FFCP PHASE1:Hg19::chr5:6633397..6633445,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54888 | |EntrezGene=54888 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25994 | |HGNC=25994 | ||
|TSSclassifier=strong | |||
|UniProt=Q08J23,D6RAS3,G3V1R4 | |UniProt=Q08J23,D6RAS3,G3V1R4 | ||
|association_with_transcript=0bp_to_ENST00000264670,ENST00000504374,ENST00000539938_5end | |association_with_transcript=0bp_to_ENST00000264670,ENST00000504374,ENST00000539938_5end | ||
|cluster_id=chr5:6633397..6633445,- | |||
|description=CAGE_peak_2_at_NSUN2_5end | |description=CAGE_peak_2_at_NSUN2_5end | ||
|id=chr5:6633397..6633445,- | |id=chr5:6633397..6633445,- | ||
|ontology_enrichment_celltype=CL:0000066!9.10e-17!254;CL:0000223!1.10e-08!59 | |ontology_enrichment_celltype=CL:0000066!9.10e-17!254;CL:0000223!1.10e-08!59 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.31e-17,253;CL:0000223,3.86e-09,58 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.73e-07;29 | |ontology_enrichment_development_v019=UBERON:0008947;1.73e-07;29 | ||
|ontology_enrichment_disease=DOID:162!3.56e-31!235;DOID:14566!1.52e-29!239;DOID:0050687!1.60e-24!143;DOID:305!1.01e-23!106;DOID:0050686!5.57e-12!137 | |ontology_enrichment_disease=DOID:162!3.56e-31!235;DOID:14566!1.52e-29!239;DOID:0050687!1.60e-24!143;DOID:305!1.01e-23!106;DOID:0050686!5.57e-12!137 | ||
|ontology_enrichment_disease_v019=DOID:305;4.05e-07;106!DOID:0050687;8.30e-07;143 | |ontology_enrichment_disease_v019=DOID:305;4.05e-07;106!DOID:0050687;8.30e-07;143 | ||
|ontology_enrichment_disease_v019_2=DOID:162,9.57e-32,235;DOID:14566,4.28e-30,239;DOID:0050687,7.03e-25,143;DOID:305,2.87e-24,106;DOID:0050686,3.14e-12,137 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.00e-07!9;UBERON:0008947!8.26e-07!38;UBERON:0003258!8.26e-07!38 | |ontology_enrichment_uberon=UBERON:0001737!2.00e-07!9;UBERON:0008947!8.26e-07!38;UBERON:0003258!8.26e-07!38 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;9.10e-08;9!UBERON:0001557;9.10e-08;9 | |ontology_enrichment_uberon_v019=UBERON:0001737;9.10e-08;9!UBERON:0001557;9.10e-08;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.53e-07,9;UBERON:0008947,8.03e-07,38;UBERON:0003258,8.03e-07,38 | |||
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| ||
|short_description=p2@NSUN2 | |short_description=p2@NSUN2 | ||
}} | }} |
Latest revision as of 11:30, 18 September 2015
Short description: | p2@NSUN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NSUN2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000264670, ENST00000504374, ENST00000539938_5end |
EntrezGene: | NSUN2 |
HGNC: | 25994 |
UniProt: | Q08J23D6RAS3G3V1R4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.31e-17 | 253 |
endodermal cell | 3.86e-09 | 58 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.53e-07 | 9 |
respiratory primordium | 8.03e-07 | 38 |
endoderm of foregut | 8.03e-07 | 38 |
Ontology term | p-value | n |
---|---|---|
cancer | 9.57e-32 | 235 |
disease of cellular proliferation | 4.28e-30 | 239 |
cell type cancer | 7.03e-25 | 143 |
carcinoma | 2.87e-24 | 106 |
organ system cancer | 3.14e-12 | 137 |