FFCP PHASE1:Hg19::chr13:31019875..31019895,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:31019875..31019895,+ | |||
|coexpression_cluster_id=C1118 | |coexpression_cluster_id=C1118 | ||
|description=CAGE_peak_at_chr13:31019875..31019895,+ | |description=CAGE_peak_at_chr13:31019875..31019895,+ | ||
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|ontology_enrichment_celltype=CL:0000945!7.14e-30!24;CL:0000826!7.14e-30!24;CL:0000236!1.39e-19!14;CL:0000542!4.19e-10!53;CL:0000051!4.19e-10!53;CL:0000838!2.59e-09!52 | |ontology_enrichment_celltype=CL:0000945!7.14e-30!24;CL:0000826!7.14e-30!24;CL:0000236!1.39e-19!14;CL:0000542!4.19e-10!53;CL:0000051!4.19e-10!53;CL:0000838!2.59e-09!52 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.21e-107;24!CL:0000236;2.08e-54;13!CL:0000542;8.14e-32;53!CL:0000946;7.49e-08;1!CL:0000786;7.49e-08;1!CL:0002032;1.29e-07;1!CL:0000785;1.29e-07;1!CL:0000557;1.29e-07;1!CL:0000819;1.29e-07;1!CL:0000817;2.91e-07;1!CL:0002087;3.16e-07;104 | |ontology_enrichment_celltype_v019=CL:0000945;1.21e-107;24!CL:0000236;2.08e-54;13!CL:0000542;8.14e-32;53!CL:0000946;7.49e-08;1!CL:0000786;7.49e-08;1!CL:0002032;1.29e-07;1!CL:0000785;1.29e-07;1!CL:0000557;1.29e-07;1!CL:0000819;1.29e-07;1!CL:0000817;2.91e-07;1!CL:0002087;3.16e-07;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,6.46e-108,24;CL:0000826,6.46e-108,24;CL:0000236,1.95e-60,14;CL:0000542,1.96e-51,53;CL:0000051,1.96e-51,53;CL:0000838,1.58e-47,52;CL:0002087,4.69e-21,115;CL:0000817,2.75e-19,3;CL:0002031,5.94e-18,120;CL:0000738,3.92e-17,136;CL:0002032,5.58e-17,161;CL:0000837,5.58e-17,161;CL:0000037,4.49e-16,168;CL:0000988,5.14e-15,177;CL:0000785,9.74e-14,2;CL:0000955,9.74e-14,2;CL:0000818,9.74e-14,2;CL:0000954,9.74e-14,2;CL:0000816,9.74e-14,2;CL:0000946,7.50e-08,1;CL:0000786,7.50e-08,1;CL:0000980,7.50e-08,1;CL:0000819,1.42e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000051;8.14e-32;53!CL:0000954;8.84e-14;2!UBERON:0001045;8.26e-08;1 | |ontology_enrichment_development_v019=CL:0000051;8.14e-32;53!CL:0000954;8.84e-14;2!UBERON:0001045;8.26e-08;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060058;1.30e-15;10!DOID:0060073;1.29e-07;1!DOID:8675;1.29e-07;1!DOID:12603;1.29e-07;1!DOID:630;2.91e-07;1!DOID:0050177;2.91e-07;1!DOID:0050427;2.91e-07;1!DOID:2355;2.91e-07;1 | |ontology_enrichment_disease_v019=DOID:0060058;1.30e-15;10!DOID:0060073;1.29e-07;1!DOID:8675;1.29e-07;1!DOID:12603;1.29e-07;1!DOID:630;2.91e-07;1!DOID:0050177;2.91e-07;1!DOID:0050427;2.91e-07;1!DOID:2355;2.91e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.13e-15,10;DOID:12603,1.03e-07,1;DOID:0060073,1.42e-07,1;DOID:8675,1.42e-07,1;DOID:630,1.72e-07,1;DOID:0050177,1.72e-07,1;DOID:0050427,1.72e-07,1;DOID:2355,1.95e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.08e-20!115;UBERON:0002780!4.12e-08!41;UBERON:0001890!4.12e-08!41;UBERON:0006240!4.12e-08!41;UBERON:0001049!4.54e-08!57;UBERON:0005068!4.54e-08!57;UBERON:0006241!4.54e-08!57;UBERON:0007135!4.54e-08!57;UBERON:0003080!8.67e-08!42;UBERON:0002616!1.45e-07!59;UBERON:0001893!1.46e-07!34;UBERON:0002020!1.66e-07!34;UBERON:0003528!1.66e-07!34;UBERON:0001869!1.78e-07!32;UBERON:0000955!5.37e-07!69;UBERON:0006238!5.37e-07!69;UBERON:0002791!5.94e-07!33;UBERON:0002420!8.36e-07!9;UBERON:0007245!8.36e-07!9;UBERON:0010009!8.36e-07!9;UBERON:0010011!8.36e-07!9;UBERON:0000454!8.36e-07!9 | |ontology_enrichment_uberon=UBERON:0007023!3.08e-20!115;UBERON:0002780!4.12e-08!41;UBERON:0001890!4.12e-08!41;UBERON:0006240!4.12e-08!41;UBERON:0001049!4.54e-08!57;UBERON:0005068!4.54e-08!57;UBERON:0006241!4.54e-08!57;UBERON:0007135!4.54e-08!57;UBERON:0003080!8.67e-08!42;UBERON:0002616!1.45e-07!59;UBERON:0001893!1.46e-07!34;UBERON:0002020!1.66e-07!34;UBERON:0003528!1.66e-07!34;UBERON:0001869!1.78e-07!32;UBERON:0000955!5.37e-07!69;UBERON:0006238!5.37e-07!69;UBERON:0002791!5.94e-07!33;UBERON:0002420!8.36e-07!9;UBERON:0007245!8.36e-07!9;UBERON:0010009!8.36e-07!9;UBERON:0010011!8.36e-07!9;UBERON:0000454!8.36e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002372;8.26e-08;1!UBERON:0001154;8.26e-08;1!UBERON:0001153;8.26e-08;1!UBERON:0009854;8.26e-08;1!UBERON:0001961;8.26e-08;1!UBERON:0001744;8.26e-08;1!UBERON:0001042;8.26e-08;1!UBERON:0001735;8.26e-08;1 | |ontology_enrichment_uberon_v019=UBERON:0002372;8.26e-08;1!UBERON:0001154;8.26e-08;1!UBERON:0001153;8.26e-08;1!UBERON:0009854;8.26e-08;1!UBERON:0001961;8.26e-08;1!UBERON:0001744;8.26e-08;1!UBERON:0001042;8.26e-08;1!UBERON:0001735;8.26e-08;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,8.00e-08,1;UBERON:0001961,8.00e-08,1;UBERON:0001744,8.00e-08,1;UBERON:0001735,8.00e-08,1;UBERON:0001154,8.54e-08,1;UBERON:0001153,8.54e-08,1;UBERON:0001045,8.54e-08,1 | |||
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|short_description=p@chr13:31019875..31019895,+ | |short_description=p@chr13:31019875..31019895,+ | ||
}} | }} |
Latest revision as of 15:31, 24 July 2015
Short description: | p@chr13:31019875..31019895, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:31019875..31019895, + |
Coexpression cluster: | C1118_Burkitt_lymphoma_diffuse_b_acute_CD19_plasma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 6.46e-108 | 24 |
pro-B cell | 6.46e-108 | 24 |
B cell | 1.95e-60 | 14 |
lymphocyte | 1.96e-51 | 53 |
common lymphoid progenitor | 1.96e-51 | 53 |
lymphoid lineage restricted progenitor cell | 1.58e-47 | 52 |
nongranular leukocyte | 4.69e-21 | 115 |
precursor B cell | 2.75e-19 | 3 |
hematopoietic lineage restricted progenitor cell | 5.94e-18 | 120 |
leukocyte | 3.92e-17 | 136 |
hematopoietic oligopotent progenitor cell | 5.58e-17 | 161 |
hematopoietic multipotent progenitor cell | 5.58e-17 | 161 |
hematopoietic stem cell | 4.49e-16 | 168 |
hematopoietic cell | 5.14e-15 | 177 |
mature B cell | 9.74e-14 | 2 |
pre-B-II cell | 9.74e-14 | 2 |
transitional stage B cell | 9.74e-14 | 2 |
small pre-B-II cell | 9.74e-14 | 2 |
immature B cell | 9.74e-14 | 2 |
antibody secreting cell | 7.50e-08 | 1 |
plasma cell | 7.50e-08 | 1 |
plasmablast | 7.50e-08 | 1 |
B-1 B cell | 1.42e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
tonsil | 8.00e-08 | 1 |
mucosa-associated lymphoid tissue | 8.00e-08 | 1 |
lymphoid tissue | 8.00e-08 | 1 |
tonsillar ring | 8.00e-08 | 1 |
vermiform appendix | 8.54e-08 | 1 |
caecum | 8.54e-08 | 1 |
midgut | 8.54e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.13e-15 | 10 |
acute leukemia | 1.03e-07 | 1 |
lymphatic system cancer | 1.42e-07 | 1 |
lymphosarcoma | 1.42e-07 | 1 |
genetic disease | 1.72e-07 | 1 |
monogenic disease | 1.72e-07 | 1 |
xeroderma pigmentosum | 1.72e-07 | 1 |
anemia | 1.95e-07 | 1 |