FFCP PHASE1:Hg19::chr10:125623682..125623706,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:125623682..125623706,- | |||
|coexpression_cluster_id=C68 | |coexpression_cluster_id=C68 | ||
|description=CAGE_peak_at_chr10:125623682..125623706,- | |description=CAGE_peak_at_chr10:125623682..125623706,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002536!1.35e-13!2;CL:0002537!1.14e-12!5;CL:0000349!8.75e-10!3;CL:0002577!8.75e-10!3 | |ontology_enrichment_celltype=CL:0002536!1.35e-13!2;CL:0002537!1.14e-12!5;CL:0000349!8.75e-10!3;CL:0002577!8.75e-10!3 | ||
|ontology_enrichment_celltype_v019=CL:0000349;6.45e-47;19!CL:0002537;1.89e-45;5!CL:0002577;9.10e-34;3!CL:0002541;1.41e-09;3!CL:0002178;1.67e-09;3 | |ontology_enrichment_celltype_v019=CL:0000349;6.45e-47;19!CL:0002537;1.89e-45;5!CL:0002577;9.10e-34;3!CL:0002541;1.41e-09;3!CL:0002178;1.67e-09;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,6.45e-47,19;CL:0002537,1.89e-45,5;CL:0002577,1.08e-33,3;CL:0002541,1.30e-09,3;CL:0002178,1.67e-09,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:5093!1.92e-07!4;DOID:1612!1.92e-07!4 | |ontology_enrichment_disease=DOID:5093!1.92e-07!4;DOID:1612!1.92e-07!4 | ||
|ontology_enrichment_disease_v019=DOID:3493;1.37e-13;2!DOID:5093;2.04e-07;4!DOID:1612;2.04e-07;4 | |ontology_enrichment_disease_v019=DOID:3493;1.37e-13;2!DOID:5093;2.04e-07;4!DOID:1612;2.04e-07;4 | ||
|ontology_enrichment_disease_v019_2=DOID:3493,1.37e-13,2;DOID:5093,2.04e-07,4;DOID:1612,2.04e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0005631!3.52e-36!14;UBERON:0000158!3.52e-36!14;UBERON:0000305!3.20e-23!7;UBERON:0000478!1.69e-20!24;UBERON:0004871!2.67e-20!8;UBERON:0001987!3.99e-15!4;UBERON:0004340!3.99e-15!4;UBERON:0003124!4.42e-15!7;UBERON:0005795!8.20e-10!22;UBERON:0004923!1.43e-09!57;UBERON:0004175!1.48e-08!25;UBERON:0001301!9.44e-08!1;UBERON:0002372!2.04e-07!1;UBERON:0001961!2.04e-07!1;UBERON:0001744!2.04e-07!1;UBERON:0001735!2.04e-07!1;UBERON:0000995!2.70e-07!21;UBERON:0003133!2.96e-07!48;UBERON:0007190!2.98e-07!1;UBERON:0003975!5.94e-07!22 | |ontology_enrichment_uberon=UBERON:0005631!3.52e-36!14;UBERON:0000158!3.52e-36!14;UBERON:0000305!3.20e-23!7;UBERON:0000478!1.69e-20!24;UBERON:0004871!2.67e-20!8;UBERON:0001987!3.99e-15!4;UBERON:0004340!3.99e-15!4;UBERON:0003124!4.42e-15!7;UBERON:0005795!8.20e-10!22;UBERON:0004923!1.43e-09!57;UBERON:0004175!1.48e-08!25;UBERON:0001301!9.44e-08!1;UBERON:0002372!2.04e-07!1;UBERON:0001961!2.04e-07!1;UBERON:0001744!2.04e-07!1;UBERON:0001735!2.04e-07!1;UBERON:0000995!2.70e-07!21;UBERON:0003133!2.96e-07!48;UBERON:0007190!2.98e-07!1;UBERON:0003975!5.94e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;3.89e-40;10!UBERON:0000158;3.89e-40;10!UBERON:0000478;3.17e-37;24!UBERON:0000305;9.77e-33;7!UBERON:0001987;1.26e-25;4!UBERON:0003124;1.41e-09;3!UBERON:0000920;1.41e-09;3 | |ontology_enrichment_uberon_v019=UBERON:0005631;3.89e-40;10!UBERON:0000158;3.89e-40;10!UBERON:0000478;3.17e-37;24!UBERON:0000305;9.77e-33;7!UBERON:0001987;1.26e-25;4!UBERON:0003124;1.41e-09;3!UBERON:0000920;1.41e-09;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.65e-63,14;UBERON:0000158,1.65e-63,14;UBERON:0000478,3.17e-37,24;UBERON:0000305,9.77e-33,7;UBERON:0003124,2.57e-32,7;UBERON:0004871,9.31e-29,8;UBERON:0001987,1.43e-25,4;UBERON:0004340,1.43e-25,4;UBERON:0004923,1.10e-13,66;UBERON:0000920,1.30e-09,3 | |||
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|short_description=p@chr10:125623682..125623706,- | |short_description=p@chr10:125623682..125623706,- | ||
}} | }} |
Latest revision as of 11:17, 23 July 2015
Short description: | p@chr10:125623682..125623706, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:125623682..125623706, - |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 6.45e-47 | 19 |
amnion mesenchymal stem cell | 1.89e-45 | 5 |
placental epithelial cell | 1.08e-33 | 3 |
chorionic membrane mesenchymal stem cell | 1.30e-09 | 3 |
epithelial cell of stomach | 1.67e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.65e-63 | 14 |
membranous layer | 1.65e-63 | 14 |
extraembryonic structure | 3.17e-37 | 24 |
amnion | 9.77e-33 | 7 |
chorion | 2.57e-32 | 7 |
somatic layer of lateral plate mesoderm | 9.31e-29 | 8 |
placenta | 1.43e-25 | 4 |
allantois | 1.43e-25 | 4 |
organ component layer | 1.10e-13 | 66 |
egg chorion | 1.30e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.37e-13 | 2 |
thoracic cancer | 2.04e-07 | 4 |
breast cancer | 2.04e-07 | 4 |