FFCP PHASE1:Hg19::chr1:19536786..19536797,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:19536786..19536797,-
|short_description=p3@UBR4
|description=CAGE_peak_3_at_UBR4_5end
|association_with_transcript=-16bp_to_ENST00000375254_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23352 | |EntrezGene=23352 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30313 | |HGNC=30313 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T4S7 | |UniProt=Q5T4S7 | ||
|association_with_transcript=-16bp_to_ENST00000375254_5end | |||
|cluster_id=chr1:19536786..19536797,- | |||
|description=CAGE_peak_3_at_UBR4_5end | |||
|id=chr1:19536786..19536797,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!1.99e-07!69;UBERON:0006238!1.99e-07!69;UBERON:0007023!3.25e-07!115;UBERON:0002616!4.89e-07!59;UBERON:0001049!5.79e-07!57;UBERON:0005068!5.79e-07!57;UBERON:0006241!5.79e-07!57;UBERON:0007135!5.79e-07!57;UBERON:0002619!9.33e-07!22 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000955,2.97e-07,68;UBERON:0006238,2.97e-07,68;UBERON:0007023,3.75e-07,114;UBERON:0000073,7.14e-07,53;UBERON:0002616,7.14e-07,53;UBERON:0001049,8.72e-07,56;UBERON:0005068,8.72e-07,56;UBERON:0006241,8.72e-07,56;UBERON:0007135,8.72e-07,56;UBERON:0002619,9.32e-07,22 | |||
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| ||
|short_description=p3@UBR4 | |||
}} | }} |
Latest revision as of 11:58, 19 September 2015
Short description: | p3@UBR4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_UBR4_5end |
Coexpression cluster: | NA |
Association with transcript: | -16bp_to_ENST00000375254_5end |
EntrezGene: | UBR4 |
HGNC: | 30313 |
UniProt: | Q5T4S7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brain | 2.97e-07 | 68 |
future brain | 2.97e-07 | 68 |
adult organism | 3.75e-07 | 114 |
regional part of nervous system | 7.14e-07 | 53 |
regional part of brain | 7.14e-07 | 53 |
neural tube | 8.72e-07 | 56 |
neural rod | 8.72e-07 | 56 |
future spinal cord | 8.72e-07 | 56 |
neural keel | 8.72e-07 | 56 |
regional part of cerebral cortex | 9.32e-07 | 22 |