FFCP PHASE1:Hg19::chr15:66161871..66161893,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8766 | |EntrezGene=8766 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9760 | |HGNC=9760 | ||
|TSSclassifier=strong | |||
|UniProt=P62491 | |UniProt=P62491 | ||
|association_with_transcript=41bp_to_ENST00000435304_5end | |association_with_transcript=41bp_to_ENST00000435304_5end | ||
|cluster_id=chr15:66161871..66161893,+ | |||
|description=CAGE_peak_2_at_RAB11A_5end | |description=CAGE_peak_2_at_RAB11A_5end | ||
|id=chr15:66161871..66161893,+ | |id=chr15:66161871..66161893,+ | ||
|ontology_enrichment_celltype=CL:0002139!1.35e-10!24;CL:0000213!5.07e-08!57;CL:0000215!5.07e-08!57;CL:0000076!6.87e-08!62;CL:0000071!3.36e-07!18;CL:0002546!3.36e-07!18;CL:0000945!7.07e-07!24;CL:0000826!7.07e-07!24 | |ontology_enrichment_celltype=CL:0002139!1.35e-10!24;CL:0000213!5.07e-08!57;CL:0000215!5.07e-08!57;CL:0000076!6.87e-08!62;CL:0000071!3.36e-07!18;CL:0002546!3.36e-07!18;CL:0000945!7.07e-07!24;CL:0000826!7.07e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.47e-10;24!CL:0000071;3.71e-07;18!CL:0000945;7.22e-07;24 | |ontology_enrichment_celltype_v019=CL:0002139;1.47e-10;24!CL:0000071;3.71e-07;18!CL:0000945;7.22e-07;24 | ||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.35e-10,24;CL:0000213,2.36e-08,58;CL:0000215,2.36e-08,58;CL:0000076,1.79e-07,63;CL:0000071,3.36e-07,18;CL:0002546,3.36e-07,18;CL:0000945,7.07e-07,24;CL:0000826,7.07e-07,24 | |||
|ontology_enrichment_development_v019=CL:0002546;3.71e-07;18 | |ontology_enrichment_development_v019=CL:0002546;3.71e-07;18 | ||
|ontology_enrichment_disease=DOID:0050686!1.69e-09!137;DOID:14566!2.82e-08!239;DOID:162!1.66e-07!235 | |ontology_enrichment_disease=DOID:0050686!1.69e-09!137;DOID:14566!2.82e-08!239;DOID:162!1.66e-07!235 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:0050686,1.69e-09,137;DOID:14566,2.82e-08,239;DOID:162,1.66e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0004535!2.67e-10!110;UBERON:0001009!1.53e-09!113;UBERON:0000487!2.16e-07!22;UBERON:0001986!3.36e-07!18;UBERON:0004638!3.36e-07!18;UBERON:0004852!3.36e-07!18;UBERON:0002049!5.35e-07!79;UBERON:0007798!5.35e-07!79;UBERON:0006914!8.18e-07!25 | |ontology_enrichment_uberon=UBERON:0004535!2.67e-10!110;UBERON:0001009!1.53e-09!113;UBERON:0000487!2.16e-07!22;UBERON:0001986!3.36e-07!18;UBERON:0004638!3.36e-07!18;UBERON:0004852!3.36e-07!18;UBERON:0002049!5.35e-07!79;UBERON:0007798!5.35e-07!79;UBERON:0006914!8.18e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0000487;2.13e-07;22!UBERON:0004638;3.71e-07;18!UBERON:0001986;3.71e-07;18!UBERON:0004852;3.71e-07;18!UBERON:0006914;8.59e-07;25 | |ontology_enrichment_uberon_v019=UBERON:0000487;2.13e-07;22!UBERON:0004638;3.71e-07;18!UBERON:0001986;3.71e-07;18!UBERON:0004852;3.71e-07;18!UBERON:0006914;8.59e-07;25 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,8.79e-11,109;UBERON:0001009,5.42e-10,112;UBERON:0002049,1.91e-07,78;UBERON:0007798,1.91e-07,78;UBERON:0000487,2.16e-07,22;UBERON:0004638,3.36e-07,18;UBERON:0001986,3.36e-07,18;UBERON:0004852,3.36e-07,18;UBERON:0006914,8.18e-07,25;UBERON:0004872,8.34e-07,83 | |||
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| ||
|short_description=p2@RAB11A | |short_description=p2@RAB11A | ||
}} | }} |
Latest revision as of 15:55, 18 September 2015
Short description: | p2@RAB11A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RAB11A_5end |
Coexpression cluster: | NA |
Association with transcript: | 41bp_to_ENST00000435304_5end |
EntrezGene: | RAB11A |
HGNC: | 9760 |
UniProt: | P62491 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.35e-10 | 24 |
lining cell | 2.36e-08 | 58 |
barrier cell | 2.36e-08 | 58 |
squamous epithelial cell | 1.79e-07 | 63 |
blood vessel endothelial cell | 3.36e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.36e-07 | 18 |
lymphocyte of B lineage | 7.07e-07 | 24 |
pro-B cell | 7.07e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 8.79e-11 | 109 |
circulatory system | 5.42e-10 | 112 |
vasculature | 1.91e-07 | 78 |
vascular system | 1.91e-07 | 78 |
simple squamous epithelium | 2.16e-07 | 22 |
blood vessel endothelium | 3.36e-07 | 18 |
endothelium | 3.36e-07 | 18 |
cardiovascular system endothelium | 3.36e-07 | 18 |
squamous epithelium | 8.18e-07 | 25 |
splanchnic layer of lateral plate mesoderm | 8.34e-07 | 83 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 1.69e-09 | 137 |
disease of cellular proliferation | 2.82e-08 | 239 |
cancer | 1.66e-07 | 235 |