FFCP PHASE1:Hg19::chr1:44446555..44446566,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8704 | |EntrezGene=8704 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=925 | |HGNC=925 | ||
|TSSclassifier=strong | |||
|UniProt=O60909 | |UniProt=O60909 | ||
|association_with_transcript=-217bp_to_AF038660_5end | |association_with_transcript=-217bp_to_AF038660_5end | ||
|cluster_id=chr1:44446555..44446566,+ | |||
|description=CAGE_peak_16_at_B4GALT2_5end | |description=CAGE_peak_16_at_B4GALT2_5end | ||
|id=chr1:44446555..44446566,+ | |id=chr1:44446555..44446566,+ | ||
|ontology_enrichment_celltype=CL:0002368!7.00e-22!13;CL:0000066!1.27e-21!254;CL:0002076!3.88e-18!43;CL:0002159!1.90e-17!13;CL:0002202!3.87e-12!9;CL:0002632!3.87e-12!9;CL:0000223!5.78e-12!59;CL:0000349!1.48e-10!3;CL:0002577!1.48e-10!3;CL:0002328!2.22e-10!3;CL:0002621!3.01e-10!3;CL:0000068!6.05e-10!3;CL:0000069!6.05e-10!3;CL:0000307!6.05e-10!3;CL:0000377!6.05e-10!3;CL:0000362!1.51e-09!8;CL:0002327!1.70e-07!4;CL:0002077!3.01e-07!33;CL:0000317!3.10e-07!2;CL:1000448!3.10e-07!2;CL:0002308!3.10e-07!2;CL:0000575!3.10e-07!2;CL:0002140!3.10e-07!2 | |ontology_enrichment_celltype=CL:0002368!7.00e-22!13;CL:0000066!1.27e-21!254;CL:0002076!3.88e-18!43;CL:0002159!1.90e-17!13;CL:0002202!3.87e-12!9;CL:0002632!3.87e-12!9;CL:0000223!5.78e-12!59;CL:0000349!1.48e-10!3;CL:0002577!1.48e-10!3;CL:0002328!2.22e-10!3;CL:0002621!3.01e-10!3;CL:0000068!6.05e-10!3;CL:0000069!6.05e-10!3;CL:0000307!6.05e-10!3;CL:0000377!6.05e-10!3;CL:0000362!1.51e-09!8;CL:0002327!1.70e-07!4;CL:0002077!3.01e-07!33;CL:0000317!3.10e-07!2;CL:1000448!3.10e-07!2;CL:0002308!3.10e-07!2;CL:0000575!3.10e-07!2;CL:0002140!3.10e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002328;1.70e-27;3!CL:0002202;1.62e-20;9!CL:0002632;1.62e-20;9!CL:0000312;5.67e-17;5!CL:0002368;1.98e-14;13!CL:0000240;2.57e-14;6!CL:0000311;2.57e-14;6!CL:0000079;2.57e-14;6!CL:0000237;2.57e-14;6!CL:0002159;1.82e-13;14!CL:0000575;3.18e-11;2!CL:0000362;7.24e-10;9!CL:0002577;6.56e-08;3!CL:0000307;6.56e-08;3 | |ontology_enrichment_celltype_v019=CL:0002328;1.70e-27;3!CL:0002202;1.62e-20;9!CL:0002632;1.62e-20;9!CL:0000312;5.67e-17;5!CL:0002368;1.98e-14;13!CL:0000240;2.57e-14;6!CL:0000311;2.57e-14;6!CL:0000079;2.57e-14;6!CL:0000237;2.57e-14;6!CL:0002159;1.82e-13;14!CL:0000575;3.18e-11;2!CL:0000362;7.24e-10;9!CL:0002577;6.56e-08;3!CL:0000307;6.56e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002328,1.22e-27,3;CL:0002202,1.73e-20,9;CL:0002632,1.73e-20,9;CL:0000312,5.45e-17,5;CL:0002368,2.08e-14,13;CL:0000240,2.49e-14,6;CL:0000311,2.49e-14,6;CL:0000079,2.49e-14,6;CL:0000237,2.49e-14,6;CL:0000036,2.49e-14,6;CL:0000357,2.49e-14,6;CL:0000114,2.49e-14,6;CL:0002159,1.98e-13,14;CL:0000575,4.09e-11,2;CL:0000362,7.08e-10,9;CL:0002577,5.18e-08,3;CL:0000068,8.29e-08,3;CL:0000069,8.29e-08,3;CL:0000307,8.29e-08,3;CL:0000377,8.29e-08,3;CL:0000066,2.35e-07,253 | |||
|ontology_enrichment_development_v019=CL:0000357;2.57e-14;6!CL:0000114;2.57e-14;6!CL:0000377;6.56e-08;3 | |ontology_enrichment_development_v019=CL:0000357;2.57e-14;6!CL:0000114;2.57e-14;6!CL:0000377;6.56e-08;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!1.75e-14!9;UBERON:0004119!3.13e-14!169;UBERON:0000925!3.13e-14!169;UBERON:0006595!3.13e-14!169;UBERON:0001004!4.48e-14!72;UBERON:0000065!2.13e-13!53;UBERON:0008947!7.94e-12!38;UBERON:0003258!7.94e-12!38;UBERON:0004815!2.22e-10!3;UBERON:0002031!2.22e-10!3;UBERON:0001949!3.01e-10!3;UBERON:0007196!7.95e-10!14;UBERON:0001558!7.95e-10!14;UBERON:0000072!3.30e-09!46;UBERON:0000077!1.42e-08!130;UBERON:0001987!5.38e-08!4;UBERON:0004340!5.38e-08!4;UBERON:0002185!7.24e-08!4;UBERON:0001911!1.70e-07!4;UBERON:0005333!1.70e-07!4;UBERON:0008425!1.70e-07!4;UBERON:0005311!1.70e-07!4;UBERON:0001007!1.88e-07!155;UBERON:0001555!1.88e-07!155;UBERON:0007026!1.88e-07!155;UBERON:0002419!3.10e-07!2;UBERON:0007771!3.10e-07!2;UBERON:0003297!3.10e-07!2;UBERON:0001821!3.10e-07!2;UBERON:0003487!3.10e-07!2;UBERON:0001820!3.10e-07!2;UBERON:0005089!3.10e-07!2;UBERON:0005088!3.10e-07!2;UBERON:0003126!6.20e-07!7;UBERON:0001005!6.20e-07!7 | |ontology_enrichment_uberon=UBERON:0001737!1.75e-14!9;UBERON:0004119!3.13e-14!169;UBERON:0000925!3.13e-14!169;UBERON:0006595!3.13e-14!169;UBERON:0001004!4.48e-14!72;UBERON:0000065!2.13e-13!53;UBERON:0008947!7.94e-12!38;UBERON:0003258!7.94e-12!38;UBERON:0004815!2.22e-10!3;UBERON:0002031!2.22e-10!3;UBERON:0001949!3.01e-10!3;UBERON:0007196!7.95e-10!14;UBERON:0001558!7.95e-10!14;UBERON:0000072!3.30e-09!46;UBERON:0000077!1.42e-08!130;UBERON:0001987!5.38e-08!4;UBERON:0004340!5.38e-08!4;UBERON:0002185!7.24e-08!4;UBERON:0001911!1.70e-07!4;UBERON:0005333!1.70e-07!4;UBERON:0008425!1.70e-07!4;UBERON:0005311!1.70e-07!4;UBERON:0001007!1.88e-07!155;UBERON:0001555!1.88e-07!155;UBERON:0007026!1.88e-07!155;UBERON:0002419!3.10e-07!2;UBERON:0007771!3.10e-07!2;UBERON:0003297!3.10e-07!2;UBERON:0001821!3.10e-07!2;UBERON:0003487!3.10e-07!2;UBERON:0001820!3.10e-07!2;UBERON:0005089!3.10e-07!2;UBERON:0005088!3.10e-07!2;UBERON:0003126!6.20e-07!7;UBERON:0001005!6.20e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0004815;1.70e-27;3!UBERON:0002031;1.70e-27;3!UBERON:0000997;4.66e-21;1!UBERON:0005056;4.66e-21;1!UBERON:0004176;4.66e-21;1!UBERON:0002185;6.15e-17;5!UBERON:0007196;1.35e-12;15!UBERON:0001558;1.35e-12;15!UBERON:0000485;2.18e-12;7 | |ontology_enrichment_uberon_v019=UBERON:0004815;1.70e-27;3!UBERON:0002031;1.70e-27;3!UBERON:0000997;4.66e-21;1!UBERON:0005056;4.66e-21;1!UBERON:0004176;4.66e-21;1!UBERON:0002185;6.15e-17;5!UBERON:0007196;1.35e-12;15!UBERON:0001558;1.35e-12;15!UBERON:0000485;2.18e-12;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,1.22e-27,3;UBERON:0002031,1.22e-27,3;UBERON:0000997,5.16e-21,1;UBERON:0005056,5.16e-21,1;UBERON:0002185,5.03e-17,5;UBERON:0007196,1.41e-12,15;UBERON:0001558,1.41e-12,15;UBERON:0000485,6.78e-10,9;UBERON:0005157,4.20e-07,47 | |||
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| ||
|short_description=p16@B4GALT2 | |short_description=p16@B4GALT2 | ||
}} | }} |
Latest revision as of 05:41, 18 September 2015
Short description: | p16@B4GALT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_B4GALT2_5end |
Coexpression cluster: | NA |
Association with transcript: | -217bp_to_AF038660_5end |
EntrezGene: | B4GALT2 |
HGNC: | 925 |
UniProt: | O60909 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bronchial epithelial cell | 1.22e-27 | 3 |
epithelial cell of tracheobronchial tree | 1.73e-20 | 9 |
epithelial cell of lower respiratory tract | 1.73e-20 | 9 |
keratinocyte | 5.45e-17 | 5 |
respiratory epithelial cell | 2.08e-14 | 13 |
stratified squamous epithelial cell | 2.49e-14 | 6 |
keratin accumulating cell | 2.49e-14 | 6 |
stratified epithelial cell | 2.49e-14 | 6 |
keratinizing barrier epithelial cell | 2.49e-14 | 6 |
epithelial fate stem cell | 2.49e-14 | 6 |
stratified epithelial stem cell | 2.49e-14 | 6 |
surface ectodermal cell | 2.49e-14 | 6 |
general ecto-epithelial cell | 1.98e-13 | 14 |
corneal epithelial cell | 4.09e-11 | 2 |
epidermal cell | 7.08e-10 | 9 |
placental epithelial cell | 5.18e-08 | 3 |
duct epithelial cell | 8.29e-08 | 3 |
branched duct epithelial cell | 8.29e-08 | 3 |
tracheal epithelial cell | 8.29e-08 | 3 |
tracheoblast | 8.29e-08 | 3 |
epithelial cell | 2.35e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 1.22e-27 | 3 |
epithelium of bronchus | 1.22e-27 | 3 |
mammalian vulva | 5.16e-21 | 1 |
external female genitalia | 5.16e-21 | 1 |
bronchus | 5.03e-17 | 5 |
tracheobronchial tree | 1.41e-12 | 15 |
lower respiratory tract | 1.41e-12 | 15 |
simple columnar epithelium | 6.78e-10 | 9 |
epithelial fold | 4.20e-07 | 47 |