FFCP PHASE1:Hg19::chr19:984313..984357,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57418 | |EntrezGene=57418 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17956 | |HGNC=17956 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BV38 | |UniProt=Q9BV38 | ||
|association_with_transcript=0bp_to_ENST00000251289,NM_024100,uc002lqm.1,uc002lqn.1,uc010drx.1,uc010dry.1_5end | |association_with_transcript=0bp_to_ENST00000251289,NM_024100,uc002lqm.1,uc002lqn.1,uc010drx.1,uc010dry.1_5end | ||
|cluster_id=chr19:984313..984357,+ | |||
|coexpression_cluster_id=C1357 | |coexpression_cluster_id=C1357 | ||
|description=CAGE_peak_1_at_WDR18_5end | |description=CAGE_peak_1_at_WDR18_5end | ||
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|ontology_enrichment_celltype=CL:0002321!3.67e-22!248;CL:0000220!1.75e-21!246;CL:0000012!1.42e-19!682;CL:0000548!2.90e-19!679;CL:0000004!2.90e-19!679;CL:0000255!2.90e-19!679;CL:0000066!1.01e-17!254;CL:0000144!4.76e-16!625;CL:0002371!1.01e-11!591;CL:0000003!2.08e-11!722;CL:0000222!4.42e-10!119;CL:0000055!2.73e-09!180;CL:0000221!2.39e-08!71;CL:0002078!2.79e-08!44;CL:1000449!3.42e-08!16;CL:0000115!2.17e-07!35;CL:0002681!5.49e-07!13;CL:0002584!5.49e-07!13 | |ontology_enrichment_celltype=CL:0002321!3.67e-22!248;CL:0000220!1.75e-21!246;CL:0000012!1.42e-19!682;CL:0000548!2.90e-19!679;CL:0000004!2.90e-19!679;CL:0000255!2.90e-19!679;CL:0000066!1.01e-17!254;CL:0000144!4.76e-16!625;CL:0002371!1.01e-11!591;CL:0000003!2.08e-11!722;CL:0000222!4.42e-10!119;CL:0000055!2.73e-09!180;CL:0000221!2.39e-08!71;CL:0002078!2.79e-08!44;CL:1000449!3.42e-08!16;CL:0000115!2.17e-07!35;CL:0002681!5.49e-07!13;CL:0002584!5.49e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:1000449;2.33e-08;15!CL:0002681;3.56e-07;12!CL:0002584;3.56e-07;12!CL:0000115;8.30e-07;36 | |ontology_enrichment_celltype_v019=CL:1000449;2.33e-08;15!CL:0002681;3.56e-07;12!CL:0002584;3.56e-07;12!CL:0000115;8.30e-07;36 | ||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.15e-22,250;CL:0000066,1.25e-17,253;CL:0000222,1.77e-10,121;CL:0002078,1.12e-08,45;CL:1000449,2.60e-08,15;CL:0000221,3.89e-08,72;CL:0000115,8.52e-08,36;CL:0002681,4.11e-07,12;CL:0002584,4.11e-07,12 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2531!6.58e-09!51;DOID:0060083!6.58e-09!51;DOID:1240!4.83e-07!39 | |ontology_enrichment_disease=DOID:2531!6.58e-09!51;DOID:0060083!6.58e-09!51;DOID:1240!4.83e-07!39 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:2531,6.58e-09,51;DOID:0060083,6.58e-09,51;DOID:1240,4.83e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0003914!1.72e-11!118;UBERON:0000490!2.13e-09!138;UBERON:0005256!2.19e-08!143;UBERON:0004211!3.42e-08!16;UBERON:0001285!3.42e-08!16;UBERON:0007684!3.42e-08!16;UBERON:0003220!3.42e-08!16;UBERON:0004208!3.42e-08!16;UBERON:0006555!9.61e-08!17;UBERON:0005103!9.61e-08!17;UBERON:0000083!9.61e-08!17;UBERON:0009201!9.61e-08!17;UBERON:0004819!9.61e-08!17;UBERON:0006553!9.61e-08!17;UBERON:0003074!9.61e-08!17;UBERON:0003060!9.61e-08!17;UBERON:0002049!1.90e-07!79;UBERON:0007798!1.90e-07!79;UBERON:0000353!3.15e-07!17;UBERON:0004872!3.59e-07!84;UBERON:0001225!5.49e-07!13;UBERON:0008987!5.49e-07!13;UBERON:0000080!6.30e-07!18;UBERON:0002120!6.30e-07!18;UBERON:0004875!6.30e-07!18;UBERON:0005721!6.30e-07!18;UBERON:0005754!6.30e-07!18;UBERON:0007297!6.30e-07!18;UBERON:0000486!6.70e-07!82;UBERON:0000119!8.01e-07!312;UBERON:0000055!8.06e-07!69 | |ontology_enrichment_uberon=UBERON:0003914!1.72e-11!118;UBERON:0000490!2.13e-09!138;UBERON:0005256!2.19e-08!143;UBERON:0004211!3.42e-08!16;UBERON:0001285!3.42e-08!16;UBERON:0007684!3.42e-08!16;UBERON:0003220!3.42e-08!16;UBERON:0004208!3.42e-08!16;UBERON:0006555!9.61e-08!17;UBERON:0005103!9.61e-08!17;UBERON:0000083!9.61e-08!17;UBERON:0009201!9.61e-08!17;UBERON:0004819!9.61e-08!17;UBERON:0006553!9.61e-08!17;UBERON:0003074!9.61e-08!17;UBERON:0003060!9.61e-08!17;UBERON:0002049!1.90e-07!79;UBERON:0007798!1.90e-07!79;UBERON:0000353!3.15e-07!17;UBERON:0004872!3.59e-07!84;UBERON:0001225!5.49e-07!13;UBERON:0008987!5.49e-07!13;UBERON:0000080!6.30e-07!18;UBERON:0002120!6.30e-07!18;UBERON:0004875!6.30e-07!18;UBERON:0005721!6.30e-07!18;UBERON:0005754!6.30e-07!18;UBERON:0007297!6.30e-07!18;UBERON:0000486!6.70e-07!82;UBERON:0000119!8.01e-07!312;UBERON:0000055!8.06e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0006555;2.33e-08;15!UBERON:0004819;2.33e-08;15!UBERON:0001285;2.33e-08;15!UBERON:0007684;2.33e-08;15!UBERON:0000353;4.17e-08;15!UBERON:0006554;4.43e-08;30!UBERON:0001008;4.43e-08;30!UBERON:0002113;2.50e-07;24!UBERON:0011143;2.50e-07;24!UBERON:0001225;3.56e-07;12!UBERON:0008987;3.56e-07;12!UBERON:0000490;5.88e-07;33 | |ontology_enrichment_uberon_v019=UBERON:0006555;2.33e-08;15!UBERON:0004819;2.33e-08;15!UBERON:0001285;2.33e-08;15!UBERON:0007684;2.33e-08;15!UBERON:0000353;4.17e-08;15!UBERON:0006554;4.43e-08;30!UBERON:0001008;4.43e-08;30!UBERON:0002113;2.50e-07;24!UBERON:0011143;2.50e-07;24!UBERON:0001225;3.56e-07;12!UBERON:0008987;3.56e-07;12!UBERON:0000490;5.88e-07;33 | ||
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 | ||
|short_description=p1@WDR18 | |short_description=p1@WDR18 | ||
}} | }} |
Latest revision as of 02:38, 25 September 2015
Short description: | p1@WDR18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_WDR18_5end |
Coexpression cluster: | C1357_Mesenchymal_Alveolar_Renal_Placental_acantholytic_Tracheal_Bronchial |
Association with transcript: | 0bp_to_ENST00000251289, NM_024100, uc002lqm.1, uc002lqn.1, uc010drx.1, uc010dry.1_5end |
EntrezGene: | WDR18 |
HGNC: | 17956 |
UniProt: | Q9BV38 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.15e-22 | 250 |
epithelial cell | 1.25e-17 | 253 |
mesodermal cell | 1.77e-10 | 121 |
meso-epithelial cell | 1.12e-08 | 45 |
epithelial cell of nephron | 2.60e-08 | 15 |
ectodermal cell | 3.89e-08 | 72 |
endothelial cell | 8.52e-08 | 36 |
kidney cortical cell | 4.11e-07 | 12 |
renal cortical epithelial cell | 4.11e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 2.02e-11 | 117 |
unilaminar epithelium | 3.34e-11 | 148 |
mesenchyme | 8.65e-09 | 160 |
entire embryonic mesenchyme | 8.65e-09 | 160 |
nephron epithelium | 2.60e-08 | 15 |
renal tubule | 2.60e-08 | 15 |
nephron tubule | 2.60e-08 | 15 |
nephron | 2.60e-08 | 15 |
uriniferous tubule | 2.60e-08 | 15 |
nephrogenic mesenchyme | 2.60e-08 | 15 |
parenchyma | 4.94e-08 | 15 |
excretory tube | 7.90e-08 | 16 |
kidney epithelium | 7.90e-08 | 16 |
epithelial vesicle | 1.09e-07 | 78 |
vasculature | 1.12e-07 | 78 |
vascular system | 1.12e-07 | 78 |
splanchnic layer of lateral plate mesoderm | 2.18e-07 | 83 |
cell layer | 3.11e-07 | 309 |
trunk | 3.93e-07 | 199 |
epithelium | 4.06e-07 | 306 |
cortex of kidney | 4.11e-07 | 12 |
renal parenchyma | 4.11e-07 | 12 |
vessel | 4.68e-07 | 68 |
multilaminar epithelium | 5.79e-07 | 83 |
trunk mesenchyme | 7.46e-07 | 122 |
urinary system structure | 8.26e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 6.58e-09 | 51 |
immune system cancer | 6.58e-09 | 51 |
leukemia | 4.83e-07 | 39 |