FFCP PHASE1:Hg19::chr12:72451150..72451167,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000548885_5end | |association_with_transcript=0bp_to_ENST00000548885_5end | ||
|cluster_id=chr12:72451150..72451167,- | |||
|coexpression_cluster_id=C15 | |coexpression_cluster_id=C15 | ||
|description=CAGE_peak_2_at_ENST00000548885_5end | |description=CAGE_peak_2_at_ENST00000548885_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000077!6.63e-32!19;CL:0000349!5.62e-20!3;CL:0002577!5.62e-20!3;CL:0000076!9.78e-15!62;CL:0002097!3.99e-14!2;CL:0002537!1.87e-12!5;CL:0000174!1.04e-09!3;CL:0000213!1.81e-09!57;CL:0000215!1.81e-09!57;CL:0002166!2.53e-09!3;CL:0002541!3.26e-09!3;CL:0000066!1.63e-08!254 | |ontology_enrichment_celltype=CL:0000077!6.63e-32!19;CL:0000349!5.62e-20!3;CL:0002577!5.62e-20!3;CL:0000076!9.78e-15!62;CL:0002097!3.99e-14!2;CL:0002537!1.87e-12!5;CL:0000174!1.04e-09!3;CL:0000213!1.81e-09!57;CL:0000215!1.81e-09!57;CL:0002166!2.53e-09!3;CL:0002541!3.26e-09!3;CL:0000066!1.63e-08!254 | ||
|ontology_enrichment_celltype_v019=CL:0002577;1.14e-24;3!CL:0000077;9.48e-24;19!CL:0002537;1.30e-15;5!CL:0000349;1.50e-15;19!CL:0002097;1.72e-10;2!CL:0000174;2.05e-07;3!CL:0000076;2.65e-07;63!CL:0002166;2.97e-07;3 | |ontology_enrichment_celltype_v019=CL:0002577;1.14e-24;3!CL:0000077;9.48e-24;19!CL:0002537;1.30e-15;5!CL:0000349;1.50e-15;19!CL:0002097;1.72e-10;2!CL:0000174;2.05e-07;3!CL:0000076;2.65e-07;63!CL:0002166;2.97e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002577,1.29e-24,3;CL:0000077,9.94e-24,19;CL:0002537,1.30e-15,5;CL:0000349,1.55e-15,19;CL:0002097,1.72e-10,2;CL:0000076,3.35e-10,63;CL:0000213,7.67e-08,58;CL:0000215,7.67e-08,58;CL:0000174,2.05e-07,3;CL:0002166,2.63e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!3.30e-28!14;UBERON:0000158!3.30e-28!14;UBERON:0003124!1.63e-22!7;UBERON:0000478!5.62e-16!24;UBERON:0001987!3.99e-15!4;UBERON:0004340!3.99e-15!4;UBERON:0002369!1.04e-09!3;UBERON:0001235!1.04e-09!3;UBERON:0006858!1.04e-09!3;UBERON:0000476!3.26e-09!3;UBERON:0000920!3.26e-09!3;UBERON:0000305!5.00e-09!7;UBERON:0004871!5.94e-08!8;UBERON:0001282!1.91e-07!1;UBERON:0009842!1.91e-07!1;UBERON:0003704!1.91e-07!1;UBERON:0001171!1.91e-07!1;UBERON:0001172!1.91e-07!1;UBERON:0001708!3.38e-07!4;UBERON:0001704!3.38e-07!4;UBERON:0002394!4.76e-07!4;UBERON:0003928!4.76e-07!4 | |ontology_enrichment_uberon=UBERON:0005631!3.30e-28!14;UBERON:0000158!3.30e-28!14;UBERON:0003124!1.63e-22!7;UBERON:0000478!5.62e-16!24;UBERON:0001987!3.99e-15!4;UBERON:0004340!3.99e-15!4;UBERON:0002369!1.04e-09!3;UBERON:0001235!1.04e-09!3;UBERON:0006858!1.04e-09!3;UBERON:0000476!3.26e-09!3;UBERON:0000920!3.26e-09!3;UBERON:0000305!5.00e-09!7;UBERON:0004871!5.94e-08!8;UBERON:0001282!1.91e-07!1;UBERON:0009842!1.91e-07!1;UBERON:0003704!1.91e-07!1;UBERON:0001171!1.91e-07!1;UBERON:0001172!1.91e-07!1;UBERON:0001708!3.38e-07!4;UBERON:0001704!3.38e-07!4;UBERON:0002394!4.76e-07!4;UBERON:0003928!4.76e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0001987;8.88e-19;4!UBERON:0000478;2.17e-12;24!UBERON:0000305;1.97e-11;7!UBERON:0005631;2.82e-08;10!UBERON:0000158;2.82e-08;10!UBERON:0002369;2.05e-07;3!UBERON:0001235;2.05e-07;3!UBERON:0006858;2.05e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0001987;8.88e-19;4!UBERON:0000478;2.17e-12;24!UBERON:0000305;1.97e-11;7!UBERON:0005631;2.82e-08;10!UBERON:0000158;2.82e-08;10!UBERON:0002369;2.05e-07;3!UBERON:0001235;2.05e-07;3!UBERON:0006858;2.05e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,6.28e-21,14;UBERON:0000158,6.28e-21,14;UBERON:0001987,9.72e-19,4;UBERON:0004340,9.72e-19,4;UBERON:0000478,2.23e-12,24;UBERON:0000305,1.97e-11,7;UBERON:0003124,3.85e-11,7;UBERON:0004871,4.03e-10,8;UBERON:0002369,2.05e-07,3;UBERON:0001235,2.05e-07,3;UBERON:0006858,2.05e-07,3 | |||
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|short_description=p2@ENST00000548885 | |short_description=p2@ENST00000548885 | ||
}} | }} |
Latest revision as of 12:16, 24 July 2015
Short description: | p2@ENST00000548885 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000548885_5end |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | 0bp_to_ENST00000548885_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 1.29e-24 | 3 |
mesothelial cell | 9.94e-24 | 19 |
amnion mesenchymal stem cell | 1.30e-15 | 5 |
extraembryonic cell | 1.55e-15 | 19 |
cortical cell of adrenal gland | 1.72e-10 | 2 |
squamous epithelial cell | 3.35e-10 | 63 |
lining cell | 7.67e-08 | 58 |
barrier cell | 7.67e-08 | 58 |
steroid hormone secreting cell | 2.05e-07 | 3 |
epithelial cell of Malassez | 2.63e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 6.28e-21 | 14 |
membranous layer | 6.28e-21 | 14 |
placenta | 9.72e-19 | 4 |
allantois | 9.72e-19 | 4 |
extraembryonic structure | 2.23e-12 | 24 |
amnion | 1.97e-11 | 7 |
chorion | 3.85e-11 | 7 |
somatic layer of lateral plate mesoderm | 4.03e-10 | 8 |
adrenal gland | 2.05e-07 | 3 |
adrenal cortex | 2.05e-07 | 3 |
adrenal/interrenal gland | 2.05e-07 | 3 |