FFCP PHASE1:Hg19::chr5:134735053..134735067,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9555 | |EntrezGene=9555 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=4740 | |HGNC=4740 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-74bp_to_BC045570_5end | |association_with_transcript=-74bp_to_BC045570_5end | ||
|cluster_id=chr5:134735053..134735067,+ | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_16_at_H2AFY_5end | |description=CAGE_peak_16_at_H2AFY_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002057!1.60e-24!42;CL:0000860!9.81e-24!45;CL:0002194!1.55e-21!63;CL:0000576!1.55e-21!63;CL:0000040!1.55e-21!63;CL:0000559!1.55e-21!63;CL:0000766!2.38e-21!76;CL:0000839!3.49e-21!70;CL:0000557!1.02e-20!71;CL:0002009!1.58e-20!65;CL:0000763!6.63e-15!112;CL:0000049!6.63e-15!112;CL:0000738!2.97e-12!140;CL:0002087!3.25e-12!119;CL:0002031!4.54e-12!124;CL:0002032!3.09e-10!165;CL:0000837!3.09e-10!165;CL:0000037!5.88e-10!172;CL:0000566!5.88e-10!172;CL:0000988!1.14e-08!182;CL:0002393!7.25e-08!9;CL:0002397!7.25e-08!9 | |ontology_enrichment_celltype=CL:0002057!1.60e-24!42;CL:0000860!9.81e-24!45;CL:0002194!1.55e-21!63;CL:0000576!1.55e-21!63;CL:0000040!1.55e-21!63;CL:0000559!1.55e-21!63;CL:0000766!2.38e-21!76;CL:0000839!3.49e-21!70;CL:0000557!1.02e-20!71;CL:0002009!1.58e-20!65;CL:0000763!6.63e-15!112;CL:0000049!6.63e-15!112;CL:0000738!2.97e-12!140;CL:0002087!3.25e-12!119;CL:0002031!4.54e-12!124;CL:0002032!3.09e-10!165;CL:0000837!3.09e-10!165;CL:0000037!5.88e-10!172;CL:0000566!5.88e-10!172;CL:0000988!1.14e-08!182;CL:0002393!7.25e-08!9;CL:0002397!7.25e-08!9 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.99e-21;10!UBERON:0005564;6.99e-21;10 | |ontology_enrichment_development_v019=UBERON:0009117;6.99e-21;10!UBERON:0005564;6.99e-21;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3307;9.18e-26;2 | |ontology_enrichment_disease_v019=DOID:3307;9.18e-26;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3307,9.18e-26,2 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.21e-19!80;UBERON:0001474!2.05e-17!86;UBERON:0002390!1.99e-15!102;UBERON:0003061!1.99e-15!102;UBERON:0004765!4.96e-14!101;UBERON:0001434!4.96e-14!101;UBERON:0002193!6.66e-14!112;UBERON:0002405!2.86e-12!115;UBERON:0002204!3.37e-09!167 | |ontology_enrichment_uberon=UBERON:0002371!1.21e-19!80;UBERON:0001474!2.05e-17!86;UBERON:0002390!1.99e-15!102;UBERON:0003061!1.99e-15!102;UBERON:0004765!4.96e-14!101;UBERON:0001434!4.96e-14!101;UBERON:0002193!6.66e-14!112;UBERON:0002405!2.86e-12!115;UBERON:0002204!3.37e-09!167 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.65e-26;8!UBERON:0003135;4.28e-19;11!UBERON:0000991;1.53e-10;21!UBERON:0003101;4.14e-10;22!UBERON:0000079;4.14e-10;22 | |ontology_enrichment_uberon_v019=UBERON:0000473;8.65e-26;8!UBERON:0003135;4.28e-19;11!UBERON:0000991;1.53e-10;21!UBERON:0003101;4.14e-10;22!UBERON:0000079;4.14e-10;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.65e-26,8;UBERON:0003135,4.28e-19,11;UBERON:0000991,1.53e-10,21;UBERON:0009196,1.53e-10,21;UBERON:0009117,1.53e-10,21;UBERON:0005564,1.53e-10,21;UBERON:0004176,4.14e-10,22;UBERON:0003101,4.14e-10,22;UBERON:0000079,4.14e-10,22 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0.157421562627358,0.393364276848904,0,0.309632246632152,0,0,0,0,0,0,0.553995408531877,0.802177789880567,0.217010870715852,0.223915474239924,0,0.515151135268373,0.290796477559129,0,0.727752183563449,0.929716147622738,0.822335776043652,0.309706370895104,0.28769239232215,0.256160706529101,0.945928919554341,0.344745680736619,0.645484683583826,0,0.188242339542605,0,0.224723484445085,0,0.320929027076094,0,0.659702600373432,0.199463657621632,0.852449501065388,0,0.56738522469114,0,0,0,0.65156653411535,0,0,0.316462387440884,0,0.212604299965044,0.419317291016752,0.112328631146495,0.150176892841506,0.16072558669708,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68507104770311,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0,0.213557388818567,0.211931901159562,0,0,0,0,0.168776332241266,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0.462985512576611,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0.985326475791887,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0.431255149719035,0.256686072559497,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0.647142602455851,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0.178064071293475,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0.456469358066384,0,0,0,0.1605880751037,0,0,0,0,0,0.166849141711909,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0.104602846312333,0,0,0,0.273810757783986,0,0,0.262887354279314,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.0846733320657845,0,0,0.160753148465019,0.275078873194468,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0.372578417648301,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0.219284049578707,0,0,0,0,0.345430341731199,0,0.276516872303462,0,0.132864840313363,0,0,0,0,0,0,0.516644938982447,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,0,0,0,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.126831620387814,0,0,0,0,0,0.535701835878287,0,0.606965604236632,0,0.0887023701626388,0,0,0.0679697329768317,0.197318320688547,0,0,0,0,0,0,0.215927591218621,0,0.0714765441766563,0,0,0.173858272302579,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.203974470572744,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,8.63877159687929,11.5224575967157,0,0,0,0,0,0.0620747142958579,0,0.190941474834495,0,0,0,0,0.0717222053926763,0,0.0814032686109745,0,1.9307228228694,0,0,0,0,0,0,0 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| ||
|short_description=p16@H2AFY | |short_description=p16@H2AFY | ||
}} | }} |
Latest revision as of 18:11, 24 September 2015
Short description: | p16@H2AFY |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_H2AFY_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -74bp_to_BC045570_5end |
EntrezGene: | H2AFY |
HGNC: | 4740 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 8.65e-26 | 8 |
male reproductive organ | 4.28e-19 | 11 |
gonad | 1.53e-10 | 21 |
indifferent external genitalia | 1.53e-10 | 21 |
indifferent gonad | 1.53e-10 | 21 |
gonad primordium | 1.53e-10 | 21 |
external genitalia | 4.14e-10 | 22 |
male organism | 4.14e-10 | 22 |
male reproductive system | 4.14e-10 | 22 |
Ontology term | p-value | n |
---|---|---|
teratoma | 9.18e-26 | 2 |