FFCP PHASE1:Hg19::chr9:139873437..139873444,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5730 | |EntrezGene=5730 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9592 | |HGNC=9592 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-87bp_to_ENST00000492068_5end | |association_with_transcript=-87bp_to_ENST00000492068_5end | ||
|cluster_id=chr9:139873437..139873444,+ | |||
|coexpression_cluster_id=C485 | |coexpression_cluster_id=C485 | ||
|description=CAGE_peak_14_at_PTGDS_5end | |description=CAGE_peak_14_at_PTGDS_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002575;1.12e-21;2!CL:0000669;2.55e-11;4 | |ontology_enrichment_celltype_v019=CL:0002575;1.12e-21;2!CL:0000669;2.55e-11;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002575,1.12e-21,2;CL:0000669,2.55e-11,4 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.07e-14;3!UBERON:0005425;1.18e-11;1!UBERON:0010226;3.11e-11;1!UBERON:0010115;3.11e-11;1 | |ontology_enrichment_development_v019=UBERON:0003056;1.07e-14;3!UBERON:0005425;1.18e-11;1!UBERON:0010226;3.11e-11;1!UBERON:0010115;3.11e-11;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p14@PTGDS | |short_description=p14@PTGDS | ||
}} | }} |
Latest revision as of 14:35, 16 September 2015
Short description: | p14@PTGDS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_PTGDS_5end |
Coexpression cluster: | C485_Pericytes_retina_cerebral_Dendritic_testis_corpus_spinal |
Association with transcript: | -87bp_to_ENST00000492068_5end |
EntrezGene: | PTGDS |
HGNC: | 9592 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 1.12e-21 | 2 |
pericyte cell | 2.55e-11 | 4 |