FFCP PHASE1:Hg19::chr1:217263210..217263223,-: Difference between revisions
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|id=chr1:217263210..217263223,-
|short_description=p18@ESRRG
|description=CAGE_peak_18_at_ESRRG_5end
|association_with_transcript=-14bp_to_NM_001243505_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2104 | |EntrezGene=2104 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3474 | |HGNC=3474 | ||
|TSSclassifier=strong | |||
|UniProt=P62508 | |UniProt=P62508 | ||
|association_with_transcript=-14bp_to_NM_001243505_5end | |||
|cluster_id=chr1:217263210..217263223,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_18_at_ESRRG_5end | |||
|id=chr1:217263210..217263223,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.08e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p18@ESRRG | |||
}} | }} |
Latest revision as of 03:58, 25 September 2015
Short description: | p18@ESRRG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_ESRRG_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -14bp_to_NM_001243505_5end |
EntrezGene: | ESRRG |
HGNC: | 3474 |
UniProt: | P62508 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital pole | 2.21e-40 | 1 |
pole of cerebral hemisphere | 2.21e-40 | 1 |
occipital lobe | 1.99e-32 | 5 |
neocortex | 1.10e-17 | 20 |
regional part of cerebral cortex | 3.17e-16 | 22 |
brain | 9.02e-15 | 68 |
future brain | 9.02e-15 | 68 |
pons | 1.22e-14 | 3 |
cerebral cortex | 1.86e-14 | 25 |
pallium | 1.86e-14 | 25 |
central nervous system | 1.45e-12 | 81 |
regional part of nervous system | 2.11e-12 | 53 |
regional part of brain | 2.11e-12 | 53 |
neural tube | 8.70e-12 | 56 |
neural rod | 8.70e-12 | 56 |
future spinal cord | 8.70e-12 | 56 |
neural keel | 8.70e-12 | 56 |
regional part of telencephalon | 1.43e-11 | 32 |
cerebral hemisphere | 1.43e-11 | 32 |
nervous system | 2.13e-11 | 89 |
brain grey matter | 5.87e-11 | 34 |
gray matter | 5.87e-11 | 34 |
telencephalon | 5.87e-11 | 34 |
regional part of forebrain | 2.90e-09 | 41 |
forebrain | 2.90e-09 | 41 |
anterior neural tube | 2.90e-09 | 41 |
future forebrain | 2.90e-09 | 41 |
parietal lobe | 3.49e-09 | 5 |
neural plate | 2.69e-08 | 82 |
presumptive neural plate | 2.69e-08 | 82 |
brainstem | 5.54e-08 | 6 |
neurectoderm | 6.09e-08 | 86 |