FFCP PHASE1:Hg19::chr14:91976607..91976661,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55671 | |EntrezGene=55671 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20219 | |HGNC=20219 | ||
|TSSclassifier=strong | |||
|UniProt=G3V4R3,Q6IN85 | |UniProt=G3V4R3,Q6IN85 | ||
|association_with_transcript=0bp_to_ENST00000337238,ENST00000428424,ENST00000554511,NM_032560,uc001xzm.2_5end | |association_with_transcript=0bp_to_ENST00000337238,ENST00000428424,ENST00000554511,NM_032560,uc001xzm.2_5end | ||
|cluster_id=chr14:91976607..91976661,- | |||
|description=CAGE_peak_1_at_SMEK1_5end | |description=CAGE_peak_1_at_SMEK1_5end | ||
|id=chr14:91976607..91976661,- | |id=chr14:91976607..91976661,- | ||
|ontology_enrichment_celltype=CL:0000738!2.27e-16!140;CL:0002031!6.06e-16!124;CL:0000037!2.45e-15!172;CL:0000566!2.45e-15!172;CL:0002087!4.45e-14!119;CL:0000988!2.19e-13!182;CL:0002032!4.56e-13!165;CL:0000837!4.56e-13!165;CL:0000542!6.40e-11!53;CL:0000051!6.40e-11!53;CL:0000838!7.50e-11!52 | |ontology_enrichment_celltype=CL:0000738!2.27e-16!140;CL:0002031!6.06e-16!124;CL:0000037!2.45e-15!172;CL:0000566!2.45e-15!172;CL:0002087!4.45e-14!119;CL:0000988!2.19e-13!182;CL:0002032!4.56e-13!165;CL:0000837!4.56e-13!165;CL:0000542!6.40e-11!53;CL:0000051!6.40e-11!53;CL:0000838!7.50e-11!52 | ||
|ontology_enrichment_celltype_v019=CL:0000542;8.27e-07;53 | |ontology_enrichment_celltype_v019=CL:0000542;8.27e-07;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,9.17e-16,136;CL:0002031,2.40e-15,120;CL:0000037,9.74e-15,168;CL:0002087,1.70e-13,115;CL:0000988,3.78e-13,177;CL:0002032,1.69e-12,161;CL:0000837,1.69e-12,161;CL:0000542,6.40e-11,53;CL:0000051,6.40e-11,53;CL:0000838,7.50e-11,52 | |||
|ontology_enrichment_development_v019=CL:0000051;8.27e-07;53 | |ontology_enrichment_development_v019=CL:0000051;8.27e-07;53 | ||
|ontology_enrichment_disease=DOID:0050687!7.85e-07!143 | |ontology_enrichment_disease=DOID:0050687!7.85e-07!143 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:0050687,7.85e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.86e-07!115 | |ontology_enrichment_uberon=UBERON:0007023!1.86e-07!115 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.78e-07,114 | |||
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| ||
|short_description=p1@SMEK1 | |short_description=p1@SMEK1 | ||
}} | }} |
Latest revision as of 13:36, 16 September 2015
Short description: | p1@SMEK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SMEK1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000337238, ENST00000428424, ENST00000554511, NM_032560, uc001xzm.2_5end |
EntrezGene: | SMEK1 |
HGNC: | 20219 |
UniProt: | G3V4R3Q6IN85 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 9.17e-16 | 136 |
hematopoietic lineage restricted progenitor cell | 2.40e-15 | 120 |
hematopoietic stem cell | 9.74e-15 | 168 |
nongranular leukocyte | 1.70e-13 | 115 |
hematopoietic cell | 3.78e-13 | 177 |
hematopoietic oligopotent progenitor cell | 1.69e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.69e-12 | 161 |
lymphocyte | 6.40e-11 | 53 |
common lymphoid progenitor | 6.40e-11 | 53 |
lymphoid lineage restricted progenitor cell | 7.50e-11 | 52 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.78e-07 | 114 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 7.85e-07 | 143 |