FFCP PHASE1:Hg19::chr1:27287010..27287023,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:27287010..27287023,+
|short_description=p@chr1:27287010..27287023,+
|description=CAGE_peak_at_chr1:27287010..27287023,+
|association_with_transcript=NA
|E...") |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:27287010..27287023,+ | |||
|description=CAGE_peak_at_chr1:27287010..27287023,+ | |||
|id=chr1:27287010..27287023,+ | |||
|ontology_enrichment_celltype=CL:0002076!1.03e-20!43;CL:0000066!1.80e-15!254;CL:0000223!1.46e-14!59;CL:0002368!6.13e-13!13;CL:0002251!1.30e-09!21;CL:0002202!1.35e-07!9;CL:0002632!1.35e-07!9;CL:0000244!1.83e-07!4;CL:0000731!1.83e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000244;5.10e-25;4!CL:0000731;5.10e-25;4!CL:0002368;2.40e-16;13!CL:0000575;1.60e-13;2!CL:0002076;2.21e-11;42!CL:0002336;2.49e-07;1!CL:0002261;2.49e-07;1!CL:0002252;2.49e-07;1!CL:0002170;2.49e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,2.16e-25,4;CL:0000731,2.16e-25,4;CL:0002368,2.35e-16,13;CL:0000575,2.64e-13,2;CL:0002076,9.86e-13,42;CL:0000223,9.62e-09,58;CL:0000066,4.21e-08,253;CL:0002336,1.42e-07,1;CL:0002261,1.42e-07,1;CL:0002170,1.42e-07,1;CL:0002252,2.66e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0007297;5.50e-13;2!UBERON:0005754;2.49e-07;1 | |||
|ontology_enrichment_disease=DOID:1749!9.11e-11!14;DOID:305!6.95e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:0050619;2.49e-07;1!DOID:1357;2.49e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,3.01e-07,1;DOID:1357,3.01e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!6.19e-24!169;UBERON:0000925!6.19e-24!169;UBERON:0006595!6.19e-24!169;UBERON:0001004!5.71e-19!72;UBERON:0001007!3.05e-17!155;UBERON:0001555!3.05e-17!155;UBERON:0007026!3.05e-17!155;UBERON:0000065!3.67e-13!53;UBERON:0005153!7.17e-13!37;UBERON:0000077!6.65e-12!130;UBERON:0000464!8.02e-12!104;UBERON:0004921!9.81e-12!129;UBERON:0004185!9.81e-12!129;UBERON:0005178!1.27e-11!34;UBERON:0002224!1.27e-11!34;UBERON:0005911!1.44e-11!82;UBERON:0005181!4.03e-11!35;UBERON:0000161!1.50e-10!35;UBERON:0000165!7.83e-10!28;UBERON:0000930!7.83e-10!28;UBERON:0005157!9.55e-10!51;UBERON:0000166!9.81e-10!21;UBERON:0000466!2.13e-09!126;UBERON:0007196!4.84e-09!14;UBERON:0001558!4.84e-09!14;UBERON:0001041!2.33e-08!98;UBERON:0000915!3.84e-08!52;UBERON:0002048!4.97e-08!22;UBERON:0000117!4.97e-08!22;UBERON:0000171!4.97e-08!22;UBERON:0000170!4.97e-08!22;UBERON:0005597!4.97e-08!22;UBERON:0000118!4.97e-08!22;UBERON:0004807!7.58e-08!28;UBERON:0000072!1.02e-07!46;UBERON:0008947!1.16e-07!38;UBERON:0003258!1.16e-07!38;UBERON:0006554!2.39e-07!44;UBERON:0005177!2.70e-07!107;UBERON:0000062!3.99e-07!511;UBERON:0001008!4.53e-07!45;UBERON:0000468!6.01e-07!659;UBERON:0009569!6.03e-07!113;UBERON:0000922!6.88e-07!612;UBERON:0003729!8.45e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;4.60e-20;5!UBERON:0006947;1.35e-18;3!UBERON:0004054;1.35e-18;3!UBERON:0005910;9.39e-17;6!UBERON:0005904;4.30e-14;4!UBERON:0000486;7.78e-13;12!UBERON:0001000;2.49e-07;1!UBERON:0000998;2.49e-07;1!UBERON:0001301;2.49e-07;1!UBERON:0001764;2.49e-07;1!UBERON:0006868;2.49e-07;1!UBERON:0001825;2.49e-07;1!UBERON:0005352;2.49e-07;1!UBERON:0000964;3.51e-07;4!UBERON:0010409;3.51e-07;4!UBERON:0005911;4.09e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,2.33e-20,5;UBERON:0006947,1.44e-18,3;UBERON:0004054,1.44e-18,3;UBERON:0005910,5.34e-17,6;UBERON:0005904,4.52e-14,4;UBERON:0004119,9.78e-10,160;UBERON:0000925,9.78e-10,160;UBERON:0006595,9.78e-10,160;UBERON:0001004,6.14e-08,74;UBERON:0001301,1.61e-07,1;UBERON:0000998,2.83e-07,1;UBERON:0006868,2.83e-07,1;UBERON:0001764,3.01e-07,1;UBERON:0001825,3.01e-07,1;UBERON:0001000,3.62e-07,1;UBERON:0005352,3.62e-07,1;UBERON:0000964,4.49e-07,4;UBERON:0010409,4.49e-07,4;UBERON:0004348,4.49e-07,4;UBERON:0005427,4.49e-07,4 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.737201809504527,0.697801167972428,0.655324116390517,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.90361775633475,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,3.27865759463288,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0.818238361772504,2.00763216772303,0.121973706129595,0.132529768321485,0.116193942869518,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0.658501712451753,0,0.502644862058154,1.85176890317059,0,0,0,0,0,0,0,0,2.37061319387782,0,0,0,0,1.87467667973554,0.503946384596579,0.850650583454319,0.53735113621709,0.871901815541886,1.91691339582606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.846016147141356,1.40354529212299,0.552485933615378,0,0,0,0,0.231046011313244,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4875642382488,1.53752053892085,8.0396008871588,1.6185244936888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,1.05844323998063,0.670302275535787,0,0.0941438007767792,2.15252686335615,1.68471475667626,2.21715076768338,1.83778720165568,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0.47748896947538,0.890894042497916,0,0,0,0,0,0.63337622438398,0.19924798825107,0.276283915531148,1.0077309914171,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0.260427761085233,0.174919999992391,0,0.341380344856499,0.254253650292766,0.236387681767936,0,0,0,0,0,0,0.110579259931225,0,0,0,0.278847488557207,0.0769502585037971,0,0.46112780877612,0.0897576444097721,0.54323685961004,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,0,0,0,0,0,0,0,0,0,0,1.18375320854817,1.20990716048664,0,0,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0.195984794828755,0.174118413160805,1.7472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0.195551382734803,0.0801588202515337,0.426905989478705,0,0.288180834308212,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0.412618309791701,0.83088067605837,0.2249738915515,0,0,0.670869375198532,0.0788057072991982,0.472091293214983,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,2.11444506695002,0.320362237703084,0.471612915298998,0.414239055347196,0,0,0,0,0,0,0,0,1.25643277000187,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633936370075881,0,0,0,0,0,0.699397538597222,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0.588886311006154,0.471878893390961,0.183428598521679,0.231051332300676,0,0,0,0.0752103283492573,0,2.34454203369928,0.261906694481422,0,0.147856086217045,0,0,0,0,0,0.548257766857182,0,0,0.255524855279191,0,0,0.606965604236632,2.73194629621557,0,0,0,0,0,0,0.222462803784138,0.863424021355654,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,2.15113679410139,0,0,1.27016115057279,0.4582137370881,0,0,0,0.392600934460972,0,0,0,0,0.485710993059139,0.233939463462106,0.397901550322736,0,0,0,0.603851374266694,0.617393264863557,1.09279780251979,0.470317296361523,0,0,0,0,0,0,0,0,0,0.535661815816973,0,1.12337913364836,0,0.917458566809082,0,0,0,0,1.5870805215462,0,0,0,0,0,0,0.305966489225945,0.26721740526556,0,0,0.227336094654718,0,0,0,0.213233981900981,0.476128862927481,0.129177819672012,0.186224142887574,0,0.572824424503484,0.808468755832877,0.217716747896961,0.342233301085281,0.5388164241167,0.78894425931944,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.737201809504527,0.697801167972428,0.655324116390517,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.90361775633475,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,3.27865759463288,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0.818238361772504,2.00763216772303,0.121973706129595,0.132529768321485,0.116193942869518,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0.658501712451753,0,0.502644862058154,1.85176890317059,0,0,0,0,0,0,0,0,2.37061319387782,0,0,0,0,1.87467667973554,0.503946384596579,0.850650583454319,0.53735113621709,0.871901815541886,1.91691339582606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.846016147141356,1.40354529212299,0.552485933615378,0,0,0,0,0.231046011313244,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4875642382488,1.53752053892085,8.0396008871588,1.6185244936888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,1.05844323998063,0.670302275535787,0,0.0941438007767792,2.15252686335615,1.68471475667626,2.21715076768338,1.83778720165568,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0.47748896947538,0.890894042497916,0,0,0,0,0,0.63337622438398,0.19924798825107,0.276283915531148,1.0077309914171,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0.260427761085233,0.174919999992391,0,0.341380344856499,0.254253650292766,0.236387681767936,0,0,0,0,0,0,0.110579259931225,0,0,0,0.278847488557207,0.0769502585037971,0,0.46112780877612,0.0897576444097721,0.54323685961004,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,0,0,0,0,0,0,0,0,0,0,1.18375320854817,1.20990716048664,0,0,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0.195984794828755,0.174118413160805,1.7472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0.195551382734803,0.0801588202515337,0.426905989478705,0,0.288180834308212,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0.412618309791701,0.83088067605837,0.2249738915515,0,0,0.670869375198532,0.0788057072991982,0.472091293214983,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,2.11444506695002,0.320362237703084,0.471612915298998,0.414239055347196,0,0,0,0,0,0,0,0,1.25643277000187,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633936370075881,0,0,0,0,0,0.699397538597222,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0.588886311006154,0.471878893390961,0.183428598521679,0.231051332300676,0,0,0,0.0752103283492573,0,2.34454203369928,0.261906694481422,0,0.147856086217045,0,0,0,0,0,0.548257766857182,0,0,0.255524855279191,0,0,0.606965604236632,2.73194629621557,0,0,0,0,0,0,0.222462803784138,0.863424021355654,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,2.15113679410139,0,0,1.27016115057279,0.4582137370881,0,0,0,0.392600934460972,0,0,0,0,0.485710993059139,0.233939463462106,0.397901550322736,0,0,0,0.603851374266694,0.617393264863557,1.09279780251979,0.470317296361523,0,0,0,0,0,0,0,0,0,0.535661815816973,0,1.12337913364836,0,0.917458566809082,0,0,0,0,1.5870805215462,0,0,0,0,0,0,0.305966489225945,0.26721740526556,0,0,0.227336094654718,0,0,0,0.213233981900981,0.476128862927481,0.129177819672012,0.186224142887574,0,0.572824424503484,0.808468755832877,0.217716747896961,0.342233301085281,0.5388164241167,0.78894425931944,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0 | ||
|short_description=p@chr1:27287010..27287023,+ | |||
}} | }} |
Latest revision as of 06:43, 28 July 2015
Short description: | p@chr1:27287010..27287023, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:27287010..27287023, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 2.16e-25 | 4 |
urothelial cell | 2.16e-25 | 4 |
respiratory epithelial cell | 2.35e-16 | 13 |
corneal epithelial cell | 2.64e-13 | 2 |
endo-epithelial cell | 9.86e-13 | 42 |
endodermal cell | 9.62e-09 | 58 |
epithelial cell | 4.21e-08 | 253 |
buccal mucosa cell | 1.42e-07 | 1 |
endothelial cell of viscerocranial mucosa | 1.42e-07 | 1 |
keratinized cell of the oral mucosa | 1.42e-07 | 1 |
epithelial cell of esophagus | 2.66e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
urothelium | 2.33e-20 | 5 |
male genital duct | 1.44e-18 | 3 |
internal male genitalia | 1.44e-18 | 3 |
transitional epithelium | 5.34e-17 | 6 |
duct of male reproductive system | 4.52e-14 | 4 |
endoderm-derived structure | 9.78e-10 | 160 |
endoderm | 9.78e-10 | 160 |
presumptive endoderm | 9.78e-10 | 160 |
respiratory system | 6.14e-08 | 74 |
epididymis | 1.61e-07 | 1 |
seminal vesicle | 2.83e-07 | 1 |
seminal fluid secreting gland | 2.83e-07 | 1 |
maxillary sinus | 3.01e-07 | 1 |
paranasal sinus | 3.01e-07 | 1 |
vas deferens | 3.62e-07 | 1 |
spermatic cord | 3.62e-07 | 1 |
cornea | 4.49e-07 | 4 |
eye surface | 4.49e-07 | 4 |
optic eminence | 4.49e-07 | 4 |
corneal primordium | 4.49e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 3.01e-07 | 1 |
maxillary sinus cancer | 3.01e-07 | 1 |