FFCP PHASE1:Hg19::chr11:2159479..2159489,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3481 | |EntrezGene=3481 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=5466 | |HGNC=5466 | ||
|TSSclassifier=strong | |||
|UniProt=P01344 | |UniProt=P01344 | ||
|association_with_transcript=-6bp_to_X06159_5end | |association_with_transcript=-6bp_to_X06159_5end | ||
|cluster_id=chr11:2159479..2159489,- | |||
|coexpression_cluster_id=C172 | |coexpression_cluster_id=C172 | ||
|description=CAGE_peak_54_at_IGF2_5end | |description=CAGE_peak_54_at_IGF2_5end | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000349;2.25e-27;19!CL:0002537;8.94e-15;5!CL:0002575;1.40e-10;2!CL:0002536;3.12e-10;2!CL:0000244;3.20e-10;4!CL:0000731;3.20e-10;4!CL:0002549;1.56e-09;2!CL:0002541;2.22e-07;3!CL:0002577;2.97e-07;3 | |ontology_enrichment_celltype_v019=CL:0000349;2.25e-27;19!CL:0002537;8.94e-15;5!CL:0002575;1.40e-10;2!CL:0002536;3.12e-10;2!CL:0000244;3.20e-10;4!CL:0000731;3.20e-10;4!CL:0002549;1.56e-09;2!CL:0002541;2.22e-07;3!CL:0002577;2.97e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.20e-27,19;CL:0002537,8.65e-15,5;CL:0002575,1.33e-10,2;CL:0000244,3.00e-10,4;CL:0000731,3.00e-10,4;CL:0002536,3.06e-10,2;CL:0002549,2.07e-09,2;CL:0002541,2.22e-07,3;CL:0002577,2.92e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;9.80e-07;11 | |ontology_enrichment_development_v019=UBERON:0004161;9.80e-07;11 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!3.30e-16!14;UBERON:0000158!3.30e-16!14;UBERON:0003124!4.76e-10!7;UBERON:0000478!3.58e-09!24;UBERON:0004923!1.81e-08!57;UBERON:0000305!7.21e-08!7;UBERON:0004119!3.52e-07!169;UBERON:0000925!3.52e-07!169;UBERON:0006595!3.52e-07!169;UBERON:0000365!6.73e-07!5 | |ontology_enrichment_uberon=UBERON:0005631!3.30e-16!14;UBERON:0000158!3.30e-16!14;UBERON:0003124!4.76e-10!7;UBERON:0000478!3.58e-09!24;UBERON:0004923!1.81e-08!57;UBERON:0000305!7.21e-08!7;UBERON:0004119!3.52e-07!169;UBERON:0000925!3.52e-07!169;UBERON:0006595!3.52e-07!169;UBERON:0000365!6.73e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.06e-28;10!UBERON:0000158;2.06e-28;10!UBERON:0000478;3.46e-25;24!UBERON:0000305;5.51e-23;7!UBERON:0001987;5.33e-11;4!UBERON:0005629;1.56e-09;2!UBERON:0005358;1.56e-09;2!UBERON:0001886;1.56e-09;2!UBERON:0004086;1.56e-09;2!UBERON:0005282;1.56e-09;2!UBERON:0005281;1.56e-09;2!UBERON:0000365;2.88e-08;5!UBERON:0003124;2.22e-07;3!UBERON:0000920;2.22e-07;3!UBERON:0005910;5.85e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0005631;2.06e-28;10!UBERON:0000158;2.06e-28;10!UBERON:0000478;3.46e-25;24!UBERON:0000305;5.51e-23;7!UBERON:0001987;5.33e-11;4!UBERON:0005629;1.56e-09;2!UBERON:0005358;1.56e-09;2!UBERON:0001886;1.56e-09;2!UBERON:0004086;1.56e-09;2!UBERON:0005282;1.56e-09;2!UBERON:0005281;1.56e-09;2!UBERON:0000365;2.88e-08;5!UBERON:0003124;2.22e-07;3!UBERON:0000920;2.22e-07;3!UBERON:0005910;5.85e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.04e-37,14;UBERON:0000158,1.04e-37,14;UBERON:0000478,3.63e-25,24;UBERON:0000305,5.21e-23,7;UBERON:0004871,4.66e-20,8;UBERON:0003124,1.26e-16,7;UBERON:0001987,5.80e-11,4;UBERON:0004340,5.80e-11,4;UBERON:0005629,2.07e-09,2;UBERON:0005358,2.07e-09,2;UBERON:0001886,2.07e-09,2;UBERON:0004086,2.07e-09,2;UBERON:0005282,2.07e-09,2;UBERON:0005281,2.07e-09,2;UBERON:0004923,7.35e-09,66;UBERON:0000365,2.74e-08,5;UBERON:0006554,2.18e-07,47;UBERON:0000920,2.22e-07,3;UBERON:0001008,3.38e-07,48;UBERON:0005910,5.61e-07,6 | |||
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| ||
|short_description=p54@IGF2 | |short_description=p54@IGF2 | ||
}} | }} |
Latest revision as of 08:10, 17 September 2015
Short description: | p54@IGF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_54_at_IGF2_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | -6bp_to_X06159_5end |
EntrezGene: | IGF2 |
HGNC: | 5466 |
UniProt: | P01344 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.20e-27 | 19 |
amnion mesenchymal stem cell | 8.65e-15 | 5 |
central nervous system pericyte | 1.33e-10 | 2 |
transitional epithelial cell | 3.00e-10 | 4 |
urothelial cell | 3.00e-10 | 4 |
amniotic epithelial cell | 3.06e-10 | 2 |
fibroblast of choroid plexus | 2.07e-09 | 2 |
chorionic membrane mesenchymal stem cell | 2.22e-07 | 3 |
placental epithelial cell | 2.92e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.04e-37 | 14 |
membranous layer | 1.04e-37 | 14 |
extraembryonic structure | 3.63e-25 | 24 |
amnion | 5.21e-23 | 7 |
somatic layer of lateral plate mesoderm | 4.66e-20 | 8 |
chorion | 1.26e-16 | 7 |
placenta | 5.80e-11 | 4 |
allantois | 5.80e-11 | 4 |
vascular plexus | 2.07e-09 | 2 |
ventricle of nervous system | 2.07e-09 | 2 |
choroid plexus | 2.07e-09 | 2 |
brain ventricle | 2.07e-09 | 2 |
ventricular system of brain | 2.07e-09 | 2 |
ventricular system of central nervous system | 2.07e-09 | 2 |
organ component layer | 7.35e-09 | 66 |
urothelium | 2.74e-08 | 5 |
urinary system structure | 2.18e-07 | 47 |
egg chorion | 2.22e-07 | 3 |
renal system | 3.38e-07 | 48 |
transitional epithelium | 5.61e-07 | 6 |