FFCP PHASE1:Hg19::chr22:38508603..38508611,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8398 | |EntrezGene=8398 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9039 | |HGNC=9039 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=250bp_to_ENST00000463287_5end | |association_with_transcript=250bp_to_ENST00000463287_5end | ||
|cluster_id=chr22:38508603..38508611,- | |||
|coexpression_cluster_id=C25 | |coexpression_cluster_id=C25 | ||
|description=CAGE_peak_18_at_PLA2G6_5end | |description=CAGE_peak_18_at_PLA2G6_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000575!3.44e-19!2;CL:0002159!8.53e-07!13 | |ontology_enrichment_celltype=CL:0000575!3.44e-19!2;CL:0002159!8.53e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002178;1.03e-17;3 | |ontology_enrichment_celltype_v019=CL:0002178;1.03e-17;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002178,9.46e-18,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:3493!7.77e-20!2 | |ontology_enrichment_disease=DOID:3493!7.77e-20!2 | ||
|ontology_enrichment_disease_v019=DOID:3493;4.22e-98;2!DOID:299;5.95e-09;25 | |ontology_enrichment_disease_v019=DOID:3493;4.22e-98;2!DOID:299;5.95e-09;25 | ||
|ontology_enrichment_disease_v019_2=DOID:3493,4.22e-98,2;DOID:299,5.95e-09,25 | |||
|ontology_enrichment_uberon=UBERON:0000160!3.50e-20!27;UBERON:0005409!1.28e-19!35;UBERON:0000997!2.74e-10!1;UBERON:0005056!2.74e-10!1;UBERON:0002108!3.65e-10!14;UBERON:0000964!4.55e-10!4;UBERON:0004348!4.55e-10!4;UBERON:0005427!4.55e-10!4;UBERON:0004921!9.90e-10!129;UBERON:0004185!9.90e-10!129;UBERON:0002370!1.12e-09!4;UBERON:0005058!1.12e-09!4;UBERON:0009113!1.12e-09!4;UBERON:0003295!1.12e-09!4;UBERON:0005562!1.12e-09!4;UBERON:0001007!3.80e-09!155;UBERON:0001555!3.80e-09!155;UBERON:0007026!3.80e-09!155;UBERON:0001042!1.65e-08!10;UBERON:0009145!1.65e-08!10;UBERON:0000059!3.13e-08!11;UBERON:0004119!3.37e-08!169;UBERON:0000925!3.37e-08!169;UBERON:0006595!3.37e-08!169;UBERON:0006562!8.82e-08!11;UBERON:0001557!1.13e-07!19;UBERON:0003351!9.81e-07!6 | |ontology_enrichment_uberon=UBERON:0000160!3.50e-20!27;UBERON:0005409!1.28e-19!35;UBERON:0000997!2.74e-10!1;UBERON:0005056!2.74e-10!1;UBERON:0002108!3.65e-10!14;UBERON:0000964!4.55e-10!4;UBERON:0004348!4.55e-10!4;UBERON:0005427!4.55e-10!4;UBERON:0004921!9.90e-10!129;UBERON:0004185!9.90e-10!129;UBERON:0002370!1.12e-09!4;UBERON:0005058!1.12e-09!4;UBERON:0009113!1.12e-09!4;UBERON:0003295!1.12e-09!4;UBERON:0005562!1.12e-09!4;UBERON:0001007!3.80e-09!155;UBERON:0001555!3.80e-09!155;UBERON:0007026!3.80e-09!155;UBERON:0001042!1.65e-08!10;UBERON:0009145!1.65e-08!10;UBERON:0000059!3.13e-08!11;UBERON:0004119!3.37e-08!169;UBERON:0000925!3.37e-08!169;UBERON:0006595!3.37e-08!169;UBERON:0006562!8.82e-08!11;UBERON:0001557!1.13e-07!19;UBERON:0003351!9.81e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;3.07e-20;22!UBERON:0004921;1.19e-13;33!UBERON:0000160;4.07e-12;17!UBERON:0002108;2.80e-11;4!UBERON:0000945;3.42e-11;5!UBERON:0010039;3.42e-11;5!UBERON:0001155;7.69e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0005409;3.07e-20;22!UBERON:0004921;1.19e-13;33!UBERON:0000160;4.07e-12;17!UBERON:0002108;2.80e-11;4!UBERON:0000945;3.42e-11;5!UBERON:0010039;3.42e-11;5!UBERON:0001155;7.69e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,4.90e-18,25;UBERON:0000160,4.07e-12,17;UBERON:0002108,2.66e-11,4;UBERON:0000945,1.69e-07,8;UBERON:0010039,1.69e-07,8;UBERON:0001155,7.91e-07,9 | |||
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|short_description=p18@PLA2G6 | |short_description=p18@PLA2G6 | ||
}} | }} |
Latest revision as of 07:23, 20 September 2015
Short description: | p18@PLA2G6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_PLA2G6_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 250bp_to_ENST00000463287_5end |
EntrezGene: | PLA2G6 |
HGNC: | 9039 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 9.46e-18 | 3 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 4.90e-18 | 25 |
intestine | 4.07e-12 | 17 |
small intestine | 2.66e-11 | 4 |
stomach | 1.69e-07 | 8 |
food storage organ | 1.69e-07 | 8 |
colon | 7.91e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 4.22e-98 | 2 |
adenocarcinoma | 5.95e-09 | 25 |