FFCP PHASE1:Hg19::chr1:205905031..205905037,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:205905031..205905037,-
|short_description=p4@SLC26A9
|description=CAGE_peak_4_at_SLC26A9_5end
|association_with_transcript=-81bp_to_ENST00000340781_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=115019 | |EntrezGene=115019 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14469 | |HGNC=14469 | ||
|TSSclassifier=strong | |||
|UniProt=Q7LBE3 | |UniProt=Q7LBE3 | ||
|association_with_transcript=-81bp_to_ENST00000340781_5end | |||
|cluster_id=chr1:205905031..205905037,- | |||
|coexpression_cluster_id=C133 | |||
|description=CAGE_peak_4_at_SLC26A9_5end | |||
|id=chr1:205905031..205905037,- | |||
|ontology_enrichment_celltype=CL:0001014!7.54e-13!2;CL:0001016!7.54e-13!2 | |||
|ontology_enrichment_celltype_v019=CL:0000312;3.26e-11;5!CL:0000240;1.44e-09;6!CL:0000311;1.44e-09;6!CL:0000079;1.44e-09;6!CL:0000237;1.44e-09;6!CL:0000362;8.37e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000312,3.60e-11,5;CL:0000240,1.57e-09,6;CL:0000311,1.57e-09,6;CL:0000079,1.57e-09,6;CL:0000237,1.57e-09,6;CL:0000036,1.57e-09,6;CL:0000357,1.57e-09,6;CL:0000114,1.57e-09,6;CL:0000362,8.85e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0008814;7.14e-26;2!UBERON:0010056;7.14e-26;2!CL:0000357;1.44e-09;6!CL:0000114;1.44e-09;6 | |||
|ontology_enrichment_disease=DOID:3493!1.28e-12!2;DOID:3151!5.14e-07!1;DOID:3149!5.14e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:3493;4.32e-26;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,4.32e-26,2 | |||
|ontology_enrichment_uberon=UBERON:0001041!3.68e-10!98;UBERON:0001042!1.51e-09!10;UBERON:0009145!1.51e-09!10;UBERON:0000077!2.84e-09!130;UBERON:0001723!7.20e-09!3;UBERON:0001033!7.20e-09!3;UBERON:0010056!7.20e-09!3;UBERON:0006562!1.09e-08!11;UBERON:0001007!3.20e-08!155;UBERON:0001555!3.20e-08!155;UBERON:0007026!3.20e-08!155;UBERON:0000078!4.25e-08!18;UBERON:0004921!5.05e-08!129;UBERON:0004185!5.05e-08!129;UBERON:0002372!1.55e-07!1;UBERON:0001961!1.55e-07!1;UBERON:0001744!1.55e-07!1;UBERON:0001735!1.55e-07!1;UBERON:0004119!3.04e-07!169;UBERON:0000925!3.04e-07!169;UBERON:0006595!3.04e-07!169;UBERON:0000989!3.40e-07!1;UBERON:0008811!3.40e-07!1;UBERON:0006258!3.40e-07!1;UBERON:0005876!3.40e-07!1;UBERON:0004874!3.40e-07!1;UBERON:0007029!3.60e-07!1;UBERON:0001736!3.82e-07!1;UBERON:0006298!3.82e-07!1;UBERON:0004913!5.45e-07!1;UBERON:0003703!5.45e-07!1;UBERON:0001174!5.45e-07!1;UBERON:0004914!5.45e-07!1;UBERON:0001154!5.78e-07!1;UBERON:0001153!5.78e-07!1;UBERON:0000166!6.71e-07!21;UBERON:0001301!7.29e-07!1;UBERON:0001043!9.76e-07!4;UBERON:0009143!9.76e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;3.99e-50;1!UBERON:0001961;3.99e-50;1!UBERON:0001744;3.99e-50;1!UBERON:0001042;3.99e-50;1!UBERON:0001735;3.99e-50;1!UBERON:0006562;7.14e-26;2!UBERON:0001723;9.45e-18;3!UBERON:0001033;9.45e-18;3!UBERON:0000165;4.06e-08;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,2.42e-50,1;UBERON:0001961,2.42e-50,1;UBERON:0001744,2.42e-50,1;UBERON:0001735,2.42e-50,1;UBERON:0001042,8.54e-21,10;UBERON:0009145,8.54e-21,10;UBERON:0006562,5.14e-19,11;UBERON:0001723,9.46e-18,3;UBERON:0001033,9.46e-18,3;UBERON:0010056,9.46e-18,3;UBERON:0001557,1.72e-11,19;UBERON:0000166,4.53e-10,22;UBERON:0000165,6.91e-08,29;UBERON:0000930,6.91e-08,29 | |||
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|short_description=p4@SLC26A9 | |||
}} | }} |
Latest revision as of 04:13, 20 September 2015
Short description: | p4@SLC26A9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SLC26A9_5end |
Coexpression cluster: | C133_signet_gall_small_kidney_colon_ductal_adenocarcinoma |
Association with transcript: | -81bp_to_ENST00000340781_5end |
EntrezGene: | SLC26A9 |
HGNC: | 14469 |
UniProt: | Q7LBE3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratinocyte | 3.60e-11 | 5 |
stratified squamous epithelial cell | 1.57e-09 | 6 |
keratin accumulating cell | 1.57e-09 | 6 |
stratified epithelial cell | 1.57e-09 | 6 |
keratinizing barrier epithelial cell | 1.57e-09 | 6 |
epithelial fate stem cell | 1.57e-09 | 6 |
stratified epithelial stem cell | 1.57e-09 | 6 |
surface ectodermal cell | 1.57e-09 | 6 |
epidermal cell | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
tonsil | 2.42e-50 | 1 |
mucosa-associated lymphoid tissue | 2.42e-50 | 1 |
lymphoid tissue | 2.42e-50 | 1 |
tonsillar ring | 2.42e-50 | 1 |
chordate pharynx | 8.54e-21 | 10 |
pharyngeal region of foregut | 8.54e-21 | 10 |
pharynx | 5.14e-19 | 11 |
tongue | 9.46e-18 | 3 |
gustatory system | 9.46e-18 | 3 |
future tongue | 9.46e-18 | 3 |
upper respiratory tract | 1.72e-11 | 19 |
oral opening | 4.53e-10 | 22 |
mouth | 6.91e-08 | 29 |
stomodeum | 6.91e-08 | 29 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 4.32e-26 | 2 |