FFCP PHASE1:Hg19::chr9:98271426..98271454,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5727 | |EntrezGene=5727 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9585 | |HGNC=9585 | ||
|TSSclassifier=strong | |||
|UniProt=Q13635 | |UniProt=Q13635 | ||
|association_with_transcript=-483bp_to_ENST00000331920_5end | |association_with_transcript=-483bp_to_ENST00000331920_5end | ||
|cluster_id=chr9:98271426..98271454,- | |||
|coexpression_cluster_id=C2948 | |coexpression_cluster_id=C2948 | ||
|description=CAGE_peak_3_at_PTCH1_5end | |description=CAGE_peak_3_at_PTCH1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002322;2.83e-11;5 | |ontology_enrichment_celltype_v019=CL:0002322;2.83e-11;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.68e-11,5 | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.27e-07;3 | |ontology_enrichment_development_v019=UBERON:0006215;3.27e-07;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0003528;2.93e-21;34!UBERON:0002020;2.93e-21;34!UBERON:0002791;3.57e-20;32!UBERON:0002619;6.45e-20;22!UBERON:0001869;1.11e-19;32!UBERON:0001893;2.32e-19;34!UBERON:0001950;2.83e-19;20!UBERON:0000956;3.18e-19;25!UBERON:0000203;3.18e-19;25!UBERON:0000073;3.92e-18;53!UBERON:0002616;3.92e-18;53!UBERON:0002780;2.48e-17;41!UBERON:0001890;2.48e-17;41!UBERON:0001017;3.64e-13;75!UBERON:0001016;2.22e-12;83!UBERON:0000955;3.05e-11;68!UBERON:0004732;9.99e-11;13!UBERON:0004733;1.92e-09;12!UBERON:0002028;1.92e-09;12!UBERON:0000922;4.54e-09;49!UBERON:0005409;5.61e-09;22!UBERON:0000160;2.92e-08;17!UBERON:0002298;8.11e-08;6!UBERON:0002420;1.14e-07;9!UBERON:0007245;1.14e-07;9!UBERON:0010009;1.14e-07;9!UBERON:0010011;1.14e-07;9!UBERON:0000454;1.14e-07;9!UBERON:0000125;1.59e-07;9!UBERON:0002308;1.59e-07;9!UBERON:0011216;1.67e-07;132!UBERON:0007023;4.52e-07;114!UBERON:0000349;5.75e-07;5!UBERON:0001871;6.14e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0003528;2.93e-21;34!UBERON:0002020;2.93e-21;34!UBERON:0002791;3.57e-20;32!UBERON:0002619;6.45e-20;22!UBERON:0001869;1.11e-19;32!UBERON:0001893;2.32e-19;34!UBERON:0001950;2.83e-19;20!UBERON:0000956;3.18e-19;25!UBERON:0000203;3.18e-19;25!UBERON:0000073;3.92e-18;53!UBERON:0002616;3.92e-18;53!UBERON:0002780;2.48e-17;41!UBERON:0001890;2.48e-17;41!UBERON:0001017;3.64e-13;75!UBERON:0001016;2.22e-12;83!UBERON:0000955;3.05e-11;68!UBERON:0004732;9.99e-11;13!UBERON:0004733;1.92e-09;12!UBERON:0002028;1.92e-09;12!UBERON:0000922;4.54e-09;49!UBERON:0005409;5.61e-09;22!UBERON:0000160;2.92e-08;17!UBERON:0002298;8.11e-08;6!UBERON:0002420;1.14e-07;9!UBERON:0007245;1.14e-07;9!UBERON:0010009;1.14e-07;9!UBERON:0010011;1.14e-07;9!UBERON:0000454;1.14e-07;9!UBERON:0000125;1.59e-07;9!UBERON:0002308;1.59e-07;9!UBERON:0011216;1.67e-07;132!UBERON:0007023;4.52e-07;114!UBERON:0000349;5.75e-07;5!UBERON:0001871;6.14e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.22e-34,56;UBERON:0005068,3.22e-34,56;UBERON:0006241,3.22e-34,56;UBERON:0007135,3.22e-34,56;UBERON:0001016,9.39e-33,89;UBERON:0001017,1.79e-32,81;UBERON:0000073,3.81e-30,53;UBERON:0002616,3.81e-30,53;UBERON:0000955,6.99e-26,68;UBERON:0006238,6.99e-26,68;UBERON:0003528,1.94e-25,34;UBERON:0002020,1.94e-25,34;UBERON:0001893,5.04e-23,34;UBERON:0003075,6.50e-23,82;UBERON:0007284,6.50e-23,82;UBERON:0002346,7.99e-23,86;UBERON:0002791,1.51e-22,32;UBERON:0001869,1.51e-22,32;UBERON:0002780,7.92e-22,41;UBERON:0001890,7.92e-22,41;UBERON:0003080,7.92e-22,41;UBERON:0006240,7.92e-22,41;UBERON:0002619,3.07e-20,22;UBERON:0001950,1.31e-19,20;UBERON:0011216,1.44e-19,223;UBERON:0000956,2.31e-19,25;UBERON:0000203,2.31e-19,25;UBERON:0007023,4.87e-19,114;UBERON:0010371,5.18e-17,104;UBERON:0003056,5.18e-15,61;UBERON:0003076,7.20e-14,15;UBERON:0003057,7.20e-14,15;UBERON:0004121,1.39e-13,171;UBERON:0000924,1.39e-13,171;UBERON:0006601,1.39e-13,171;UBERON:0010314,5.69e-12,132;UBERON:0004732,5.89e-11,13;UBERON:0004733,1.21e-09,12;UBERON:0002028,1.21e-09,12;UBERON:0007277,1.21e-09,12;UBERON:0000160,3.59e-08,17;UBERON:0002298,4.73e-08,6;UBERON:0002420,9.85e-08,9;UBERON:0007245,9.85e-08,9;UBERON:0010009,9.85e-08,9;UBERON:0010011,9.85e-08,9;UBERON:0000454,9.85e-08,9;UBERON:0005409,1.21e-07,25;UBERON:0000125,1.66e-07,9;UBERON:0002308,1.66e-07,9;UBERON:0000025,2.77e-07,192;UBERON:0001871,3.31e-07,6;UBERON:0000349,3.41e-07,5 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,1.0007329835313,0,0,0,0,0.522371256399677,0,1.39560233594486,0,0,0.866364470720326,0.331397375727916,0,0,0,0,0,0,0,0.85870796139317,0.273748850145768,1.00434111675842,0,0.0821005894499457,0,0,0,0.464448369948228,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289648807765598,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,1.70272798147026,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53316637465883,0,0,0,0,0,0,0,0,0.286836620748814,0.354668382198357,0,0,0,0.311211035399766,0,0.163461903113459,0.302714855289863,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0,0,0,0,0.247266929278557,0,1.43723628363248,0.168336113954066,0.375355559615893,0,0.438977620880838,0,0,0.113432183160021,0.179389635688862,0,0,0.300091096084402,0,0,0.18611685633159,0,0,0,0.184099797284599,0.323292113637624,0,0,0,0,0,0,4.75697453905422,3.84336328132307,5.92589108634544,3.42081481550722,4.03713361401005,0.72995471815166,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0.325808305310325,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264145302039678,0.207328115540772,0,0,0.063497894292169,0.381988425558278,0,0,0.205654985406647,0.300343057843917,1.42913216315289,0,0,0,0,0,0,0,0,0,0,0,0.428933980974443,0,0,0,1.06617584622764,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0.215627574859517,0,1.27047312111232,0,0.773288812777695,0.670065061337395,1.27587750330633,0,0,0,1.2269149171914,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0.979005787313703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0.241718899183244,0,0.0920809889358963,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,11.6293220319296,10.3961969899941,0,0,0,0,0.308097234229289,0.15350367472613,0.275673144969061,0.107420244868274,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0.359744915166629,0.54907405947211,0.117812402345686,0,0,0,0.48763373908959,0,0,0.545999645631943,0.565621727814851,0,0,0,0,0,1.9676842561399,0,0,0,0,0,0,0,0,0.329294892959902,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06824071127473,0,0,0,0,0,0,0,0,0.423347165447766,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0.18714054040822,0,1.33496573924465,0,0.284136146806413,0,0.890894042497916,0,1.9882952955326,5.20476840718897,0.111308705022906,2.30725423917463,0.844501632511974,0,0.276283915531148,1.25966373927138,1.73856760253663,0,0,0,0,0,0.493217028184668,0,0,3.87733098438087,1.39152147242777,0,0,0,0,0,0,0,1.37897349296586,0.291604613383254,0.347249989866585,0,4.10027891326387,3.05163472634166,4.20201187738654,2.95547618953547,1.97446857438575,0,0.278847488557207,0.846452843541768,0,0,0,0.108647371922008,0,0.0915975934018623,0.533034776018635,0,0.784901281975124,0,0,0.19606253431774,0,0,0,0,0,0,1.29833183845255,1.99052386215701,1.41532103205343,2.4441205797345,0,0.123563938946503,0.104421949505455,1.68502832451693,0,1.40558667435203,0,0,0.242780379534093,0.789168805698781,2.41981432097328,0.61214552326098,0.189559738885464,0.150323419414493,1.03688191397247,0,0,0,0,0,0.138674673013139,1.04135843001079,0.0979923974143777,0.174118413160805,0.698906672968121,0,0.0967563312890851,0,0,0.290967049465258,0.617792886840502,0.225980740780532,0.137041924646751,0,1.32952671507345,0,0,2.77488893161158,0.39961921916426,0.144090417154106,1.94712213482057,4.11827994868715,0,0,0,0,0.104602846312333,0,0,0,1.09524303113594,0,0,1.57732412567589,0,0.458320848023367,0,0,0,0,0.335917362433631,0,0,0,0.247247575143499,0.337017719270924,0,0,0,5.72054305668618,1.60753148465019,1.2378549293751,0.83088067605837,0,0,1.39723980313457,0,0.0788057072991982,1.25891011523995,0,0,0.191915197319445,0,0,0.5085370753095,0,0,0,0,0,0,0,0,0,2.06852730178481,1.85125642439766,0,0,0.213574825135389,2.04365596629566,1.24271716604159,0,0,0,0,0,0,0,0,0.628216385000937,0.886068179966986,0.854183854313742,2.754200475543,1.72022758707021,1.55300672151593,3.35320575883471,0.968440444553616,0.249960815924213,0.606596470166591,0.285465333544967,0,0,3.18826262943815,0,0,0,0,0,1.77962244319307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36023555307363,0,0,0.179088841081487,6.48483039038042,0,0,0,0,0.256241518587947,0.345430341731199,0.607719912354764,2.21213497842769,0,0,0,0.327609848846413,0,0,0.19998739585493,0,0,0.567515953566836,0.184105950251841,0,1.86623178009892,0.895260599125562,1.1860729253635,0.629063767423586,1.85656384926424,0.33946505990805,0,2.10690799240304,0.558644917973244,0,0.157723490002507,0,0.352675943690684,0.6124909547064,2.6976274540513,0,2.23487402680012,1.02558182120378,1.76450187355203,1.31398779682014,2.74508597574147,1.42769420259154,0.588886311006154,0.117969723347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| ||
|short_description=p3@PTCH1 | |short_description=p3@PTCH1 | ||
}} | }} |
Latest revision as of 10:54, 18 September 2015
Short description: | p3@PTCH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PTCH1_5end |
Coexpression cluster: | C2948_rhabdomyosarcoma_rectum_Saos2_teratocarcinoma_cerebellum_mesothelioma_gastrointestinal |
Association with transcript: | -483bp_to_ENST00000331920_5end |
EntrezGene: | PTCH1 |
HGNC: | 9585 |
UniProt: | Q13635 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.68e-11 | 5 |