FFCP PHASE1:Hg19::chr3:154741971..154742004,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4311 | |EntrezGene=4311 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7154 | |HGNC=7154 | ||
|TSSclassifier=strong | |||
|UniProt=P08473 | |UniProt=P08473 | ||
|association_with_transcript=58bp_to_ENST00000492661,uc010hvr.1_5end | |association_with_transcript=58bp_to_ENST00000492661,uc010hvr.1_5end | ||
|cluster_id=chr3:154741971..154742004,+ | |||
|coexpression_cluster_id=C50 | |coexpression_cluster_id=C50 | ||
|description=CAGE_peak_11_at_MME_5end | |description=CAGE_peak_11_at_MME_5end | ||
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|ontology_enrichment_celltype=CL:0002620!3.74e-12!23;CL:0000057!1.43e-11!75;CL:0000055!1.69e-11!180;CL:0002537!3.09e-07!5 | |ontology_enrichment_celltype=CL:0002620!3.74e-12!23;CL:0000057!1.43e-11!75;CL:0000055!1.69e-11!180;CL:0002537!3.09e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000349;2.18e-27;19!CL:0002537;6.66e-13;5!CL:0000197;7.88e-11;6!CL:0000098;7.88e-11;6!CL:0002167;7.88e-11;6!CL:0002541;1.61e-09;3!CL:0002620;7.56e-09;23!CL:0002580;1.30e-07;3!CL:0002569;4.54e-07;6!CL:0002588;8.89e-07;2 | |ontology_enrichment_celltype_v019=CL:0000349;2.18e-27;19!CL:0002537;6.66e-13;5!CL:0000197;7.88e-11;6!CL:0000098;7.88e-11;6!CL:0002167;7.88e-11;6!CL:0002541;1.61e-09;3!CL:0002620;7.56e-09;23!CL:0002580;1.30e-07;3!CL:0002569;4.54e-07;6!CL:0002588;8.89e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.90e-27,19;CL:0002537,6.44e-13,5;CL:0000197,8.25e-11,6;CL:0000098,8.25e-11,6;CL:0002167,8.25e-11,6;CL:0002541,1.62e-09,3;CL:0002620,6.33e-09,23;CL:0002580,6.27e-08,3;CL:0002569,4.20e-07,6;CL:0002588,8.91e-07,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;3.42e-08;5!DOID:450;3.42e-08;5!DOID:66;3.42e-08;5!DOID:423;3.42e-08;5!DOID:0080000;3.42e-08;5!DOID:11722;3.42e-08;5 | |ontology_enrichment_disease_v019=DOID:17;3.42e-08;5!DOID:450;3.42e-08;5!DOID:66;3.42e-08;5!DOID:423;3.42e-08;5!DOID:0080000;3.42e-08;5!DOID:11722;3.42e-08;5 | ||
|ontology_enrichment_disease_v019_2=DOID:17,3.93e-08,5;DOID:450,3.93e-08,5;DOID:66,3.93e-08,5;DOID:423,3.93e-08,5;DOID:0080000,3.93e-08,5;DOID:11722,3.93e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0005631!1.59e-16!14;UBERON:0000158!1.59e-16!14;UBERON:0000478!1.36e-15!24;UBERON:0003124!1.61e-09!7;UBERON:0000305!1.19e-08!7;UBERON:0004871!2.32e-07!8 | |ontology_enrichment_uberon=UBERON:0005631!1.59e-16!14;UBERON:0000158!1.59e-16!14;UBERON:0000478!1.36e-15!24;UBERON:0003124!1.61e-09!7;UBERON:0000305!1.19e-08!7;UBERON:0004871!2.32e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;4.42e-24;24!UBERON:0005631;4.19e-20;10!UBERON:0000158;4.19e-20;10!UBERON:0000305;1.45e-12;7!UBERON:0000310;1.64e-10;10!UBERON:0003124;1.61e-09;3!UBERON:0000920;1.61e-09;3!UBERON:0001443;1.83e-09;11!UBERON:0003422;4.54e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0000478;4.42e-24;24!UBERON:0005631;4.19e-20;10!UBERON:0000158;4.19e-20;10!UBERON:0000305;1.45e-12;7!UBERON:0000310;1.64e-10;10!UBERON:0003124;1.61e-09;3!UBERON:0000920;1.61e-09;3!UBERON:0001443;1.83e-09;11!UBERON:0003422;4.54e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,9.24e-25,14;UBERON:0000158,9.24e-25,14;UBERON:0000478,3.95e-24,24;UBERON:0003124,6.02e-14,7;UBERON:0000305,1.71e-12,7;UBERON:0000310,7.43e-11,10;UBERON:0004871,7.77e-11,8;UBERON:0001443,8.99e-10,11;UBERON:0000920,1.62e-09,3;UBERON:0003422,4.20e-07,6 | |||
|phase1_expression=2.90685406832891,1.49870366723688,1.69145284915165,8.00586386825043,0.446961094427288,0,2.53299878168311,0,0,0,0,1.09220686065086,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,2.00535164254356,2.17269778441236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0.805658634218294,0.760272105718513,0,1.10298924103761,0,1.25019619597712,0.673588117878509,0.450445921933289,0,0,0.549605231791222,0,0,0,0,0,0.662045904066094,0,0,0,0,0,3.11211035399766,0.808264032418128,0.490385709340376,0,0,0.70296429550139,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0.125118519871964,0.277064115484183,0.438977620880838,0,0.150238058906597,0,1.07633781413317,13.2405581067512,4.66250182551036,0.300091096084402,1.44273540933814,10.5632621418708,8.74749224758472,0.675105328965065,2.53336213419116,0.504867548488229,2.66944706062668,1.77810662500693,1.42003837006646,0.503760491138201,0.339121184620975,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,8.8229906326076,6.49691533502627,0,0,0,0.220587945464788,0.217879444092406,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,1.02940686179115,0,0,0,0,2.28065813717227,0,0,0,0,0.144366447761074,0,0,1.58040879591855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0.102827492703324,17.4198973549472,0.285826432630578,0,0,0.2933531432838,1.42198887333556,0,0,3.45719551560332,2.08014873822732,0,0,0,0.857867961948885,16.2786481617433,3.29296134712308,0,0,4.75171123760058,0.301439377059586,0,0,0,0,0,0.239624855491583,0,0,0.434343920002738,0.410952645100767,2.68591444859843,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,3.74347550755453,4.10386674233472,20.6590163694454,7.9656162195045,1.50473049863859,0,0,0,0,0.695068915744663,0,0,0,0,0,0.303127571446259,1.66435439510497,6.04780586659361,2.48107807818777,1.84154367945675,1.96462066103151,0.512556597022804,5.11707249066703,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.256858515908,0,0,0,0,0,0,0,0,0,0.107420244868274,0.145016693914229,0,0,0,0,0,0,0.464845549297286,1.25924938732256,0,0,0,0,0,0,0.744316738719335,1.2655176988749,0.762520775695299,0,0,0.318203247925937,0,0.539617372749944,1.09814811894422,0.471249609382746,0,0,0,0,0.487426979262569,0,0.272999822815972,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0,0,18.0698303777105,72.6060413086965,0,0.709522128141196,0,0,2.27683904259429,0.699869440489966,0,0,0,20.899923772445,0,0,0,0,0,0,0,0,0,0,0,0,7.1572127655407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0.146508179271894,0.849523652246594,0,0,47.9876414322757,1.48482340416319,6.14321404198464,0,0,0.222617410045812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22443999994674,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0.653630781113941,0,0,0,150.097101756627,2.06442582142476,3.80265801727028,261.261949820442,62.1947659198645,336.344943667759,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,1.20054501294127,0,0,0.664653872707185,0,0,0,0,0.693373365065693,0,0,0,0,0.171986032471617,0,0.219267951258557,0,0,0,0.677942222341597,0.137041924646751,0,0,0.391102765469606,0,0,0,0,0,0,0,0.124252535565433,0.235694034616795,1.63085047288337,2.09205692624666,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,5.37362552494447,0,0,0,1.08599920350743,0,1.30634944043764,0,0,0,0,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568209015825267,0.50313580350515,0.889811221596536,0.228840068396924,0.151230923763239,0,0.147855149989634,0,0,0,0,0,0,0.450772826991655,0.380805212168795,0,0,0,0,0,0,0,0,1.26184898228651,0,2.35885750512418,0,0,0,0.244736704506468,0,0,0,0,2.50788249752189,0,0,0,3.03859956177382,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,1.24415452006595,0,0,0,0,1.01839517972415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.2858418357739,2.45657876265145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,55.9711955726251,0,0,0,0,0,0,0.078493092850514,0,0.840816489941367,0,0,0,0.0714765441766563,0,0,0.347716544605159,0,0.828864656652147,0,0,0,0.236664001461131,0.170426809518315,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,1.11598505450025,0.924351257262837,0.432626562123789,0,0,3.16746252528592,1.01988829741982,0,0.459474497674225,0,0,0,0,0,0,0,0,0,0,1.0820016907288,0,0,0,0,0,0,0,0.426909383510862,0,0,0,0,0.406896178315738,0,0,0 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| ||
|short_description=p11@MME | |short_description=p11@MME | ||
}} | }} |
Latest revision as of 04:32, 16 September 2015
Short description: | p11@MME |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_MME_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 58bp_to_ENST00000492661, uc010hvr.1_5end |
EntrezGene: | MME |
HGNC: | 7154 |
UniProt: | P08473 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.90e-27 | 19 |
amnion mesenchymal stem cell | 6.44e-13 | 5 |
receptor cell | 8.25e-11 | 6 |
sensory epithelial cell | 8.25e-11 | 6 |
olfactory epithelial cell | 8.25e-11 | 6 |
chorionic membrane mesenchymal stem cell | 1.62e-09 | 3 |
skin fibroblast | 6.33e-09 | 23 |
preadipocyte of the breast | 6.27e-08 | 3 |
mesenchymal stem cell of umbilical cord | 4.20e-07 | 6 |
smooth muscle cell of the umbilical vein | 8.91e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 9.24e-25 | 14 |
membranous layer | 9.24e-25 | 14 |
extraembryonic structure | 3.95e-24 | 24 |
chorion | 6.02e-14 | 7 |
amnion | 1.71e-12 | 7 |
breast | 7.43e-11 | 10 |
somatic layer of lateral plate mesoderm | 7.77e-11 | 8 |
chest | 8.99e-10 | 11 |
egg chorion | 1.62e-09 | 3 |
mesenchyme of umbilical cord | 4.20e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.93e-08 | 5 |
myotonic disease | 3.93e-08 | 5 |
muscle tissue disease | 3.93e-08 | 5 |
myopathy | 3.93e-08 | 5 |
muscular disease | 3.93e-08 | 5 |
myotonic dystrophy | 3.93e-08 | 5 |