FFCP PHASE1:Hg19::chr13:42976000..42976034,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:42976000..42976034,+ | |||
|coexpression_cluster_id=C148 | |coexpression_cluster_id=C148 | ||
|description=CAGE_peak_at_chr13:42976000..42976034,+ | |description=CAGE_peak_at_chr13:42976000..42976034,+ | ||
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|ontology_enrichment_celltype=CL:0000313!5.38e-13!1;CL:0000945!3.91e-12!24;CL:0000826!3.91e-12!24;CL:0000080!8.24e-09!6;CL:0000838!9.34e-08!52;CL:0000542!1.33e-07!53;CL:0000051!1.33e-07!53;CL:0001014!2.58e-07!2;CL:0001016!2.58e-07!2;CL:0000159!3.93e-07!2 | |ontology_enrichment_celltype=CL:0000313!5.38e-13!1;CL:0000945!3.91e-12!24;CL:0000826!3.91e-12!24;CL:0000080!8.24e-09!6;CL:0000838!9.34e-08!52;CL:0000542!1.33e-07!53;CL:0000051!1.33e-07!53;CL:0001014!2.58e-07!2;CL:0001016!2.58e-07!2;CL:0000159!3.93e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000081;2.63e-07;11 | |ontology_enrichment_celltype_v019=CL:0000081;2.63e-07;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000081,2.63e-07,11 | |||
|ontology_enrichment_development_v019=UBERON:0003918;2.08e-27;10!UBERON:0007687;2.08e-27;10!UBERON:0003104;5.96e-10;31 | |ontology_enrichment_development_v019=UBERON:0003918;2.08e-27;10!UBERON:0007687;2.08e-27;10!UBERON:0003104;5.96e-10;31 | ||
|ontology_enrichment_disease=DOID:630!2.95e-13!1;DOID:0050177!2.95e-13!1;DOID:0050427!2.95e-13!1;DOID:0060060!3.76e-13!1;DOID:0060061!3.76e-13!1;DOID:8691!3.76e-13!1;DOID:2152!5.38e-13!1 | |ontology_enrichment_disease=DOID:630!2.95e-13!1;DOID:0050177!2.95e-13!1;DOID:0050427!2.95e-13!1;DOID:0060060!3.76e-13!1;DOID:0060061!3.76e-13!1;DOID:8691!3.76e-13!1;DOID:2152!5.38e-13!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004911!5.38e-13!1;UBERON:0004909!3.93e-07!2 | |ontology_enrichment_uberon=UBERON:0004911!5.38e-13!1;UBERON:0004909!3.93e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0002113;3.75e-12;24!UBERON:0011143;3.75e-12;24!UBERON:0000489;2.96e-10;29!UBERON:0006554;5.96e-10;30!UBERON:0001008;5.96e-10;30!UBERON:0002331;6.56e-08;10 | |ontology_enrichment_uberon_v019=UBERON:0002113;3.75e-12;24!UBERON:0011143;3.75e-12;24!UBERON:0000489;2.96e-10;29!UBERON:0006554;5.96e-10;30!UBERON:0001008;5.96e-10;30!UBERON:0002331;6.56e-08;10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,2.63e-11,26;UBERON:0003918,2.63e-11,26;UBERON:0011143,2.63e-11,26;UBERON:0005095,2.63e-11,26;UBERON:0007687,2.63e-11,26;UBERON:0000489,1.15e-09,31;UBERON:0002331,6.56e-08,10;UBERON:0000358,6.56e-08,10;UBERON:0000307,6.56e-08,10;UBERON:0000091,6.56e-08,10;UBERON:0000087,6.56e-08,10;UBERON:0007010,6.56e-08,10;UBERON:0007806,6.56e-08,10;UBERON:0008780,6.56e-08,10;UBERON:0005728,6.56e-08,10;UBERON:0006554,9.72e-07,47 | |||
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|short_description=p@chr13:42976000..42976034,+ | |short_description=p@chr13:42976000..42976034,+ | ||
}} | }} |
Latest revision as of 16:06, 24 July 2015
Short description: | p@chr13:42976000..42976034, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:42976000..42976034, + |
Coexpression cluster: | C148_kidney_small_epididymis_pancreas_serous_duodenum_temporal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood cell | 2.63e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
kidney | 2.63e-11 | 26 |
kidney mesenchyme | 2.63e-11 | 26 |
upper urinary tract | 2.63e-11 | 26 |
kidney rudiment | 2.63e-11 | 26 |
kidney field | 2.63e-11 | 26 |
cavitated compound organ | 1.15e-09 | 31 |
umbilical cord | 6.56e-08 | 10 |
blastocyst | 6.56e-08 | 10 |
blastula | 6.56e-08 | 10 |
bilaminar disc | 6.56e-08 | 10 |
inner cell mass | 6.56e-08 | 10 |
cleaving embryo | 6.56e-08 | 10 |
connecting stalk | 6.56e-08 | 10 |
inner cell mass derived epiblast | 6.56e-08 | 10 |
extraembryonic mesoderm | 6.56e-08 | 10 |
urinary system structure | 9.72e-07 | 47 |