0,0,0.449604575675217,0,1.27707087245721,0.41023272848151,0.504143392443436,0.484100767249525,0.484426936895553,0,0.392590874004102,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.270150338473579,0,0.413373593002368,0.380494861163441,0,0.548257766857182,0,0,0,0,0,0,2.04895972216168,0.266107110487916,0,0,0.203909198930495,0.328863867814245,0,0,0.078493092850514,0.471346769748006,0,0.913158720509496,0,0,0.285906176706625,0,0,0,0,0,0.3414369541879,0,1.72090943528111,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0.594092800654172,0,0,0,0,0,0,0,0,0,0,0.860037498908708,0.788857810965923,0,0.436350690340377,0,0,0,0,0.378499274505237,0,0,0,0,0.18378979906969,0,0,0,0,0.724030971033267,0.426467963801962,0,0,0.0620747142958579,0,0.572824424503484,0,0.217716747896961,0.342233301085281,0.134704106029175,0.0717222053926763,0.332660356546013,0,0,0,0,2.34640942403454,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0.082509499920588,0,0,0,0,0,0,0,0.107420244868274,0,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.568272293612826,0,0,0.614321404198464,0,1.1253553312841,0,0,0,0.19924798825107,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0.185536196323703,0,0,0.0874599999961957,0,0.1137934482855,0,0,0.344743373241465,0,0,0,1.32656082487949,0,2.98564001814306,1.18219047581419,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0,0.471807930864739,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0.225980740780532,0,0,0.316553979779393,0,0.0801588202515337,0,0,0,0.229073192331831,0.171594997861965,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0.279282401272254,0.458320848023367,0.717873024576814,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,1.63444087333891,0,0,0,0,0,0.425246896606173,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0.5085370753095,0,0,0,0,0,0,0,0,0,0,0.79339561045614,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0.471162288750703,0,0.122026264901963,1.1267183763585,0,1.22021956690538,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521988583930423,0,0,0,0,0,0.438568099157414,0,0.38582807654183,0,0.256241518587947,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0.123935764259002,0,0,0,0,0,0,0.449604575675217,0,1.27707087245721,0.41023272848151,0.504143392443436,0.484100767249525,0.484426936895553,0,0.392590874004102,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.270150338473579,0,0.413373593002368,0.380494861163441,0,0.548257766857182,0,0,0,0,0,0,2.04895972216168,0.266107110487916,0,0,0.203909198930495,0.328863867814245,0,0,0.078493092850514,0.471346769748006,0,0.913158720509496,0,0,0.285906176706625,0,0,0,0,0,0.3414369541879,0,1.72090943528111,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0.594092800654172,0,0,0,0,0,0,0,0,0,0,0.860037498908708,0.788857810965923,0,0.436350690340377,0,0,0,0,0.378499274505237,0,0,0,0,0.18378979906969,0,0,0,0,0.724030971033267,0.426467963801962,0,0,0.0620747142958579,0,0.572824424503484,0,0.217716747896961,0.342233301085281,0.134704106029175,0.0717222053926763,0.332660356546013,0,0,0,0,2.34640942403454,0,0,0,0,0 | ||
|short_description=p@chr10:21460261..21460265,- | |short_description=p@chr10:21460261..21460265,- | ||
}} | }} |
Latest revision as of 12:30, 23 July 2015
Short description: | p@chr10:21460261..21460265, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:21460261..21460265, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data