FFCP PHASE1:Hg19::chr17:38613568..38613587,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:38613568..38613587,+ | |||
|coexpression_cluster_id=C353 | |coexpression_cluster_id=C353 | ||
|description=CAGE_peak_at_chr17:38613568..38613587,+ | |description=CAGE_peak_at_chr17:38613568..38613587,+ | ||
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|ontology_enrichment_celltype=CL:0000055!3.10e-19!180;CL:0000222!1.28e-13!119;CL:0000057!3.14e-13!75;CL:0000680!4.33e-12!57;CL:0000056!4.33e-12!57;CL:0000355!4.33e-12!57;CL:0000183!2.06e-11!59;CL:0000187!1.15e-10!54;CL:0000393!7.30e-10!60;CL:0000211!7.30e-10!60;CL:0000192!7.10e-09!42;CL:0000514!7.10e-09!42;CL:0002334!1.48e-07!12 | |ontology_enrichment_celltype=CL:0000055!3.10e-19!180;CL:0000222!1.28e-13!119;CL:0000057!3.14e-13!75;CL:0000680!4.33e-12!57;CL:0000056!4.33e-12!57;CL:0000355!4.33e-12!57;CL:0000183!2.06e-11!59;CL:0000187!1.15e-10!54;CL:0000393!7.30e-10!60;CL:0000211!7.30e-10!60;CL:0000192!7.10e-09!42;CL:0000514!7.10e-09!42;CL:0002334!1.48e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002334;7.82e-10;12!CL:0000499;1.46e-07;28!CL:0002540;2.91e-07;6!CL:0000135;7.79e-07;3!CL:0000388;7.79e-07;3 | |ontology_enrichment_celltype_v019=CL:0002334;7.82e-10;12!CL:0000499;1.46e-07;28!CL:0002540;2.91e-07;6!CL:0000135;7.79e-07;3!CL:0000388;7.79e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002334,5.87e-10,12;CL:0000057,1.18e-09,76;CL:0000499,1.15e-07,28;CL:0002540,3.60e-07,6;CL:0000048,6.90e-07,427;CL:0000135,8.04e-07,3;CL:0000388,8.04e-07,3;CL:0000153,9.38e-07,9;CL:0000447,9.38e-07,9 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004457;4.61e-12;9!UBERON:0000042;4.61e-12;9!UBERON:0004905;9.26e-11;8!UBERON:0000982;9.26e-11;8!UBERON:0004770;9.26e-11;8!UBERON:0003688;2.26e-10;6!UBERON:0002358;2.26e-10;6!UBERON:0003684;2.26e-10;6!UBERON:0001178;2.26e-10;6!UBERON:0011135;4.55e-09;5!UBERON:0002216;4.55e-09;5!UBERON:0011134;4.55e-09;5!UBERON:0002209;4.55e-09;5!UBERON:0002213;4.55e-09;5!UBERON:0007844;4.55e-09;5!UBERON:0011138;4.55e-09;5!UBERON:0001130;4.55e-09;5!UBERON:0001066;4.55e-09;5!UBERON:0001468;4.55e-09;5!UBERON:0007846;7.79e-07;3!UBERON:0000043;7.79e-07;3!UBERON:0007845;7.79e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0004457;4.61e-12;9!UBERON:0000042;4.61e-12;9!UBERON:0004905;9.26e-11;8!UBERON:0000982;9.26e-11;8!UBERON:0004770;9.26e-11;8!UBERON:0003688;2.26e-10;6!UBERON:0002358;2.26e-10;6!UBERON:0003684;2.26e-10;6!UBERON:0001178;2.26e-10;6!UBERON:0011135;4.55e-09;5!UBERON:0002216;4.55e-09;5!UBERON:0011134;4.55e-09;5!UBERON:0002209;4.55e-09;5!UBERON:0002213;4.55e-09;5!UBERON:0007844;4.55e-09;5!UBERON:0011138;4.55e-09;5!UBERON:0001130;4.55e-09;5!UBERON:0001066;4.55e-09;5!UBERON:0001468;4.55e-09;5!UBERON:0007846;7.79e-07;3!UBERON:0000043;7.79e-07;3!UBERON:0007845;7.79e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004905,5.19e-11,8;UBERON:0000982,5.19e-11,8;UBERON:0004770,5.19e-11,8;UBERON:0003688,3.94e-10,6;UBERON:0002358,3.94e-10,6;UBERON:0003684,3.94e-10,6;UBERON:0001178,3.94e-10,6;UBERON:0011135,2.31e-09,5;UBERON:0002216,2.31e-09,5;UBERON:0011134,2.31e-09,5;UBERON:0002209,2.31e-09,5;UBERON:0002213,2.31e-09,5;UBERON:0005856,2.31e-09,5;UBERON:0005866,2.31e-09,5;UBERON:0005863,2.31e-09,5;UBERON:0007844,2.31e-09,5;UBERON:0011138,2.31e-09,5;UBERON:0001130,2.31e-09,5;UBERON:0001066,2.31e-09,5;UBERON:0001468,2.31e-09,5;UBERON:0004457,2.02e-08,12;UBERON:0000042,2.02e-08,12;UBERON:0007846,8.04e-07,3;UBERON:0000043,8.04e-07,3;UBERON:0007845,8.04e-07,3 | |||
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| ||
|short_description=p@chr17:38613568..38613587,+ | |short_description=p@chr17:38613568..38613587,+ | ||
}} | }} |
Latest revision as of 16:29, 25 July 2015
Short description: | p@chr17:38613568..38613587, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:38613568..38613587, + |
Coexpression cluster: | C353_tenocyte_Nucleus_Chondrocyte_Anulus_Fibroblast_Synoviocyte_tridermal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 5.87e-10 | 12 |
fibroblast | 1.18e-09 | 76 |
stromal cell | 1.15e-07 | 28 |
mesenchymal stem cell of the bone marrow | 3.60e-07 | 6 |
multi fate stem cell | 6.90e-07 | 427 |
fibrocyte | 8.04e-07 | 3 |
tendon cell | 8.04e-07 | 3 |
GAG secreting cell | 9.38e-07 | 9 |
carbohydrate secreting cell | 9.38e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
articulation | 5.19e-11 | 8 |
skeletal joint | 5.19e-11 | 8 |
articular system | 5.19e-11 | 8 |
omentum | 3.94e-10 | 6 |
peritoneum | 3.94e-10 | 6 |
abdominal cavity | 3.94e-10 | 6 |
visceral peritoneum | 3.94e-10 | 6 |
intervertebral cartilage | 2.31e-09 | 5 |
symphysis | 2.31e-09 | 5 |
nonsynovial joint | 2.31e-09 | 5 |
fibrous joint | 2.31e-09 | 5 |
cartilaginous joint | 2.31e-09 | 5 |
developing mesenchymal condensation | 2.31e-09 | 5 |
pre-cartilage condensation | 2.31e-09 | 5 |
cartilaginous condensation | 2.31e-09 | 5 |
cartilage element | 2.31e-09 | 5 |
post-cranial axial skeletal system | 2.31e-09 | 5 |
vertebral column | 2.31e-09 | 5 |
intervertebral disk | 2.31e-09 | 5 |
intervertebral joint | 2.31e-09 | 5 |
cavity lining | 2.02e-08 | 12 |
serous membrane | 2.02e-08 | 12 |
dense regular connective tissue | 8.04e-07 | 3 |
tendon | 8.04e-07 | 3 |
regular connective tissue | 8.04e-07 | 3 |