FFCP PHASE1:Hg19::chr9:128307438..128307440,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:128307438..128307440,+ | |||
|coexpression_cluster_id=C4669 | |coexpression_cluster_id=C4669 | ||
|description=CAGE_peak_at_chr9:128307438..128307440,+ | |description=CAGE_peak_at_chr9:128307438..128307440,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002076!6.53e-08!43 | |ontology_enrichment_celltype=CL:0002076!6.53e-08!43 | ||
|ontology_enrichment_celltype_v019=CL:0002178;6.73e-11;3!CL:0002577;9.90e-11;3 | |ontology_enrichment_celltype_v019=CL:0002178;6.73e-11;3!CL:0002577;9.90e-11;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002178,6.73e-11,3;CL:0002577,8.99e-11,3 | |||
|ontology_enrichment_development_v019=UBERON:0006242;2.37e-29;1!UBERON:0009497;1.13e-09;13 | |ontology_enrichment_development_v019=UBERON:0006242;2.37e-29;1!UBERON:0009497;1.13e-09;13 | ||
|ontology_enrichment_disease=DOID:299!1.74e-12!25;DOID:305!4.34e-10!106;DOID:3493!3.83e-09!2 | |ontology_enrichment_disease=DOID:299!1.74e-12!25;DOID:305!4.34e-10!106;DOID:3493!3.83e-09!2 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.96e-15!169;UBERON:0000925!1.96e-15!169;UBERON:0006595!1.96e-15!169;UBERON:0001007!1.18e-14!155;UBERON:0001555!1.18e-14!155;UBERON:0007026!1.18e-14!155;UBERON:0005409!1.55e-14!35;UBERON:0004921!2.08e-14!129;UBERON:0004185!2.08e-14!129;UBERON:0000344!7.56e-12!12;UBERON:0000160!1.06e-10!27;UBERON:0002394!4.93e-10!4;UBERON:0003928!4.93e-10!4;UBERON:0002294!5.20e-10!7;UBERON:0001173!5.20e-10!7;UBERON:0004912!5.20e-10!7;UBERON:0003127!1.39e-09!2;UBERON:0000077!1.55e-09!130;UBERON:0001041!1.88e-07!98;UBERON:0005911!3.97e-07!82;UBERON:0002108!7.96e-07!14 | |ontology_enrichment_uberon=UBERON:0004119!1.96e-15!169;UBERON:0000925!1.96e-15!169;UBERON:0006595!1.96e-15!169;UBERON:0001007!1.18e-14!155;UBERON:0001555!1.18e-14!155;UBERON:0007026!1.18e-14!155;UBERON:0005409!1.55e-14!35;UBERON:0004921!2.08e-14!129;UBERON:0004185!2.08e-14!129;UBERON:0000344!7.56e-12!12;UBERON:0000160!1.06e-10!27;UBERON:0002394!4.93e-10!4;UBERON:0003928!4.93e-10!4;UBERON:0002294!5.20e-10!7;UBERON:0001173!5.20e-10!7;UBERON:0004912!5.20e-10!7;UBERON:0003127!1.39e-09!2;UBERON:0000077!1.55e-09!130;UBERON:0001041!1.88e-07!98;UBERON:0005911!3.97e-07!82;UBERON:0002108!7.96e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0002294;4.36e-17;7!UBERON:0001173;4.36e-17;7!UBERON:0002110;9.90e-11;3!UBERON:0002114;9.90e-11;2!UBERON:0001987;2.26e-08;4!UBERON:0002394;2.26e-08;4!UBERON:0003928;2.26e-08;4!UBERON:0000945;4.79e-07;5!UBERON:0010039;4.79e-07;5!UBERON:0002108;6.04e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0002294;4.36e-17;7!UBERON:0001173;4.36e-17;7!UBERON:0002110;9.90e-11;3!UBERON:0002114;9.90e-11;2!UBERON:0001987;2.26e-08;4!UBERON:0002394;2.26e-08;4!UBERON:0003928;2.26e-08;4!UBERON:0000945;4.79e-07;5!UBERON:0010039;4.79e-07;5!UBERON:0002108;6.04e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002294,1.69e-13,9;UBERON:0001173,1.69e-13,9;UBERON:0004912,1.69e-13,9;UBERON:0002110,1.09e-10,3;UBERON:0006242,1.09e-10,3;UBERON:0002114,1.20e-10,2;UBERON:0001987,2.11e-08,4;UBERON:0004340,2.11e-08,4;UBERON:0002108,6.77e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.873765488520689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99424864653152,0,0,0,0,0.71623345421307,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,1.25314822272926,0,0,0,0,0,0,0,0,0.437299999980979,0,0.227586896570999,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.565412285735763,0,0,0.176915129006678,0.611030144933625,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0.520679215005393,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,1.06726497369676,0,4.17862209746907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0.492137407573744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71086837884329,0,0.213574825135389,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0.0752103283492573,0,0.781514011233092,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.667388411352415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0.243835849964539,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0.730336388246517,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0.143444410785353,0.99798106963804,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.873765488520689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99424864653152,0,0,0,0,0.71623345421307,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,1.25314822272926,0,0,0,0,0,0,0,0,0.437299999980979,0,0.227586896570999,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.565412285735763,0,0,0.176915129006678,0.611030144933625,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0.520679215005393,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,1.06726497369676,0,4.17862209746907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0.492137407573744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71086837884329,0,0.213574825135389,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0.0752103283492573,0,0.781514011233092,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.667388411352415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0.243835849964539,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0.730336388246517,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0.143444410785353,0.99798106963804,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr9:128307438..128307440,+ | |short_description=p@chr9:128307438..128307440,+ | ||
}} | }} |
Latest revision as of 22:43, 31 July 2015
Short description: | p@chr9:128307438..128307440, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:128307438..128307440, + |
Coexpression cluster: | C4669_adenocarcinoma_gastric_lung_stomach_endometrioid_trachea_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 6.73e-11 | 3 |
placental epithelial cell | 8.99e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
biliary system | 1.69e-13 | 9 |
biliary tree | 1.69e-13 | 9 |
biliary bud | 1.69e-13 | 9 |
gallbladder | 1.09e-10 | 3 |
gall bladder primordium | 1.09e-10 | 3 |
duodenum | 1.20e-10 | 2 |
placenta | 2.11e-08 | 4 |
allantois | 2.11e-08 | 4 |
small intestine | 6.77e-07 | 4 |