FFCP PHASE1:Hg19::chr10:134901348..134901357,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84435 | |EntrezGene=84435 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13838 | |HGNC=13838 | ||
|TSSclassifier=strong | |||
|UniProt=Q86SQ6 | |UniProt=Q86SQ6 | ||
|association_with_transcript=-51bp_to_ENST00000392607,NM_001083909,uc001llx.3_5end | |association_with_transcript=-51bp_to_ENST00000392607,NM_001083909,uc001llx.3_5end | ||
|cluster_id=chr10:134901348..134901357,+ | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_3_at_GPR123_5end | |description=CAGE_peak_3_at_GPR123_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000047!9.09e-08!8 | |ontology_enrichment_celltype=CL:0000047!9.09e-08!8 | ||
|ontology_enrichment_celltype_v019=CL:0000047;1.38e-09;2 | |ontology_enrichment_celltype_v019=CL:0000047;1.38e-09;2 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.48e-71!82;UBERON:0001049!8.76e-69!57;UBERON:0005068!8.76e-69!57;UBERON:0006241!8.76e-69!57;UBERON:0007135!8.76e-69!57;UBERON:0005743!7.24e-68!86;UBERON:0000073!8.37e-64!94;UBERON:0001016!8.37e-64!94;UBERON:0001893!8.67e-59!34;UBERON:0002020!1.13e-58!34;UBERON:0003528!1.13e-58!34;UBERON:0002616!2.66e-58!59;UBERON:0002346!3.14e-58!90;UBERON:0002619!4.97e-58!22;UBERON:0002791!2.13e-55!33;UBERON:0000955!4.61e-55!69;UBERON:0006238!4.61e-55!69;UBERON:0001869!7.34e-53!32;UBERON:0002780!3.16e-52!41;UBERON:0001890!3.16e-52!41;UBERON:0006240!3.16e-52!41;UBERON:0003075!1.35e-51!86;UBERON:0007284!1.35e-51!86;UBERON:0001950!6.58e-51!20;UBERON:0003080!7.36e-51!42;UBERON:0000956!9.35e-51!25;UBERON:0000203!9.35e-51!25;UBERON:0000924!4.60e-40!173;UBERON:0006601!4.60e-40!173;UBERON:0007023!5.66e-37!115;UBERON:0004121!3.03e-35!169;UBERON:0003056!2.87e-33!61;UBERON:0000153!1.35e-29!129;UBERON:0007811!1.35e-29!129;UBERON:0000033!1.79e-29!123;UBERON:0002298!1.69e-21!8;UBERON:0001872!5.37e-20!5;UBERON:0000349!9.58e-20!5;UBERON:0003076!3.30e-18!15;UBERON:0003057!3.30e-18!15;UBERON:0001871!1.48e-17!7;UBERON:0000200!9.43e-17!6;UBERON:0000025!1.30e-14!194;UBERON:0004733!4.06e-14!12;UBERON:0002028!4.06e-14!12;UBERON:0007277!4.06e-14!12;UBERON:0002021!4.65e-13!5;UBERON:0004732!5.87e-13!13;UBERON:0002771!1.29e-12!3;UBERON:0001896!1.12e-11!3;UBERON:0005290!1.12e-11!3;UBERON:0010096!1.12e-11!3;UBERON:0000988!1.26e-11!3;UBERON:0006331!1.57e-11!3;UBERON:0004111!4.61e-11!241;UBERON:0002420!1.73e-10!9;UBERON:0007245!1.73e-10!9;UBERON:0010009!1.73e-10!9;UBERON:0010011!1.73e-10!9;UBERON:0000454!1.73e-10!9;UBERON:0000064!3.77e-10!219;UBERON:0002308!3.94e-10!9;UBERON:0000125!3.94e-10!9;UBERON:0001876!4.63e-09!2;UBERON:0001954!5.86e-09!2;UBERON:0003022!5.86e-09!2;UBERON:0002421!5.86e-09!2;UBERON:0002600!5.86e-09!2;UBERON:0000483!6.40e-09!309;UBERON:0000119!9.41e-09!312;UBERON:0002148!2.24e-08!2;UBERON:0009662!2.24e-08!2;UBERON:0002360!3.92e-08!2;UBERON:0000094!3.92e-08!2;UBERON:0007645!3.92e-08!2;UBERON:0000477!4.44e-08!286;UBERON:0000475!1.65e-07!365 | |ontology_enrichment_uberon=UBERON:0001017!1.48e-71!82;UBERON:0001049!8.76e-69!57;UBERON:0005068!8.76e-69!57;UBERON:0006241!8.76e-69!57;UBERON:0007135!8.76e-69!57;UBERON:0005743!7.24e-68!86;UBERON:0000073!8.37e-64!94;UBERON:0001016!8.37e-64!94;UBERON:0001893!8.67e-59!34;UBERON:0002020!1.13e-58!34;UBERON:0003528!1.13e-58!34;UBERON:0002616!2.66e-58!59;UBERON:0002346!3.14e-58!90;UBERON:0002619!4.97e-58!22;UBERON:0002791!2.13e-55!33;UBERON:0000955!4.61e-55!69;UBERON:0006238!4.61e-55!69;UBERON:0001869!7.34e-53!32;UBERON:0002780!3.16e-52!41;UBERON:0001890!3.16e-52!41;UBERON:0006240!3.16e-52!41;UBERON:0003075!1.35e-51!86;UBERON:0007284!1.35e-51!86;UBERON:0001950!6.58e-51!20;UBERON:0003080!7.36e-51!42;UBERON:0000956!9.35e-51!25;UBERON:0000203!9.35e-51!25;UBERON:0000924!4.60e-40!173;UBERON:0006601!4.60e-40!173;UBERON:0007023!5.66e-37!115;UBERON:0004121!3.03e-35!169;UBERON:0003056!2.87e-33!61;UBERON:0000153!1.35e-29!129;UBERON:0007811!1.35e-29!129;UBERON:0000033!1.79e-29!123;UBERON:0002298!1.69e-21!8;UBERON:0001872!5.37e-20!5;UBERON:0000349!9.58e-20!5;UBERON:0003076!3.30e-18!15;UBERON:0003057!3.30e-18!15;UBERON:0001871!1.48e-17!7;UBERON:0000200!9.43e-17!6;UBERON:0000025!1.30e-14!194;UBERON:0004733!4.06e-14!12;UBERON:0002028!4.06e-14!12;UBERON:0007277!4.06e-14!12;UBERON:0002021!4.65e-13!5;UBERON:0004732!5.87e-13!13;UBERON:0002771!1.29e-12!3;UBERON:0001896!1.12e-11!3;UBERON:0005290!1.12e-11!3;UBERON:0010096!1.12e-11!3;UBERON:0000988!1.26e-11!3;UBERON:0006331!1.57e-11!3;UBERON:0004111!4.61e-11!241;UBERON:0002420!1.73e-10!9;UBERON:0007245!1.73e-10!9;UBERON:0010009!1.73e-10!9;UBERON:0010011!1.73e-10!9;UBERON:0000454!1.73e-10!9;UBERON:0000064!3.77e-10!219;UBERON:0002308!3.94e-10!9;UBERON:0000125!3.94e-10!9;UBERON:0001876!4.63e-09!2;UBERON:0001954!5.86e-09!2;UBERON:0003022!5.86e-09!2;UBERON:0002421!5.86e-09!2;UBERON:0002600!5.86e-09!2;UBERON:0000483!6.40e-09!309;UBERON:0000119!9.41e-09!312;UBERON:0002148!2.24e-08!2;UBERON:0009662!2.24e-08!2;UBERON:0002360!3.92e-08!2;UBERON:0000094!3.92e-08!2;UBERON:0007645!3.92e-08!2;UBERON:0000477!4.44e-08!286;UBERON:0000475!1.65e-07!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.07e-49;20!UBERON:0002619;2.37e-45;22!UBERON:0000956;4.39e-40;25!UBERON:0000203;4.39e-40;25!UBERON:0001893;3.32e-34;34!UBERON:0001869;2.00e-33;32!UBERON:0001872;1.82e-30;5!UBERON:0003528;2.89e-26;34!UBERON:0002020;2.89e-26;34!UBERON:0000200;2.63e-25;6!UBERON:0002791;5.38e-24;32!UBERON:0001871;8.41e-22;6!UBERON:0002780;3.68e-21;41!UBERON:0001890;3.68e-21;41!UBERON:0002581;8.01e-18;1!UBERON:0002902;8.01e-18;1!UBERON:0009899;8.01e-18;1!UBERON:0007190;8.01e-18;1!UBERON:0000955;3.81e-15;68!UBERON:0002021;2.41e-14;5!UBERON:0000073;1.37e-13;53!UBERON:0002616;1.37e-13;53!UBERON:0001017;1.70e-12;75!UBERON:0002771;1.38e-09;2!UBERON:0001876;1.38e-09;2!UBERON:0001016;1.62e-09;83 | |ontology_enrichment_uberon_v019=UBERON:0001950;1.07e-49;20!UBERON:0002619;2.37e-45;22!UBERON:0000956;4.39e-40;25!UBERON:0000203;4.39e-40;25!UBERON:0001893;3.32e-34;34!UBERON:0001869;2.00e-33;32!UBERON:0001872;1.82e-30;5!UBERON:0003528;2.89e-26;34!UBERON:0002020;2.89e-26;34!UBERON:0000200;2.63e-25;6!UBERON:0002791;5.38e-24;32!UBERON:0001871;8.41e-22;6!UBERON:0002780;3.68e-21;41!UBERON:0001890;3.68e-21;41!UBERON:0002581;8.01e-18;1!UBERON:0002902;8.01e-18;1!UBERON:0009899;8.01e-18;1!UBERON:0007190;8.01e-18;1!UBERON:0000955;3.81e-15;68!UBERON:0002021;2.41e-14;5!UBERON:0000073;1.37e-13;53!UBERON:0002616;1.37e-13;53!UBERON:0001017;1.70e-12;75!UBERON:0002771;1.38e-09;2!UBERON:0001876;1.38e-09;2!UBERON:0001016;1.62e-09;83 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,1.01e-49,20;UBERON:0002619,2.25e-45,22;UBERON:0000956,4.18e-40,25;UBERON:0000203,4.18e-40,25;UBERON:0001869,8.87e-40,32;UBERON:0001893,1.76e-37,34;UBERON:0002791,1.58e-31,32;UBERON:0002780,3.74e-31,41;UBERON:0001890,3.74e-31,41;UBERON:0003080,3.74e-31,41;UBERON:0006240,3.74e-31,41;UBERON:0001872,1.28e-30,5;UBERON:0003528,1.05e-29,34;UBERON:0002020,1.05e-29,34;UBERON:0000200,3.24e-25,6;UBERON:0000073,4.10e-24,53;UBERON:0002616,4.10e-24,53;UBERON:0001017,2.99e-23,81;UBERON:0000955,7.43e-23,68;UBERON:0006238,7.43e-23,68;UBERON:0001049,8.16e-23,56;UBERON:0005068,8.16e-23,56;UBERON:0006241,8.16e-23,56;UBERON:0007135,8.16e-23,56;UBERON:0001871,1.08e-21,6;UBERON:0003056,6.29e-21,61;UBERON:0001016,6.66e-21,89;UBERON:0002346,3.09e-18,86;UBERON:0002581,4.44e-18,1;UBERON:0002902,6.23e-18,1;UBERON:0009899,6.23e-18,1;UBERON:0007190,1.22e-17,1;UBERON:0003075,1.79e-15,82;UBERON:0007284,1.79e-15,82;UBERON:0002021,2.25e-14,5;UBERON:0004121,8.03e-13,171;UBERON:0000924,8.03e-13,171;UBERON:0006601,8.03e-13,171;UBERON:0010371,4.35e-12,104;UBERON:0007023,4.30e-11,114;UBERON:0001876,9.46e-10,2;UBERON:0002771,1.86e-09,2;UBERON:0010314,2.19e-09,132;UBERON:0011216,6.24e-08,223 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,1.30139853857622,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,1.9882952955326,0.562677665642051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,0.74214478529481,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0.295547618953547,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.468528891450678,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569797163602908,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.681017030557878,0,0,0,0,0,0.850493793212345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646414781807753,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.610131324509816,0.751145584238999,0.573409195690071,0.110929051536852,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10606748921385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,1.70059936081346,0.371807292777007,0,0,0,0,0,0,0.449604575675217,0,0.798169295285756,2.2562800066483,0.252071696221718,1.9364030689981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14813893851271,2.34323429584154,0.413373593002368,0.443910671357348,1.64092442705466,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0.203909198930495,1.97318320688547,0,0,0,0.471346769748006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,1.08786384305464,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,1.30139853857622,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,1.9882952955326,0.562677665642051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,0.74214478529481,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0.295547618953547,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.468528891450678,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569797163602908,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.681017030557878,0,0,0,0,0,0.850493793212345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646414781807753,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.610131324509816,0.751145584238999,0.573409195690071,0.110929051536852,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10606748921385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,1.70059936081346,0.371807292777007,0,0,0,0,0,0,0.449604575675217,0,0.798169295285756,2.2562800066483,0.252071696221718,1.9364030689981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14813893851271,2.34323429584154,0.413373593002368,0.443910671357348,1.64092442705466,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0.203909198930495,1.97318320688547,0,0,0,0.471346769748006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,1.08786384305464,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@GPR123 | |short_description=p3@GPR123 | ||
}} | }} |
Latest revision as of 04:35, 17 September 2015
Short description: | p3@GPR123 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GPR123_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -51bp_to_ENST00000392607, NM_001083909, uc001llx.3_5end |
EntrezGene: | GPR123 |
HGNC: | 13838 |
UniProt: | Q86SQ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data