FFCP PHASE1:Hg19::chr20:9495321..9495340,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=24141 | |EntrezGene=24141 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16097 | |HGNC=16097 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UJQ1 | |UniProt=Q9UJQ1 | ||
|association_with_transcript=50bp_to_ENST00000427562,uc002wni.1,uc010zrc.1_5end | |association_with_transcript=50bp_to_ENST00000427562,uc002wni.1,uc010zrc.1_5end | ||
|cluster_id=chr20:9495321..9495340,+ | |||
|coexpression_cluster_id=C1485 | |coexpression_cluster_id=C1485 | ||
|description=CAGE_peak_8_at_LAMP5_5end | |description=CAGE_peak_8_at_LAMP5_5end | ||
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|ontology_enrichment_celltype=CL:0000784!3.42e-07!3 | |ontology_enrichment_celltype=CL:0000784!3.42e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000784;4.76e-19;3 | |ontology_enrichment_celltype_v019=CL:0000784;4.76e-19;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000784,4.49e-19,3 | |||
|ontology_enrichment_development_v019=UBERON:0010122;4.98e-13;2!UBERON:0006601;1.44e-10;82!UBERON:0006222;2.67e-07;1 | |ontology_enrichment_development_v019=UBERON:0010122;4.98e-13;2!UBERON:0006601;1.44e-10;82!UBERON:0006222;2.67e-07;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4960;1.55e-07;1!DOID:0070004;1.55e-07;1 | |ontology_enrichment_disease_v019=DOID:4960;1.55e-07;1!DOID:0070004;1.55e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:4960,1.55e-07,1;DOID:0070004,1.55e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.22e-47!57;UBERON:0005068!3.22e-47!57;UBERON:0006241!3.22e-47!57;UBERON:0007135!3.22e-47!57;UBERON:0001017!1.42e-43!82;UBERON:0005743!1.02e-42!86;UBERON:0000073!5.93e-41!94;UBERON:0001016!5.93e-41!94;UBERON:0002616!1.79e-38!59;UBERON:0000955!9.30e-36!69;UBERON:0006238!9.30e-36!69;UBERON:0001869!4.72e-35!32;UBERON:0001893!7.01e-35!34;UBERON:0002780!9.48e-35!41;UBERON:0001890!9.48e-35!41;UBERON:0006240!9.48e-35!41;UBERON:0003075!1.87e-34!86;UBERON:0007284!1.87e-34!86;UBERON:0002346!9.55e-34!90;UBERON:0003080!1.07e-33!42;UBERON:0002791!2.92e-33!33;UBERON:0002020!1.56e-32!34;UBERON:0003528!1.56e-32!34;UBERON:0007023!5.58e-32!115;UBERON:0002619!3.37e-25!22;UBERON:0003056!9.56e-25!61;UBERON:0000956!9.00e-24!25;UBERON:0000203!9.00e-24!25;UBERON:0000033!8.72e-23!123;UBERON:0001950!3.86e-22!20;UBERON:0000153!5.00e-22!129;UBERON:0007811!5.00e-22!129;UBERON:0000924!3.37e-21!173;UBERON:0006601!3.37e-21!173;UBERON:0004121!3.38e-21!169;UBERON:0003076!2.70e-14!15;UBERON:0003057!2.70e-14!15;UBERON:0002420!5.70e-13!9;UBERON:0007245!5.70e-13!9;UBERON:0010009!5.70e-13!9;UBERON:0010011!5.70e-13!9;UBERON:0000454!5.70e-13!9;UBERON:0000200!2.98e-11!6;UBERON:0001871!1.32e-10!7;UBERON:0004733!1.76e-10!12;UBERON:0002028!1.76e-10!12;UBERON:0007277!1.76e-10!12;UBERON:0002308!3.76e-10!9;UBERON:0000125!3.76e-10!9;UBERON:0009663!5.97e-10!7;UBERON:0000349!1.26e-09!5;UBERON:0004732!1.61e-09!13;UBERON:0000025!1.73e-09!194;UBERON:0004111!2.20e-09!241;UBERON:0000369!6.92e-09!4;UBERON:0002435!6.92e-09!4;UBERON:0000204!6.92e-09!4;UBERON:0010082!6.92e-09!4;UBERON:0000477!2.43e-08!286;UBERON:0005383!4.14e-07!3;UBERON:0005382!4.14e-07!3 | |ontology_enrichment_uberon=UBERON:0001049!3.22e-47!57;UBERON:0005068!3.22e-47!57;UBERON:0006241!3.22e-47!57;UBERON:0007135!3.22e-47!57;UBERON:0001017!1.42e-43!82;UBERON:0005743!1.02e-42!86;UBERON:0000073!5.93e-41!94;UBERON:0001016!5.93e-41!94;UBERON:0002616!1.79e-38!59;UBERON:0000955!9.30e-36!69;UBERON:0006238!9.30e-36!69;UBERON:0001869!4.72e-35!32;UBERON:0001893!7.01e-35!34;UBERON:0002780!9.48e-35!41;UBERON:0001890!9.48e-35!41;UBERON:0006240!9.48e-35!41;UBERON:0003075!1.87e-34!86;UBERON:0007284!1.87e-34!86;UBERON:0002346!9.55e-34!90;UBERON:0003080!1.07e-33!42;UBERON:0002791!2.92e-33!33;UBERON:0002020!1.56e-32!34;UBERON:0003528!1.56e-32!34;UBERON:0007023!5.58e-32!115;UBERON:0002619!3.37e-25!22;UBERON:0003056!9.56e-25!61;UBERON:0000956!9.00e-24!25;UBERON:0000203!9.00e-24!25;UBERON:0000033!8.72e-23!123;UBERON:0001950!3.86e-22!20;UBERON:0000153!5.00e-22!129;UBERON:0007811!5.00e-22!129;UBERON:0000924!3.37e-21!173;UBERON:0006601!3.37e-21!173;UBERON:0004121!3.38e-21!169;UBERON:0003076!2.70e-14!15;UBERON:0003057!2.70e-14!15;UBERON:0002420!5.70e-13!9;UBERON:0007245!5.70e-13!9;UBERON:0010009!5.70e-13!9;UBERON:0010011!5.70e-13!9;UBERON:0000454!5.70e-13!9;UBERON:0000200!2.98e-11!6;UBERON:0001871!1.32e-10!7;UBERON:0004733!1.76e-10!12;UBERON:0002028!1.76e-10!12;UBERON:0007277!1.76e-10!12;UBERON:0002308!3.76e-10!9;UBERON:0000125!3.76e-10!9;UBERON:0009663!5.97e-10!7;UBERON:0000349!1.26e-09!5;UBERON:0004732!1.61e-09!13;UBERON:0000025!1.73e-09!194;UBERON:0004111!2.20e-09!241;UBERON:0000369!6.92e-09!4;UBERON:0002435!6.92e-09!4;UBERON:0000204!6.92e-09!4;UBERON:0010082!6.92e-09!4;UBERON:0000477!2.43e-08!286;UBERON:0005383!4.14e-07!3;UBERON:0005382!4.14e-07!3 | ||
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|short_description=p8@LAMP5 | |short_description=p8@LAMP5 | ||
}} | }} |
Latest revision as of 17:34, 17 September 2015
Short description: | p8@LAMP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_LAMP5_5end |
Coexpression cluster: | C1485_myeloma_putamen_caudate_nucleus_Dendritic_pons_Lymphatic |
Association with transcript: | 50bp_to_ENST00000427562, uc002wni.1, uc010zrc.1_5end |
EntrezGene: | LAMP5 |
HGNC: | 16097 |
UniProt: | Q9UJQ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 4.49e-19 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 1.55e-07 | 1 |
myeloma | 1.55e-07 | 1 |