FFCP PHASE1:Hg19::chr1:91182854..91182860,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=343472 | |EntrezGene=343472 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=954 | |HGNC=954 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NY43 | |UniProt=Q9NY43 | ||
|association_with_transcript=-60bp_to_ENST00000370445,NM_020063,uc001dns.2_5end | |association_with_transcript=-60bp_to_ENST00000370445,NM_020063,uc001dns.2_5end | ||
|cluster_id=chr1:91182854..91182860,- | |||
|coexpression_cluster_id=C217 | |coexpression_cluster_id=C217 | ||
|description=CAGE_peak_1_at_BARHL2_5end | |description=CAGE_peak_1_at_BARHL2_5end | ||
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|ontology_enrichment_celltype=CL:0000242!3.44e-19!2;CL:0000312!3.16e-08!5;CL:0002319!3.37e-08!25;CL:0000095!9.26e-08!17;CL:0000123!9.26e-08!17;CL:0000240!5.42e-07!6;CL:0000311!5.42e-07!6;CL:0000079!5.42e-07!6;CL:0000237!5.42e-07!6;CL:0000036!5.42e-07!6;CL:0000357!5.42e-07!6;CL:0000114!5.42e-07!6 | |ontology_enrichment_celltype=CL:0000242!3.44e-19!2;CL:0000312!3.16e-08!5;CL:0002319!3.37e-08!25;CL:0000095!9.26e-08!17;CL:0000123!9.26e-08!17;CL:0000240!5.42e-07!6;CL:0000311!5.42e-07!6;CL:0000079!5.42e-07!6;CL:0000237!5.42e-07!6;CL:0000036!5.42e-07!6;CL:0000357!5.42e-07!6;CL:0000114!5.42e-07!6 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.96e-34;3 | |ontology_enrichment_development_v019=UBERON:0006215;5.96e-34;3 | ||
|ontology_enrichment_disease=DOID:171!5.83e-09!10 | |ontology_enrichment_disease=DOID:171!5.83e-09!10 | ||
|ontology_enrichment_disease_v019=DOID:3119;1.86e-08;14 | |ontology_enrichment_disease_v019=DOID:3119;1.86e-08;14 | ||
|ontology_enrichment_disease_v019_2=DOID:3119,1.86e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000966!5.81e-08!5;UBERON:0005388!5.81e-08!5;UBERON:0001802!5.81e-08!5;UBERON:0002037!4.00e-07!6;UBERON:0006215!4.00e-07!6 | |ontology_enrichment_uberon=UBERON:0000966!5.81e-08!5;UBERON:0005388!5.81e-08!5;UBERON:0001802!5.81e-08!5;UBERON:0002037!4.00e-07!6;UBERON:0006215!4.00e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0002037;9.07e-18;6!UBERON:0002680;2.45e-12;9!UBERON:0001895;2.45e-12;9!UBERON:0004733;1.33e-09;12!UBERON:0002028;1.33e-09;12!UBERON:0004732;5.70e-09;13 | |ontology_enrichment_uberon_v019=UBERON:0002037;9.07e-18;6!UBERON:0002680;2.45e-12;9!UBERON:0001895;2.45e-12;9!UBERON:0004733;1.33e-09;12!UBERON:0002028;1.33e-09;12!UBERON:0004732;5.70e-09;13 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,9.07e-18,6;UBERON:0006215,9.07e-18,6;UBERON:0002680,2.45e-12,9;UBERON:0001895,2.45e-12,9;UBERON:0010092,2.45e-12,9;UBERON:0004733,1.33e-09,12;UBERON:0002028,1.33e-09,12;UBERON:0007277,1.33e-09,12;UBERON:0004732,5.70e-09,13;UBERON:0003076,5.93e-08,15;UBERON:0003057,5.93e-08,15 | |||
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|short_description=p1@BARHL2 | |short_description=p1@BARHL2 | ||
}} | }} |
Latest revision as of 18:38, 19 September 2015
Short description: | p1@BARHL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BARHL2_5end |
Coexpression cluster: | C217_carcinoid_neuroectodermal_mature_mesodermal_colon_acute_occipital |
Association with transcript: | -60bp_to_ENST00000370445, NM_020063, uc001dns.2_5end |
EntrezGene: | BARHL2 |
HGNC: | 954 |
UniProt: | Q9NY43 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 9.07e-18 | 6 |
rhombic lip | 9.07e-18 | 6 |
regional part of metencephalon | 2.45e-12 | 9 |
metencephalon | 2.45e-12 | 9 |
future metencephalon | 2.45e-12 | 9 |
segmental subdivision of hindbrain | 1.33e-09 | 12 |
hindbrain | 1.33e-09 | 12 |
presumptive hindbrain | 1.33e-09 | 12 |
segmental subdivision of nervous system | 5.70e-09 | 13 |
posterior neural tube | 5.93e-08 | 15 |
chordal neural plate | 5.93e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 1.86e-08 | 14 |