FFCP PHASE1:Hg19::chr10:115312841..115312874,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3026 | |EntrezGene=3026 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4798 | |HGNC=4798 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z8Q5 | |UniProt=B7Z8Q5 | ||
|association_with_transcript=10bp_to_ENST00000541666_5end | |association_with_transcript=10bp_to_ENST00000541666_5end | ||
|cluster_id=chr10:115312841..115312874,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_3_at_HABP2_5end | |description=CAGE_peak_3_at_HABP2_5end | ||
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|ontology_enrichment_celltype=CL:0002322!7.36e-13!5;CL:0000181!1.32e-08!12;CL:0000417!1.32e-08!12;CL:0000668!1.32e-08!12;CL:0000414!1.32e-08!12;CL:0000412!1.32e-08!12;CL:0000182!1.32e-08!12;CL:1000507!1.03e-07!12;CL:1000494!1.03e-07!12;CL:1000497!4.31e-07!18;CL:0002518!4.31e-07!18 | |ontology_enrichment_celltype=CL:0002322!7.36e-13!5;CL:0000181!1.32e-08!12;CL:0000417!1.32e-08!12;CL:0000668!1.32e-08!12;CL:0000414!1.32e-08!12;CL:0000412!1.32e-08!12;CL:0000182!1.32e-08!12;CL:1000507!1.03e-07!12;CL:1000494!1.03e-07!12;CL:1000497!4.31e-07!18;CL:0002518!4.31e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.50e-11;12!CL:0000313;1.62e-09;1!CL:0002322;3.39e-07;5 | |ontology_enrichment_celltype_v019=CL:0000182;2.50e-11;12!CL:0000313;1.62e-09;1!CL:0002322;3.39e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.50e-11,12;CL:0000313,1.69e-09,1;CL:0002322,3.56e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.34e-12;11!UBERON:0009497;1.77e-10;13!UBERON:0006242;9.43e-10;1!UBERON:0003104;6.72e-09;31 | |ontology_enrichment_development_v019=UBERON:0004161;2.34e-12;11!UBERON:0009497;1.77e-10;13!UBERON:0006242;9.43e-10;1!UBERON:0003104;6.72e-09;31 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2152;1.62e-09;1 | |ontology_enrichment_disease_v019=DOID:2152;1.62e-09;1 | ||
|ontology_enrichment_disease_v019_2=DOID:2152,1.69e-09,1 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002107;1.91e-20;19!UBERON:0006925;1.91e-20;19!UBERON:0002423;5.00e-20;25!UBERON:0002365;2.43e-12;31!UBERON:0002330;2.43e-12;31!UBERON:0002368;9.35e-11;33!UBERON:0004911;1.62e-09;1!UBERON:0006834;4.32e-09;1!UBERON:0005172;4.59e-09;52!UBERON:0005173;4.59e-09;52!UBERON:0000949;1.84e-08;43!UBERON:0002108;3.39e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0002107;1.91e-20;19!UBERON:0006925;1.91e-20;19!UBERON:0002423;5.00e-20;25!UBERON:0002365;2.43e-12;31!UBERON:0002330;2.43e-12;31!UBERON:0002368;9.35e-11;33!UBERON:0004911;1.62e-09;1!UBERON:0006834;4.32e-09;1!UBERON:0005172;4.59e-09;52!UBERON:0005173;4.59e-09;52!UBERON:0000949;1.84e-08;43!UBERON:0002108;3.39e-07;4 | ||
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|short_description=p3@HABP2 | |short_description=p3@HABP2 | ||
}} | }} |
Latest revision as of 11:51, 16 September 2015
Short description: | p3@HABP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HABP2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 10bp_to_ENST00000541666_5end |
EntrezGene: | HABP2 |
HGNC: | 4798 |
UniProt: | B7Z8Q5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.50e-11 | 12 |
serous secreting cell | 1.69e-09 | 1 |
embryonic stem cell | 3.56e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
liver | 1.83e-20 | 19 |
digestive gland | 1.83e-20 | 19 |
liver bud | 1.83e-20 | 19 |
epithelium of foregut-midgut junction | 4.81e-20 | 25 |
anatomical boundary | 4.81e-20 | 25 |
hepatobiliary system | 4.81e-20 | 25 |
foregut-midgut junction | 4.81e-20 | 25 |
septum transversum | 4.81e-20 | 25 |
hepatic diverticulum | 1.43e-17 | 22 |
liver primordium | 1.43e-17 | 22 |
digestive tract diverticulum | 8.95e-17 | 23 |
epithelial sac | 2.27e-15 | 25 |
sac | 9.47e-15 | 26 |
gut epithelium | 1.65e-13 | 54 |
exocrine gland | 3.04e-12 | 31 |
exocrine system | 3.04e-12 | 31 |
abdomen element | 5.31e-11 | 54 |
abdominal segment element | 5.31e-11 | 54 |
endocrine gland | 9.40e-11 | 35 |
endocrine system | 1.20e-10 | 45 |
abdominal segment of trunk | 9.15e-10 | 60 |
abdomen | 9.15e-10 | 60 |
epithelium of female gonad | 1.69e-09 | 1 |
uterus or analog | 4.15e-09 | 1 |
endo-epithelium | 2.39e-08 | 82 |
gland | 8.85e-08 | 59 |
small intestine | 2.94e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.69e-09 | 1 |